Serialized Form

Package org.openscience.nmrshiftdb

Class org.openscience.nmrshiftdb.CaptchaServlet extends javax.servlet.http.HttpServlet implements Serializable

Class org.openscience.nmrshiftdb.InitServlet extends javax.servlet.http.HttpServlet implements Serializable

Class org.openscience.nmrshiftdb.NmrshiftdbServlet extends javax.servlet.http.HttpServlet implements Serializable

Package org.openscience.nmrshiftdb.om

Class org.openscience.nmrshiftdb.om.BaseDBArticle extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

literatureId

int literatureId

The value for the literatureId field

pagesFrom

int pagesFrom

The value for the pagesFrom field

pagesTo

int pagesTo

The value for the pagesTo field

issueNumber

int issueNumber

The value for the issueNumber field

publishedInBook

int publishedInBook

The value for the publishedInBook field

publishedInJournal

int publishedInJournal

The value for the publishedInJournal field

aDBLiteratureRelatedByLiteratureId

DBLiterature aDBLiteratureRelatedByLiteratureId

aDBLiteratureRelatedByPublishedInBook

DBLiterature aDBLiteratureRelatedByPublishedInBook

aDBJournalVolume

DBJournalVolume aDBJournalVolume

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBArticlePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBAtom extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

atomId

int atomId

The value for the atomId field

symbol

java.lang.String symbol

The value for the symbol field

moleculeId

int moleculeId

The value for the moleculeId field

hoseCode

java.lang.String hoseCode

The value for the hoseCode field

hoseCodeWithRings

java.lang.String hoseCodeWithRings

The value for the hoseCodeWithRings field

atomicMass

int atomicMass

The value for the atomicMass field

formalCharge

int formalCharge

The value for the formalCharge field

isAromatic

java.lang.String isAromatic

The value for the isAromatic field

isVisible

java.lang.String isVisible

The value for the isVisible field

hetero

java.lang.String hetero

The value for the hetero field

aDBMolecule

DBMolecule aDBMolecule

collDBCoordinateSet2ds

java.util.List<E> collDBCoordinateSet2ds

Collection to store aggregation of collDBCoordinateSet2ds

lastDBCoordinateSet2dsCriteria

org.apache.torque.util.Criteria lastDBCoordinateSet2dsCriteria

The criteria used to select the current contents of collDBCoordinateSet2ds

collDBCoordinateSet3ds

java.util.List<E> collDBCoordinateSet3ds

Collection to store aggregation of collDBCoordinateSet3ds

lastDBCoordinateSet3dsCriteria

org.apache.torque.util.Criteria lastDBCoordinateSet3dsCriteria

The criteria used to select the current contents of collDBCoordinateSet3ds

collDBCouplingsRelatedByAtomId1

java.util.List<E> collDBCouplingsRelatedByAtomId1

Collection to store aggregation of collDBCouplingsRelatedByAtomId1

lastDBCouplingsRelatedByAtomId1Criteria

org.apache.torque.util.Criteria lastDBCouplingsRelatedByAtomId1Criteria

The criteria used to select the current contents of collDBCouplingsRelatedByAtomId1

collDBCouplingsRelatedByAtomId2

java.util.List<E> collDBCouplingsRelatedByAtomId2

Collection to store aggregation of collDBCouplingsRelatedByAtomId2

lastDBCouplingsRelatedByAtomId2Criteria

org.apache.torque.util.Criteria lastDBCouplingsRelatedByAtomId2Criteria

The criteria used to select the current contents of collDBCouplingsRelatedByAtomId2

collDBBondDBAtoms

java.util.List<E> collDBBondDBAtoms

Collection to store aggregation of collDBBondDBAtoms

lastDBBondDBAtomsCriteria

org.apache.torque.util.Criteria lastDBBondDBAtomsCriteria

The criteria used to select the current contents of collDBBondDBAtoms

collDBSignalDBAtoms

java.util.List<E> collDBSignalDBAtoms

Collection to store aggregation of collDBSignalDBAtoms

lastDBSignalDBAtomsCriteria

org.apache.torque.util.Criteria lastDBSignalDBAtomsCriteria

The criteria used to select the current contents of collDBSignalDBAtoms

collDBIdentifiers

java.util.List<E> collDBIdentifiers

Collection to store aggregation of collDBIdentifiers

lastDBIdentifiersCriteria

org.apache.torque.util.Criteria lastDBIdentifiersCriteria

The criteria used to select the current contents of collDBIdentifiers

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBAtomPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBAuthor extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

authorId

int authorId

The value for the authorId field

surname

java.lang.String surname

The value for the surname field

name

java.lang.String name

The value for the name field

nameTotalSoundex

java.lang.String nameTotalSoundex

The value for the nameTotalSoundex field

nameTotal

java.lang.String nameTotal

The value for the nameTotal field

collIsEditors

java.util.List<E> collIsEditors

Collection to store aggregation of collIsEditors

lastIsEditorsCriteria

org.apache.torque.util.Criteria lastIsEditorsCriteria

The criteria used to select the current contents of collIsEditors

collIsAuthors

java.util.List<E> collIsAuthors

Collection to store aggregation of collIsAuthors

lastIsAuthorsCriteria

org.apache.torque.util.Criteria lastIsAuthorsCriteria

The criteria used to select the current contents of collIsAuthors

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBBond extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

bondId

int bondId

The value for the bondId field

degree

int degree

The value for the degree field

stereo

int stereo

The value for the stereo field

isConfigurationSpecified

java.lang.String isConfigurationSpecified

The value for the isConfigurationSpecified field

isAromatic

java.lang.String isAromatic

The value for the isAromatic field

collDBBondDBAtoms

java.util.List<E> collDBBondDBAtoms

Collection to store aggregation of collDBBondDBAtoms

lastDBBondDBAtomsCriteria

org.apache.torque.util.Criteria lastDBBondDBAtomsCriteria

The criteria used to select the current contents of collDBBondDBAtoms

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

bondId

int bondId

The value for the bondId field

atomId

int atomId

The value for the atomId field

orderNumber

int orderNumber

The value for the orderNumber field

aDBBond

DBBond aDBBond

aDBAtom

DBAtom aDBAtom

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBBondPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBBook extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

literatureId

int literatureId

The value for the literatureId field

aDBLiterature

DBLiterature aDBLiterature

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

publisherId

int publisherId

The value for the publisherId field

literatureId

int literatureId

The value for the literatureId field

year

int year

The value for the year field

aDBPublisher

DBPublisher aDBPublisher

aDBLiterature

DBLiterature aDBLiterature

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBBookmark extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

moleculeId

int moleculeId

The value for the moleculeId field

userId

int userId

The value for the userId field

aDBMolecule

DBMolecule aDBMolecule

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBBookPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBCanonicalName extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

moleculeId

int moleculeId

The value for the moleculeId field

canonicalNameTypeId

int canonicalNameTypeId

The value for the canonicalNameTypeId field

name

java.lang.String name

The value for the name field

nameSoundex

java.lang.String nameSoundex

The value for the nameSoundex field

aDBMolecule

DBMolecule aDBMolecule

aDBCanonicalNameType

DBCanonicalNameType aDBCanonicalNameType

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

canonicalNameTypeId

int canonicalNameTypeId

The value for the canonicalNameTypeId field

canonicalNameType

java.lang.String canonicalNameType

The value for the canonicalNameType field

collDBCanonicalNames

java.util.List<E> collDBCanonicalNames

Collection to store aggregation of collDBCanonicalNames

lastDBCanonicalNamesCriteria

org.apache.torque.util.Criteria lastDBCanonicalNamesCriteria

The criteria used to select the current contents of collDBCanonicalNames

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBChemicalName extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

moleculeId

int moleculeId

The value for the moleculeId field

name

java.lang.String name

The value for the name field

nameSoundex

java.lang.String nameSoundex

The value for the nameSoundex field

aDBMolecule

DBMolecule aDBMolecule

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBCondition extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

conditionId

int conditionId

The value for the conditionId field

value

java.lang.String value

The value for the value field

conditionTypeId

int conditionTypeId

The value for the conditionTypeId field

userId

int userId

The value for the userId field

aDBConditionType

DBConditionType aDBConditionType

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

collDBSpectrumDBConditions

java.util.List<E> collDBSpectrumDBConditions

Collection to store aggregation of collDBSpectrumDBConditions

lastDBSpectrumDBConditionsCriteria

org.apache.torque.util.Criteria lastDBSpectrumDBConditionsCriteria

The criteria used to select the current contents of collDBSpectrumDBConditions

collDBMachines

java.util.List<E> collDBMachines

Collection to store aggregation of collDBMachines

lastDBMachinesCriteria

org.apache.torque.util.Criteria lastDBMachinesCriteria

The criteria used to select the current contents of collDBMachines

collDBSamples

java.util.List<E> collDBSamples

Collection to store aggregation of collDBSamples

lastDBSamplesCriteria

org.apache.torque.util.Criteria lastDBSamplesCriteria

The criteria used to select the current contents of collDBSamples

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBConditionPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBConditionType extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

conditionTypeId

int conditionTypeId

The value for the conditionTypeId field

conditionName

java.lang.String conditionName

The value for the conditionName field

conditionType

java.lang.String conditionType

The value for the conditionType field

dataType

java.lang.String dataType

The value for the dataType field

dictRef

java.lang.String dictRef

The value for the dictRef field

units

java.lang.String units

The value for the units field

required

java.lang.String required

The value for the required field

cmlEntryType

java.lang.String cmlEntryType

The value for the cmlEntryType field

collDBConditions

java.util.List<E> collDBConditions

Collection to store aggregation of collDBConditions

lastDBConditionsCriteria

org.apache.torque.util.Criteria lastDBConditionsCriteria

The criteria used to select the current contents of collDBConditions

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

coordinateSetTypeId

int coordinateSetTypeId

The value for the coordinateSetTypeId field

atomId

int atomId

The value for the atomId field

xCoordinate

double xCoordinate

The value for the xCoordinate field

yCoordinate

double yCoordinate

The value for the yCoordinate field

aDBAtom

DBAtom aDBAtom

aDBCoordinateSetType

DBCoordinateSetType aDBCoordinateSetType

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

coordinateSetTypeId

int coordinateSetTypeId

The value for the coordinateSetTypeId field

atomId

int atomId

The value for the atomId field

xCoordinate

double xCoordinate

The value for the xCoordinate field

yCoordinate

double yCoordinate

The value for the yCoordinate field

zCoordinate

double zCoordinate

The value for the zCoordinate field

aDBAtom

DBAtom aDBAtom

aDBCoordinateSetType

DBCoordinateSetType aDBCoordinateSetType

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

coordinateSetTypeId

int coordinateSetTypeId

The value for the coordinateSetTypeId field

description

byte[] description

The value for the description field

collDBCoordinateSet2ds

java.util.List<E> collDBCoordinateSet2ds

Collection to store aggregation of collDBCoordinateSet2ds

lastDBCoordinateSet2dsCriteria

org.apache.torque.util.Criteria lastDBCoordinateSet2dsCriteria

The criteria used to select the current contents of collDBCoordinateSet2ds

collDBCoordinateSet3ds

java.util.List<E> collDBCoordinateSet3ds

Collection to store aggregation of collDBCoordinateSet3ds

lastDBCoordinateSet3dsCriteria

org.apache.torque.util.Criteria lastDBCoordinateSet3dsCriteria

The criteria used to select the current contents of collDBCoordinateSet3ds

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBCoupling extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

spectrumId

int spectrumId

The value for the spectrumId field

atomId1

int atomId1

The value for the atomId1 field

atomId2

int atomId2

The value for the atomId2 field

constant

double constant

The value for the constant field

aDBAtomRelatedByAtomId1

DBAtom aDBAtomRelatedByAtomId1

aDBAtomRelatedByAtomId2

DBAtom aDBAtomRelatedByAtomId2

aDBSpectrum

DBSpectrum aDBSpectrum

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBGuestbook extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

guestbookId

int guestbookId

The value for the guestbookId field

userId

int userId

The value for the userId field

date

java.util.Date date

The value for the date field

text

java.lang.String text

The value for the text field

valid

java.lang.String valid

The value for the valid field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBIdentifier extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

atomId

int atomId

The value for the atomId field

literatureId

int literatureId

The value for the literatureId field

identifier

java.lang.String identifier

The value for the identifier field

aDBAtom

DBAtom aDBAtom

aDBLiterature

DBLiterature aDBLiterature

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBIsotope extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

spectrumTypeId

int spectrumTypeId

The value for the spectrumTypeId field

axis

int axis

The value for the axis field

elementSymbol

java.lang.String elementSymbol

The value for the elementSymbol field

atomicMass

int atomicMass

The value for the atomicMass field

aDBSpectrumType

DBSpectrumType aDBSpectrumType

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBJournal extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

journalId

int journalId

The value for the journalId field

title

java.lang.String title

The value for the title field

subtitle

java.lang.String subtitle

The value for the subtitle field

ita

java.lang.String ita

The value for the ita field

collDBJournalVolumes

java.util.List<E> collDBJournalVolumes

Collection to store aggregation of collDBJournalVolumes

lastDBJournalVolumesCriteria

org.apache.torque.util.Criteria lastDBJournalVolumesCriteria

The criteria used to select the current contents of collDBJournalVolumes

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBJournalPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBJournalVolume extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

journalVolumeId

int journalVolumeId

The value for the journalVolumeId field

volume

int volume

The value for the volume field

year

int year

The value for the year field

journalId

int journalId

The value for the journalId field

aDBJournal

DBJournal aDBJournal

collDBArticles

java.util.List<E> collDBArticles

Collection to store aggregation of collDBArticles

lastDBArticlesCriteria

org.apache.torque.util.Criteria lastDBArticlesCriteria

The criteria used to select the current contents of collDBArticles

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBKeyword extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

keywordId

int keywordId

The value for the keywordId field

keyword

java.lang.String keyword

The value for the keyword field

keywordSoundex

java.lang.String keywordSoundex

The value for the keywordSoundex field

collDBMoleculeDBKeywords

java.util.List<E> collDBMoleculeDBKeywords

Collection to store aggregation of collDBMoleculeDBKeywords

lastDBMoleculeDBKeywordsCriteria

org.apache.torque.util.Criteria lastDBMoleculeDBKeywordsCriteria

The criteria used to select the current contents of collDBMoleculeDBKeywords

collDBSpectrumDBKeywords

java.util.List<E> collDBSpectrumDBKeywords

Collection to store aggregation of collDBSpectrumDBKeywords

lastDBSpectrumDBKeywordsCriteria

org.apache.torque.util.Criteria lastDBSpectrumDBKeywordsCriteria

The criteria used to select the current contents of collDBSpectrumDBKeywords

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBLabGroup extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

labgroupId

int labgroupId

The value for the labgroupId field

labgroupName

java.lang.String labgroupName

The value for the labgroupName field

leader

int leader

The value for the leader field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

collDBMachines

java.util.List<E> collDBMachines

Collection to store aggregation of collDBMachines

lastDBMachinesCriteria

org.apache.torque.util.Criteria lastDBMachinesCriteria

The criteria used to select the current contents of collDBMachines

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBLiterature extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

literatureId

int literatureId

The value for the literatureId field

title

java.lang.String title

The value for the title field

subtitle

java.lang.String subtitle

The value for the subtitle field

titleTotalSoundex

java.lang.String titleTotalSoundex

The value for the titleTotalSoundex field

titleTotal

java.lang.String titleTotal

The value for the titleTotal field

etAl

java.lang.String etAl

The value for the etAl field

url

java.lang.String url

The value for the url field

doi

java.lang.String doi

The value for the doi field

collDBSpectrumDBLiteratures

java.util.List<E> collDBSpectrumDBLiteratures

Collection to store aggregation of collDBSpectrumDBLiteratures

lastDBSpectrumDBLiteraturesCriteria

org.apache.torque.util.Criteria lastDBSpectrumDBLiteraturesCriteria

The criteria used to select the current contents of collDBSpectrumDBLiteratures

collDBIdentifiers

java.util.List<E> collDBIdentifiers

Collection to store aggregation of collDBIdentifiers

lastDBIdentifiersCriteria

org.apache.torque.util.Criteria lastDBIdentifiersCriteria

The criteria used to select the current contents of collDBIdentifiers

collDBArticlesRelatedByLiteratureId

java.util.List<E> collDBArticlesRelatedByLiteratureId

Collection to store aggregation of collDBArticlesRelatedByLiteratureId

lastDBArticlesRelatedByLiteratureIdCriteria

org.apache.torque.util.Criteria lastDBArticlesRelatedByLiteratureIdCriteria

The criteria used to select the current contents of collDBArticlesRelatedByLiteratureId

collDBArticlesRelatedByPublishedInBook

java.util.List<E> collDBArticlesRelatedByPublishedInBook

Collection to store aggregation of collDBArticlesRelatedByPublishedInBook

lastDBArticlesRelatedByPublishedInBookCriteria

org.apache.torque.util.Criteria lastDBArticlesRelatedByPublishedInBookCriteria

The criteria used to select the current contents of collDBArticlesRelatedByPublishedInBook

collDBBooks

java.util.List<E> collDBBooks

Collection to store aggregation of collDBBooks

lastDBBooksCriteria

org.apache.torque.util.Criteria lastDBBooksCriteria

The criteria used to select the current contents of collDBBooks

collIsEditors

java.util.List<E> collIsEditors

Collection to store aggregation of collIsEditors

lastIsEditorsCriteria

org.apache.torque.util.Criteria lastIsEditorsCriteria

The criteria used to select the current contents of collIsEditors

collIsAuthors

java.util.List<E> collIsAuthors

Collection to store aggregation of collIsAuthors

lastIsAuthorsCriteria

org.apache.torque.util.Criteria lastIsAuthorsCriteria

The criteria used to select the current contents of collIsAuthors

collDBBookDBPublishers

java.util.List<E> collDBBookDBPublishers

Collection to store aggregation of collDBBookDBPublishers

lastDBBookDBPublishersCriteria

org.apache.torque.util.Criteria lastDBBookDBPublishersCriteria

The criteria used to select the current contents of collDBBookDBPublishers

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBMachine extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

machineId

int machineId

The value for the machineId field

name

java.lang.String name

The value for the name field

fieldStrength

int fieldStrength

The value for the fieldStrength field

valid

java.lang.String valid

The value for the valid field

labgroupId

int labgroupId

The value for the labgroupId field

defaultMachine

java.lang.String defaultMachine

The value for the defaultMachine field

measureSelf

java.lang.String measureSelf

The value for the measureSelf field

measureOperator

java.lang.String measureOperator

The value for the measureOperator field

measureChanger

java.lang.String measureChanger

The value for the measureChanger field

aDBLabGroup

DBLabGroup aDBLabGroup

aDBCondition

DBCondition aDBCondition

collDBSamples

java.util.List<E> collDBSamples

Collection to store aggregation of collDBSamples

lastDBSamplesCriteria

org.apache.torque.util.Criteria lastDBSamplesCriteria

The criteria used to select the current contents of collDBSamples

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBMachinePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBMolecule extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

moleculeId

int moleculeId

The value for the moleculeId field

date

java.util.Date date

The value for the date field

casNumber

java.lang.String casNumber

The value for the casNumber field

molecularWeight

double molecularWeight

The value for the molecularWeight field

smilesString

byte[] smilesString

The value for the smilesString field

smilesStringChiral

byte[] smilesStringChiral

The value for the smilesStringChiral field

userId

int userId

The value for the userId field

fp0

long fp0

The value for the fp0 field

fp1

long fp1

The value for the fp1 field

fp2

long fp2

The value for the fp2 field

fp3

long fp3

The value for the fp3 field

fp4

long fp4

The value for the fp4 field

fp5

long fp5

The value for the fp5 field

fp6

long fp6

The value for the fp6 field

fp7

long fp7

The value for the fp7 field

fp8

long fp8

The value for the fp8 field

fp9

long fp9

The value for the fp9 field

fp10

long fp10

The value for the fp10 field

fp11

long fp11

The value for the fp11 field

fp12

long fp12

The value for the fp12 field

fp13

long fp13

The value for the fp13 field

fp14

long fp14

The value for the fp14 field

fp15

long fp15

The value for the fp15 field

dbe

double dbe

The value for the dbe field

sssr

int sssr

The value for the sssr field

sar

int sar

The value for the sar field

comment

byte[] comment

The value for the comment field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

collDBBookmarks

java.util.List<E> collDBBookmarks

Collection to store aggregation of collDBBookmarks

lastDBBookmarksCriteria

org.apache.torque.util.Criteria lastDBBookmarksCriteria

The criteria used to select the current contents of collDBBookmarks

collDBCanonicalNames

java.util.List<E> collDBCanonicalNames

Collection to store aggregation of collDBCanonicalNames

lastDBCanonicalNamesCriteria

org.apache.torque.util.Criteria lastDBCanonicalNamesCriteria

The criteria used to select the current contents of collDBCanonicalNames

collDBWishlists

java.util.List<E> collDBWishlists

Collection to store aggregation of collDBWishlists

lastDBWishlistsCriteria

org.apache.torque.util.Criteria lastDBWishlistsCriteria

The criteria used to select the current contents of collDBWishlists

collDBSpectrums

java.util.List<E> collDBSpectrums

Collection to store aggregation of collDBSpectrums

lastDBSpectrumsCriteria

org.apache.torque.util.Criteria lastDBSpectrumsCriteria

The criteria used to select the current contents of collDBSpectrums

collDBAtoms

java.util.List<E> collDBAtoms

Collection to store aggregation of collDBAtoms

lastDBAtomsCriteria

org.apache.torque.util.Criteria lastDBAtomsCriteria

The criteria used to select the current contents of collDBAtoms

collDBChemicalNames

java.util.List<E> collDBChemicalNames

Collection to store aggregation of collDBChemicalNames

lastDBChemicalNamesCriteria

org.apache.torque.util.Criteria lastDBChemicalNamesCriteria

The criteria used to select the current contents of collDBChemicalNames

collDBMoleculeHyperlinks

java.util.List<E> collDBMoleculeHyperlinks

Collection to store aggregation of collDBMoleculeHyperlinks

lastDBMoleculeHyperlinksCriteria

org.apache.torque.util.Criteria lastDBMoleculeHyperlinksCriteria

The criteria used to select the current contents of collDBMoleculeHyperlinks

collDBMoleculeDBKeywords

java.util.List<E> collDBMoleculeDBKeywords

Collection to store aggregation of collDBMoleculeDBKeywords

lastDBMoleculeDBKeywordsCriteria

org.apache.torque.util.Criteria lastDBMoleculeDBKeywordsCriteria

The criteria used to select the current contents of collDBMoleculeDBKeywords

collDBSamples

java.util.List<E> collDBSamples

Collection to store aggregation of collDBSamples

lastDBSamplesCriteria

org.apache.torque.util.Criteria lastDBSamplesCriteria

The criteria used to select the current contents of collDBSamples

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

moleculeId

int moleculeId

The value for the moleculeId field

keywordId

int keywordId

The value for the keywordId field

aDBMolecule

DBMolecule aDBMolecule

aDBKeyword

DBKeyword aDBKeyword

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

moleculeId

int moleculeId

The value for the moleculeId field

hyperlink

java.lang.String hyperlink

The value for the hyperlink field

description

java.lang.String description

The value for the description field

descriptionSoundex

java.lang.String descriptionSoundex

The value for the descriptionSoundex field

aDBMolecule

DBMolecule aDBMolecule

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBPublisher extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

publisherId

int publisherId

The value for the publisherId field

name

java.lang.String name

The value for the name field

place

java.lang.String place

The value for the place field

collDBBookDBPublishers

java.util.List<E> collDBBookDBPublishers

Collection to store aggregation of collDBBookDBPublishers

lastDBBookDBPublishersCriteria

org.apache.torque.util.Criteria lastDBBookDBPublishersCriteria

The criteria used to select the current contents of collDBBookDBPublishers

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBRawFile extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

rawFileId

int rawFileId

The value for the rawFileId field

sampleId

int sampleId

The value for the sampleId field

url

java.lang.String url

The value for the url field

containedFiles

java.lang.String containedFiles

The value for the containedFiles field

assigned

java.lang.String assigned

The value for the assigned field

aDBSample

DBSample aDBSample

collDBRawFileDBSpectrums

java.util.List<E> collDBRawFileDBSpectrums

Collection to store aggregation of collDBRawFileDBSpectrums

lastDBRawFileDBSpectrumsCriteria

org.apache.torque.util.Criteria lastDBRawFileDBSpectrumsCriteria

The criteria used to select the current contents of collDBRawFileDBSpectrums

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

rawFileId

int rawFileId

The value for the rawFileId field

spectrumId

int spectrumId

The value for the spectrumId field

aDBRawFile

DBRawFile aDBRawFile

aDBSpectrum

DBSpectrum aDBSpectrum

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBReviewGroup extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

reviewgroupId

int reviewgroupId

The value for the reviewgroupId field

reviewgroupName

java.lang.String reviewgroupName

The value for the reviewgroupName field

collDBReviewGroupDBUsers

java.util.List<E> collDBReviewGroupDBUsers

Collection to store aggregation of collDBReviewGroupDBUsers

lastDBReviewGroupDBUsersCriteria

org.apache.torque.util.Criteria lastDBReviewGroupDBUsersCriteria

The criteria used to select the current contents of collDBReviewGroupDBUsers

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

reviewgroupId

int reviewgroupId

The value for the reviewgroupId field

userId

int userId

The value for the userId field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

aDBReviewGroup

DBReviewGroup aDBReviewGroup

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSample extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

sampleId

int sampleId

The value for the sampleId field

usersId

java.lang.String usersId

The value for the usersId field

usersIdComment

java.lang.String usersIdComment

The value for the usersIdComment field

userId

int userId

The value for the userId field

solvent

int solvent

The value for the solvent field

machine

int machine

The value for the machine field

probableStructure

int probableStructure

The value for the probableStructure field

date

java.util.Date date

The value for the date field

otherNuclei

java.lang.String otherNuclei

The value for the otherNuclei field

specialCare

java.lang.String specialCare

The value for the specialCare field

wishedSpectrum

java.lang.String wishedSpectrum

The value for the wishedSpectrum field

otherWishedSpectrum

java.lang.String otherWishedSpectrum

The value for the otherWishedSpectrum field

finished

java.lang.String finished

The value for the finished field

process

java.lang.String process

The value for the process field

attachment

byte[] attachment

The value for the attachment field

attachmentName

java.lang.String attachmentName

The value for the attachmentName field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

aDBCondition

DBCondition aDBCondition

aDBMachine

DBMachine aDBMachine

aDBMolecule

DBMolecule aDBMolecule

collDBRawFiles

java.util.List<E> collDBRawFiles

Collection to store aggregation of collDBRawFiles

lastDBRawFilesCriteria

org.apache.torque.util.Criteria lastDBRawFilesCriteria

The criteria used to select the current contents of collDBRawFiles

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBSamplePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSessions extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

sessions

int sessions

The value for the sessions field

lowestLoadServer

java.lang.String lowestLoadServer

The value for the lowestLoadServer field

sessionsAll

int sessionsAll

The value for the sessionsAll field

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBShift extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

signalId

int signalId

The value for the signalId field

axis

int axis

The value for the axis field

value

float value

The value for the value field

aDBSignal

DBSignal aDBSignal

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBShiftPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSignal extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

signalId

int signalId

The value for the signalId field

intensity

float intensity

The value for the intensity field

multiplicity

java.lang.String multiplicity

The value for the multiplicity field

spectrumId

int spectrumId

The value for the spectrumId field

aDBSpectrum

DBSpectrum aDBSpectrum

collDBShifts

java.util.List<E> collDBShifts

Collection to store aggregation of collDBShifts

lastDBShiftsCriteria

org.apache.torque.util.Criteria lastDBShiftsCriteria

The criteria used to select the current contents of collDBShifts

collDBSignalDBAtoms

java.util.List<E> collDBSignalDBAtoms

Collection to store aggregation of collDBSignalDBAtoms

lastDBSignalDBAtomsCriteria

org.apache.torque.util.Criteria lastDBSignalDBAtomsCriteria

The criteria used to select the current contents of collDBSignalDBAtoms

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

signalId

int signalId

The value for the signalId field

atomId

int atomId

The value for the atomId field

aDBSignal

DBSignal aDBSignal

aDBAtom

DBAtom aDBAtom

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSignalPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSpectrum extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

spectrumId

int spectrumId

The value for the spectrumId field

date

java.util.Date date

The value for the date field

specfile

java.lang.String specfile

The value for the specfile field

simpleSpecfile

java.lang.String simpleSpecfile

The value for the simpleSpecfile field

literature

java.lang.String literature

The value for the literature field

literatureSoundex

java.lang.String literatureSoundex

The value for the literatureSoundex field

reviewFlag

java.lang.String reviewFlag

The value for the reviewFlag field

reviewKey

java.lang.String reviewKey

The value for the reviewKey field

fingerprint

long fingerprint

The value for the fingerprint field

userId

int userId

The value for the userId field

spectrumTypeId

int spectrumTypeId

The value for the spectrumTypeId field

comment

byte[] comment

The value for the comment field

commentSoundex

java.lang.String commentSoundex

The value for the commentSoundex field

moleculeId

int moleculeId

The value for the moleculeId field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

aDBSpectrumType

DBSpectrumType aDBSpectrumType

aDBMolecule

DBMolecule aDBMolecule

collDBSpectrumDBConditions

java.util.List<E> collDBSpectrumDBConditions

Collection to store aggregation of collDBSpectrumDBConditions

lastDBSpectrumDBConditionsCriteria

org.apache.torque.util.Criteria lastDBSpectrumDBConditionsCriteria

The criteria used to select the current contents of collDBSpectrumDBConditions

collDBCouplings

java.util.List<E> collDBCouplings

Collection to store aggregation of collDBCouplings

lastDBCouplingsCriteria

org.apache.torque.util.Criteria lastDBCouplingsCriteria

The criteria used to select the current contents of collDBCouplings

collDBSignals

java.util.List<E> collDBSignals

Collection to store aggregation of collDBSignals

lastDBSignalsCriteria

org.apache.torque.util.Criteria lastDBSignalsCriteria

The criteria used to select the current contents of collDBSignals

collDBUserDBSpectrums

java.util.List<E> collDBUserDBSpectrums

Collection to store aggregation of collDBUserDBSpectrums

lastDBUserDBSpectrumsCriteria

org.apache.torque.util.Criteria lastDBUserDBSpectrumsCriteria

The criteria used to select the current contents of collDBUserDBSpectrums

collDBUserDBSpectrumEdits

java.util.List<E> collDBUserDBSpectrumEdits

Collection to store aggregation of collDBUserDBSpectrumEdits

lastDBUserDBSpectrumEditsCriteria

org.apache.torque.util.Criteria lastDBUserDBSpectrumEditsCriteria

The criteria used to select the current contents of collDBUserDBSpectrumEdits

collDBUserDBSpectrumMarks

java.util.List<E> collDBUserDBSpectrumMarks

Collection to store aggregation of collDBUserDBSpectrumMarks

lastDBUserDBSpectrumMarksCriteria

org.apache.torque.util.Criteria lastDBUserDBSpectrumMarksCriteria

The criteria used to select the current contents of collDBUserDBSpectrumMarks

collDBSpectrumHyperlinks

java.util.List<E> collDBSpectrumHyperlinks

Collection to store aggregation of collDBSpectrumHyperlinks

lastDBSpectrumHyperlinksCriteria

org.apache.torque.util.Criteria lastDBSpectrumHyperlinksCriteria

The criteria used to select the current contents of collDBSpectrumHyperlinks

collDBSpectrumDBKeywords

java.util.List<E> collDBSpectrumDBKeywords

Collection to store aggregation of collDBSpectrumDBKeywords

lastDBSpectrumDBKeywordsCriteria

org.apache.torque.util.Criteria lastDBSpectrumDBKeywordsCriteria

The criteria used to select the current contents of collDBSpectrumDBKeywords

collDBSpectrumDBLiteratures

java.util.List<E> collDBSpectrumDBLiteratures

Collection to store aggregation of collDBSpectrumDBLiteratures

lastDBSpectrumDBLiteraturesCriteria

org.apache.torque.util.Criteria lastDBSpectrumDBLiteraturesCriteria

The criteria used to select the current contents of collDBSpectrumDBLiteratures

collDBRawFileDBSpectrums

java.util.List<E> collDBRawFileDBSpectrums

Collection to store aggregation of collDBRawFileDBSpectrums

lastDBRawFileDBSpectrumsCriteria

org.apache.torque.util.Criteria lastDBRawFileDBSpectrumsCriteria

The criteria used to select the current contents of collDBRawFileDBSpectrums

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

spectrumId

int spectrumId

The value for the spectrumId field

conditionId

int conditionId

The value for the conditionId field

aDBSpectrum

DBSpectrum aDBSpectrum

aDBCondition

DBCondition aDBCondition

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

spectrumId

int spectrumId

The value for the spectrumId field

keywordId

int keywordId

The value for the keywordId field

aDBSpectrum

DBSpectrum aDBSpectrum

aDBKeyword

DBKeyword aDBKeyword

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

spectrumId

int spectrumId

The value for the spectrumId field

literatureId

int literatureId

The value for the literatureId field

aDBSpectrum

DBSpectrum aDBSpectrum

aDBLiterature

DBLiterature aDBLiterature

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

spectrumId

int spectrumId

The value for the spectrumId field

hyperlink

java.lang.String hyperlink

The value for the hyperlink field

description

java.lang.String description

The value for the description field

descriptionSoundex

java.lang.String descriptionSoundex

The value for the descriptionSoundex field

aDBSpectrum

DBSpectrum aDBSpectrum

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumType extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

spectrumTypeId

int spectrumTypeId

The value for the spectrumTypeId field

dimensionality

int dimensionality

The value for the dimensionality field

name

java.lang.String name

The value for the name field

userId

int userId

The value for the userId field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

collDBIsotopes

java.util.List<E> collDBIsotopes

Collection to store aggregation of collDBIsotopes

lastDBIsotopesCriteria

org.apache.torque.util.Criteria lastDBIsotopesCriteria

The criteria used to select the current contents of collDBIsotopes

collDBWishlists

java.util.List<E> collDBWishlists

Collection to store aggregation of collDBWishlists

lastDBWishlistsCriteria

org.apache.torque.util.Criteria lastDBWishlistsCriteria

The criteria used to select the current contents of collDBWishlists

collDBSpectrums

java.util.List<E> collDBSpectrums

Collection to store aggregation of collDBSpectrums

lastDBSpectrumsCriteria

org.apache.torque.util.Criteria lastDBSpectrumsCriteria

The criteria used to select the current contents of collDBSpectrums

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

userId

int userId

The value for the userId field

spectrumId

int spectrumId

The value for the spectrumId field

userSpectrumId

int userSpectrumId

The value for the userSpectrumId field

assignmentDate

java.util.Date assignmentDate

The value for the assignmentDate field

reviewDate

java.util.Date reviewDate

The value for the reviewDate field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

aDBSpectrum

DBSpectrum aDBSpectrum

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

userId

int userId

The value for the userId field

spectrumIdOld

int spectrumIdOld

The value for the spectrumIdOld field

spectrumIdNew

int spectrumIdNew

The value for the spectrumIdNew field

edit

java.util.Date edit

The value for the edit field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

aDBSpectrum

DBSpectrum aDBSpectrum

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

userId

int userId

The value for the userId field

spectrumId

int spectrumId

The value for the spectrumId field

mark

int mark

The value for the mark field

markDate

java.util.Date markDate

The value for the markDate field

comment

java.lang.String comment

The value for the comment field

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

aDBSpectrum

DBSpectrum aDBSpectrum

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseDBWishlist extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

userId

int userId

The value for the userId field

date

java.util.Date date

The value for the date field

spectrumTypeId

int spectrumTypeId

The value for the spectrumTypeId field

moleculeId

int moleculeId

The value for the moleculeId field

aDBSpectrumType

DBSpectrumType aDBSpectrumType

aNmrshiftdbUser

NmrshiftdbUser aNmrshiftdbUser

aDBMolecule

DBMolecule aDBMolecule

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseIsAuthor extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

authorId

int authorId

The value for the authorId field

literatureId

int literatureId

The value for the literatureId field

authorOrder

int authorOrder

The value for the authorOrder field

aDBAuthor

DBAuthor aDBAuthor

aDBLiterature

DBLiterature aDBLiterature

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseIsEditor extends org.apache.torque.om.BaseObject implements Serializable

Serialized Fields

authorId

int authorId

The value for the authorId field

literatureId

int literatureId

The value for the literatureId field

editorOrder

int editorOrder

The value for the editorOrder field

aDBAuthor

DBAuthor aDBAuthor

aDBLiterature

DBLiterature aDBLiterature

alreadyInSave

boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

pks

org.apache.torque.om.SimpleKey[] pks

comboPK

org.apache.torque.om.ComboKey comboPK

Class org.openscience.nmrshiftdb.om.BaseIsEditorPeer extends org.apache.torque.util.BasePeer implements Serializable

Class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser extends org.apache.jetspeed.om.security.turbine.TurbineUser implements Serializable

Serialized Fields

collDBGuestbooks

java.util.List<E> collDBGuestbooks

Collection to store aggregation of collDBGuestbooks

lastDBGuestbooksCriteria

org.apache.torque.util.Criteria lastDBGuestbooksCriteria

The criteria used to select the current contents of collDBGuestbooks

collDBConditions

java.util.List<E> collDBConditions

Collection to store aggregation of collDBConditions

lastDBConditionsCriteria

org.apache.torque.util.Criteria lastDBConditionsCriteria

The criteria used to select the current contents of collDBConditions

collDBSpectrumTypes

java.util.List<E> collDBSpectrumTypes

Collection to store aggregation of collDBSpectrumTypes

lastDBSpectrumTypesCriteria

org.apache.torque.util.Criteria lastDBSpectrumTypesCriteria

The criteria used to select the current contents of collDBSpectrumTypes

collDBMolecules

java.util.List<E> collDBMolecules

Collection to store aggregation of collDBMolecules

lastDBMoleculesCriteria

org.apache.torque.util.Criteria lastDBMoleculesCriteria

The criteria used to select the current contents of collDBMolecules

collDBBookmarks

java.util.List<E> collDBBookmarks

Collection to store aggregation of collDBBookmarks

lastDBBookmarksCriteria

org.apache.torque.util.Criteria lastDBBookmarksCriteria

The criteria used to select the current contents of collDBBookmarks

collDBWishlists

java.util.List<E> collDBWishlists

Collection to store aggregation of collDBWishlists

lastDBWishlistsCriteria

org.apache.torque.util.Criteria lastDBWishlistsCriteria

The criteria used to select the current contents of collDBWishlists

collDBSpectrums

java.util.List<E> collDBSpectrums

Collection to store aggregation of collDBSpectrums

lastDBSpectrumsCriteria

org.apache.torque.util.Criteria lastDBSpectrumsCriteria

The criteria used to select the current contents of collDBSpectrums

collDBUserDBSpectrums

java.util.List<E> collDBUserDBSpectrums

Collection to store aggregation of collDBUserDBSpectrums

lastDBUserDBSpectrumsCriteria

org.apache.torque.util.Criteria lastDBUserDBSpectrumsCriteria

The criteria used to select the current contents of collDBUserDBSpectrums

collDBUserDBSpectrumEdits

java.util.List<E> collDBUserDBSpectrumEdits

Collection to store aggregation of collDBUserDBSpectrumEdits

lastDBUserDBSpectrumEditsCriteria

org.apache.torque.util.Criteria lastDBUserDBSpectrumEditsCriteria

The criteria used to select the current contents of collDBUserDBSpectrumEdits

collDBUserDBSpectrumMarks

java.util.List<E> collDBUserDBSpectrumMarks

Collection to store aggregation of collDBUserDBSpectrumMarks

lastDBUserDBSpectrumMarksCriteria

org.apache.torque.util.Criteria lastDBUserDBSpectrumMarksCriteria

The criteria used to select the current contents of collDBUserDBSpectrumMarks

collDBReviewGroupDBUsers

java.util.List<E> collDBReviewGroupDBUsers

Collection to store aggregation of collDBReviewGroupDBUsers

lastDBReviewGroupDBUsersCriteria

org.apache.torque.util.Criteria lastDBReviewGroupDBUsersCriteria

The criteria used to select the current contents of collDBReviewGroupDBUsers

collDBLabGroups

java.util.List<E> collDBLabGroups

Collection to store aggregation of collDBLabGroups

lastDBLabGroupsCriteria

org.apache.torque.util.Criteria lastDBLabGroupsCriteria

The criteria used to select the current contents of collDBLabGroups

collDBSamples

java.util.List<E> collDBSamples

Collection to store aggregation of collDBSamples

lastDBSamplesCriteria

org.apache.torque.util.Criteria lastDBSamplesCriteria

The criteria used to select the current contents of collDBSamples

Class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer extends org.apache.jetspeed.om.security.turbine.TurbineUserPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBArticle extends BaseDBArticle implements Serializable

Class org.openscience.nmrshiftdb.om.DBArticlePeer extends BaseDBArticlePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBAtom extends BaseDBAtom implements Serializable

Serialized Fields

coords3

DBCoordinateSet3d coords3

coords2

DBCoordinateSet2d coords2

force3d

boolean force3d

couplings

java.util.Vector<E> couplings

Class org.openscience.nmrshiftdb.om.DBAtomPeer extends BaseDBAtomPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBAuthor extends BaseDBAuthor implements Serializable

Class org.openscience.nmrshiftdb.om.DBAuthorPeer extends BaseDBAuthorPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBBond extends BaseDBBond implements Serializable

Class org.openscience.nmrshiftdb.om.DBBondDBAtom extends BaseDBBondDBAtom implements Serializable

Class org.openscience.nmrshiftdb.om.DBBondDBAtomPeer extends BaseDBBondDBAtomPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBBondPeer extends BaseDBBondPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBBook extends BaseDBBook implements Serializable

Class org.openscience.nmrshiftdb.om.DBBookDBPublisher extends BaseDBBookDBPublisher implements Serializable

Class org.openscience.nmrshiftdb.om.DBBookDBPublisherPeer extends BaseDBBookDBPublisherPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBBookmark extends BaseDBBookmark implements Serializable

Class org.openscience.nmrshiftdb.om.DBBookmarkPeer extends BaseDBBookmarkPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBBookPeer extends BaseDBBookPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBCanonicalName extends BaseDBCanonicalName implements Serializable

Class org.openscience.nmrshiftdb.om.DBCanonicalNamePeer extends BaseDBCanonicalNamePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBCanonicalNameType extends BaseDBCanonicalNameType implements Serializable

Class org.openscience.nmrshiftdb.om.DBCanonicalNameTypePeer extends BaseDBCanonicalNameTypePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBChemicalName extends BaseDBChemicalName implements Serializable

Class org.openscience.nmrshiftdb.om.DBChemicalNamePeer extends BaseDBChemicalNamePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBCondition extends BaseDBCondition implements Serializable

Class org.openscience.nmrshiftdb.om.DBConditionPeer extends BaseDBConditionPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBConditionType extends BaseDBConditionType implements Serializable

Serialized Fields

currentValue

java.lang.String currentValue

For saving temporarily the value entered by the user

currentSelectedCondition

DBCondition currentSelectedCondition

For saving temporarily the value selected in the drop-down box by the user

Class org.openscience.nmrshiftdb.om.DBConditionTypePeer extends BaseDBConditionTypePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBCoordinateSet2d extends BaseDBCoordinateSet2d implements Serializable

Class org.openscience.nmrshiftdb.om.DBCoordinateSet2dPeer extends BaseDBCoordinateSet2dPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBCoordinateSet3d extends BaseDBCoordinateSet3d implements Serializable

Class org.openscience.nmrshiftdb.om.DBCoordinateSet3dPeer extends BaseDBCoordinateSet3dPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBCoordinateSetType extends BaseDBCoordinateSetType implements Serializable

Class org.openscience.nmrshiftdb.om.DBCoordinateSetTypePeer extends BaseDBCoordinateSetTypePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBCoupling extends BaseDBCoupling implements Serializable

Class org.openscience.nmrshiftdb.om.DBCouplingPeer extends BaseDBCouplingPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBGuestbook extends BaseDBGuestbook implements Serializable

Class org.openscience.nmrshiftdb.om.DBGuestbookPeer extends BaseDBGuestbookPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBIdentifier extends BaseDBIdentifier implements Serializable

Class org.openscience.nmrshiftdb.om.DBIdentifierPeer extends BaseDBIdentifierPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBIsotope extends BaseDBIsotope implements Serializable

Class org.openscience.nmrshiftdb.om.DBIsotopePeer extends BaseDBIsotopePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBJournal extends BaseDBJournal implements Serializable

Class org.openscience.nmrshiftdb.om.DBJournalPeer extends BaseDBJournalPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBJournalVolume extends BaseDBJournalVolume implements Serializable

Class org.openscience.nmrshiftdb.om.DBJournalVolumePeer extends BaseDBJournalVolumePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBKeyword extends BaseDBKeyword implements Serializable

Serialized Fields

isChoosen

boolean isChoosen

Used to rembemer if a Condition is choosen durig submit

Class org.openscience.nmrshiftdb.om.DBKeywordPeer extends BaseDBKeywordPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBLabGroup extends BaseDBLabGroup implements Serializable

Class org.openscience.nmrshiftdb.om.DBLabGroupPeer extends BaseDBLabGroupPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBLiterature extends BaseDBLiterature implements Serializable

Serialized Fields

type

java.lang.String type

Type of literature as in NmrshiftdbConstants

author

java.lang.String author

The authors like s. a; b. c

etalprov

boolean etalprov

More authors than stated

etalbook

boolean etalbook

In case it's an article in a book more authors than stated

from

int from

In case it's an article the page it starts at

to

int to

In case it's an article the page it end at

journaltitle

java.lang.String journaltitle

In case it's a journal article: The title of the journal

journalsubtitle

java.lang.String journalsubtitle

In case it's a journal article: The subtitle of the journal

choosenJournal

int choosenJournal

In case it's a journal article: The id of a journal already in DB

ita

java.lang.String ita

In case it's a journal article: The title abbreviation

volume

int volume

In case it's a journal article: The volume

year

int year

In case it's a journal article: The year

issue

int issue

In case it's a journal article: The issue

place

java.lang.String place

In case it's a book: The publishing place

publisher

java.lang.String publisher

In case it's a book: The publisher name

choosenPublisher

int choosenPublisher

In case it's a book: The id of publisher already in DB

authorbook

java.lang.String authorbook

In case it's an article in a book: The author like a. b; c. d

titlebook

java.lang.String titlebook

In case it's an article in a book: The title

subtitlebook

java.lang.String subtitlebook

In case it's an article in a book: The subtitle

Class org.openscience.nmrshiftdb.om.DBLiteraturePeer extends BaseDBLiteraturePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBMachine extends BaseDBMachine implements Serializable

Class org.openscience.nmrshiftdb.om.DBMachinePeer extends BaseDBMachinePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBMolecule extends BaseDBMolecule implements Serializable

Serialized Fields

maxsimilarity

double maxsimilarity

Description of the Field

cdkMolecule

org.openscience.cdk.interfaces.IMolecule cdkMolecule

setid

int setid

cdkMoleculeWithoutHs

org.openscience.cdk.interfaces.IMolecule cdkMoleculeWithoutHs

cdkMoleculeWithoutHsAndCount

org.openscience.cdk.interfaces.IMolecule cdkMoleculeWithoutHsAndCount

filename

java.lang.String filename

dbatoms

DBAtom[] dbatoms

fppro

long[] fppro

keywordsVector

java.util.List<E> keywordsVector

autonomeName

java.lang.String autonomeName

allrings

org.openscience.cdk.interfaces.IRingSet allrings

Class org.openscience.nmrshiftdb.om.DBMoleculeDBKeyword extends BaseDBMoleculeDBKeyword implements Serializable

Serialized Fields

dbkeyword

DBKeyword dbkeyword

keyword

java.lang.String keyword

dbmol

int dbmol

Class org.openscience.nmrshiftdb.om.DBMoleculeDBKeywordPeer extends BaseDBMoleculeDBKeywordPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBMoleculeHyperlink extends BaseDBMoleculeHyperlink implements Serializable

Class org.openscience.nmrshiftdb.om.DBMoleculeHyperlinkPeer extends BaseDBMoleculeHyperlinkPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBMoleculePeer extends BaseDBMoleculePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBPublisher extends BaseDBPublisher implements Serializable

Class org.openscience.nmrshiftdb.om.DBPublisherPeer extends BaseDBPublisherPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBRawFile extends BaseDBRawFile implements Serializable

Class org.openscience.nmrshiftdb.om.DBRawFileDBSpectrum extends BaseDBRawFileDBSpectrum implements Serializable

Class org.openscience.nmrshiftdb.om.DBRawFileDBSpectrumPeer extends BaseDBRawFileDBSpectrumPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBRawFilePeer extends BaseDBRawFilePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBReviewGroup extends BaseDBReviewGroup implements Serializable

Class org.openscience.nmrshiftdb.om.DBReviewGroupDBUser extends BaseDBReviewGroupDBUser implements Serializable

Class org.openscience.nmrshiftdb.om.DBReviewGroupDBUserPeer extends BaseDBReviewGroupDBUserPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBReviewGroupPeer extends BaseDBReviewGroupPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSample extends BaseDBSample implements Serializable

Class org.openscience.nmrshiftdb.om.DBSamplePeer extends BaseDBSamplePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSessions extends BaseDBSessions implements Serializable

Class org.openscience.nmrshiftdb.om.DBSessionsPeer extends BaseDBSessionsPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBShift extends BaseDBShift implements Serializable

Class org.openscience.nmrshiftdb.om.DBShiftPeer extends BaseDBShiftPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSignal extends BaseDBSignal implements Serializable

Serialized Fields

shiftArray

DBShift[] shiftArray

This is used temporarily in the similarity calculation

atoms

java.util.List<E> atoms

Class org.openscience.nmrshiftdb.om.DBSignalDBAtom extends BaseDBSignalDBAtom implements Serializable

Class org.openscience.nmrshiftdb.om.DBSignalDBAtomPeer extends BaseDBSignalDBAtomPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSignalPeer extends BaseDBSignalPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrum extends BaseDBSpectrum implements Serializable

serialVersionUID: 1023290511226111144L

Serialized Fields

runData

org.apache.turbine.util.RunData runData

Description of the Field

predict

boolean predict

measurementConditions

java.util.List<E> measurementConditions

similarity

double similarity

searchSignalMap

java.util.Map<K,V> searchSignalMap

intensities

int intensities

options

java.util.Vector<E> options

unusedtext

java.lang.StringBuffer unusedtext

format

java.text.DecimalFormat format

literaturesNew

java.util.List<E> literaturesNew

keywordsVector

java.util.List<E> keywordsVector

otherspectrastringsize

int otherspectrastringsize

Class org.openscience.nmrshiftdb.om.DBSpectrumDBCondition extends BaseDBSpectrumDBCondition implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrumDBConditionPeer extends BaseDBSpectrumDBConditionPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrumDBKeyword extends BaseDBSpectrumDBKeyword implements Serializable

Serialized Fields

keyword

DBKeyword keyword

Class org.openscience.nmrshiftdb.om.DBSpectrumDBKeywordPeer extends BaseDBSpectrumDBKeywordPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrumDBLiterature extends BaseDBSpectrumDBLiterature implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrumDBLiteraturePeer extends BaseDBSpectrumDBLiteraturePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrumHyperlink extends BaseDBSpectrumHyperlink implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrumHyperlinkPeer extends BaseDBSpectrumHyperlinkPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrumPeer extends BaseDBSpectrumPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBSpectrumType extends BaseDBSpectrumType implements Serializable

Serialized Fields

choosen

boolean choosen

Class org.openscience.nmrshiftdb.om.DBSpectrumTypePeer extends BaseDBSpectrumTypePeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBUserDBSpectrum extends BaseDBUserDBSpectrum implements Serializable

Class org.openscience.nmrshiftdb.om.DBUserDBSpectrumEdit extends BaseDBUserDBSpectrumEdit implements Serializable

Class org.openscience.nmrshiftdb.om.DBUserDBSpectrumEditPeer extends BaseDBUserDBSpectrumEditPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBUserDBSpectrumMark extends BaseDBUserDBSpectrumMark implements Serializable

Class org.openscience.nmrshiftdb.om.DBUserDBSpectrumMarkPeer extends BaseDBUserDBSpectrumMarkPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBUserDBSpectrumPeer extends BaseDBUserDBSpectrumPeer implements Serializable

Class org.openscience.nmrshiftdb.om.DBWishlist extends BaseDBWishlist implements Serializable

Class org.openscience.nmrshiftdb.om.DBWishlistPeer extends BaseDBWishlistPeer implements Serializable

Class org.openscience.nmrshiftdb.om.IsAuthor extends BaseIsAuthor implements Serializable

Class org.openscience.nmrshiftdb.om.IsAuthorPeer extends BaseIsAuthorPeer implements Serializable

Class org.openscience.nmrshiftdb.om.IsEditor extends BaseIsEditor implements Serializable

Class org.openscience.nmrshiftdb.om.IsEditorPeer extends BaseIsEditorPeer implements Serializable

Class org.openscience.nmrshiftdb.om.NmrshiftdbUser extends BaseNmrshiftdbUser implements Serializable

Class org.openscience.nmrshiftdb.om.NmrshiftdbUserPeer extends BaseNmrshiftdbUserPeer implements Serializable

Package org.openscience.nmrshiftdb.portlets

Class org.openscience.nmrshiftdb.portlets.BackupPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.BookmarkPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.CheckAssignmentsPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Serialized Fields

reassignmentperiod

long reassignmentperiod

reassignmentvalueshow

java.lang.String reassignmentvalueshow

Class org.openscience.nmrshiftdb.portlets.DetailPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.KeywordPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.MeasuredOrNotPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.MyHomePortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.PredictPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.RestoreSavedSubmittingDataPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.ResultPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Serialized Fields

MOLECULES_PER_PAGE

int MOLECULES_PER_PAGE

PAGES_PER_BROWSE_LINE

int PAGES_PER_BROWSE_LINE

Class org.openscience.nmrshiftdb.portlets.ReviewPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.SearchByNamePortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.SearchBySpectrumPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.SearchByStructurePortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.SearchByWeightPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.SearchHistoryPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.SubmitPortlet extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Class org.openscience.nmrshiftdb.portlets.WebPagePortletWithURLFromRequest extends org.apache.jetspeed.portal.portlets.AbstractPortlet implements Serializable

Serialized Fields

rewriter

org.apache.jetspeed.util.HTMLRewriter rewriter

pageCached

boolean pageCached

Package org.openscience.nmrshiftdb.util

Class org.openscience.nmrshiftdb.util.DatabaseStatistics extends java.lang.Object implements Serializable

Serialized Fields

numberOfUsers

java.lang.String numberOfUsers

numberOfStructures

java.lang.String numberOfStructures

numberOfSpectra

java.lang.String numberOfSpectra

numberOfMeasuredSpectra

java.lang.String numberOfMeasuredSpectra

numberOfCalculatedSpectra

java.lang.String numberOfCalculatedSpectra

Class org.openscience.nmrshiftdb.util.DBSignalComparator extends java.lang.Object implements Serializable

Class org.openscience.nmrshiftdb.util.SubmittingData extends java.lang.Object implements Serializable

Serialized Fields

thisUserId

int thisUserId

sendEmailUserId

int sendEmailUserId

thisURL

java.lang.String thisURL

thisDate

java.util.Date thisDate

role

java.lang.String role

reviews

java.util.ArrayList<E> reviews

reviewFlag

java.lang.String reviewFlag

literatureOld

java.lang.String literatureOld

smilesNonChiralProv

java.lang.String smilesNonChiralProv

smilesChiralProv

java.lang.String smilesChiralProv

isChiralProv

boolean isChiralProv

newAtomNumbersMap

java.util.Map<K,V> newAtomNumbersMap

existingMoleculeId

int existingMoleculeId

spectrumid

int spectrumid

dbmol

int dbmol

enterconstants

boolean enterconstants

literaturecomplete

java.lang.String literaturecomplete

shiftlist

java.lang.String shiftlist

accept

org.apache.torque.om.NumberKey accept

coordinatesetid3

int coordinatesetid3

molcoord

org.openscience.cdk.interfaces.IMolecule molcoord

noreview

boolean noreview

level

int level

keepAssignmentEntries

java.lang.String keepAssignmentEntries

editSpectrum

int editSpectrum

dbatoms

int[] dbatoms

path

java.lang.String path

ringSet

org.openscience.cdk.interfaces.IRingSet ringSet

rawfile

DBRawFile rawfile

showpeakpicker

boolean showpeakpicker

norenumber

boolean norenumber

molecule

java.lang.String molecule

signalstable

java.util.ArrayList<E> signalstable

chemName

java.lang.String chemName

conditions

java.util.List<E> conditions

choosenSpectrumType

DBSpectrumType choosenSpectrumType

moleculeLinks

java.lang.String moleculeLinks

spectrumLinks

java.lang.String spectrumLinks

casNumber

java.lang.String casNumber

molWithHCount

org.openscience.cdk.interfaces.IMolecule molWithHCount

molWithH

org.openscience.cdk.interfaces.IMolecule molWithH

moleculeKeywords

java.lang.String moleculeKeywords

spectrumKeywords

java.lang.String spectrumKeywords

existingMoleculeKeywords

java.util.ArrayList<E> existingMoleculeKeywords

existingSpectrumKeywords

java.util.ArrayList<E> existingSpectrumKeywords

autonomeName

java.lang.String autonomeName

comment

java.lang.String comment

isDoubleBondSpecified

boolean[] isDoubleBondSpecified

doubleBondConfiguration

boolean doubleBondConfiguration

literature

java.util.List<E> literature

identifiers

java.util.Map<K,V> identifiers

measuredOrCalculated

char measuredOrCalculated

literatureForIdentifiers

int literatureForIdentifiers

multis

java.util.Map<K,V> multis

couplings

java.lang.String[][] couplings

fullfillsOrder

int fullfillsOrder

timeformatted

java.lang.String timeformatted

moleculeWith3d

org.openscience.cdk.interfaces.IMolecule moleculeWith3d

Class org.openscience.nmrshiftdb.util.ValuesForVelocityBean extends java.lang.Object implements Serializable

Serialized Fields

statistics

double[] statistics

Description of the Field

statistics2

double[] statistics2

Description of the Field

displayText

java.lang.String displayText

range

java.lang.String range

value

java.lang.Float value

lower

double lower

upper

double upper

nameForElements

java.lang.String nameForElements

isInRange

boolean isInRange

possibleAtomNumbers

java.util.ArrayList<E> possibleAtomNumbers

currentSelectedNumber

java.lang.Integer currentSelectedNumber

multiplicity

java.lang.String multiplicity

delta

java.lang.String delta

identifier

java.lang.String identifier

intensity

java.lang.String intensity

atom

org.openscience.cdk.interfaces.IAtom atom

couplings

java.util.ArrayList<E> couplings

Class org.openscience.nmrshiftdb.util.ValueTriple extends java.lang.Object implements Serializable

Serialized Fields

value1

float value1

Shift

value2

float value2

Intensity, 0=not defined

atoms

java.util.Vector<E> atoms

Atoms assigned to

comparatorValue

float comparatorValue

This is used for sorting signals according to distance to this value via ValueTripleComparator. This value needs not to be set

sortPosition

int sortPosition

This gives the value of the -tags. only used when building submit form

multiplicity

int multiplicity

The multplicity of this signal.

multiplicityString

java.lang.String multiplicityString

Class org.openscience.nmrshiftdb.util.VectorWithSessionBinding extends java.util.ArrayList implements Serializable

Serialized Fields

username

java.lang.String username

Package org.openscience.nmrshiftdb.util.exception

Class org.openscience.nmrshiftdb.util.exception.NmrshiftdbException extends java.lang.Exception implements Serializable