org.openscience.nmrshiftdb.om
Class DBSignal

java.lang.Object
  org.apache.torque.om.BaseObject
      org.openscience.nmrshiftdb.om.BaseDBSignal
          org.openscience.nmrshiftdb.om.DBSignal

All Implemented Interfaces:

java.io.Serializable, org.apache.torque.om.Persistent

public class DBSignal
extends BaseDBSignal
implements org.apache.torque.om.Persistent

You should add additional methods to this class to meet the application requirements. This class will only be generated as long as it does not already exist in the output directory.

Author:

shk3

See Also:

Serialized Form

Field Summary

private java.util.List	atoms
(package private) static java.text.DecimalFormat	format
private DBShift[]	shiftArray This is used temporarily in the similarity calculation

Fields inherited from class org.openscience.nmrshiftdb.om.BaseDBSignal

collDBShifts, collDBSignalDBAtoms

Fields inherited from class org.apache.torque.om.BaseObject

NEW_ID

Constructor Summary

DBSignal()

Method Summary

java.util.List	getAtoms() Gets the atoms of the DBSignal object
java.util.List	getAtoms(java.sql.Connection dbconn) Gets the atoms of the DBSignal object
DBShift[]	getDBShiftsArray() Gets the dBShiftsArray attribute of the DBSignal object
DBShift	getFirstShift() Gets the Shift of the first dimension of the DBSignal object
java.lang.String	getIntensityFormatted() Gets the intensity attribute of the DBSignal object formatted like x.xx.
boolean	hasMultiplicity() Tells if a signal has a multiplictiy (i.
void	setDBShiftsArray(DBShift[] dbshifts) Sets the dBShiftsArray attribute of the DBSignal object

Methods inherited from class org.openscience.nmrshiftdb.om.BaseDBSignal

addDBShift, addDBSignalDBAtom, copy, copyInto, getByName, getByPeerName, getByPosition, getDBShifts, getDBShifts, getDBShifts, getDBShifts, getDBShiftsJoinDBSignal, getDBSignalDBAtoms, getDBSignalDBAtoms, getDBSignalDBAtoms, getDBSignalDBAtoms, getDBSignalDBAtomsJoinDBAtom, getDBSignalDBAtomsJoinDBSignal, getDBSpectrum, getFieldNames, getIntensity, getMultiplicity, getPeer, getPrimaryKey, getSignalId, getSpectrumId, initDBShifts, initDBSignalDBAtoms, save, save, save, setDBSpectrum, setDBSpectrumKey, setIntensity, setMultiplicity, setPrimaryKey, setPrimaryKey, setSignalId, setSpectrumId, toString

Methods inherited from class org.apache.torque.om.BaseObject

equals, equals, getLog, hashCode, isModified, isNew, log, resetModified, setModified, setNew, setPrimaryKey

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.apache.torque.om.Persistent

getPrimaryKey, isModified, isNew, save, save, save, setModified, setNew, setPrimaryKey, setPrimaryKey

Field Detail

format

static java.text.DecimalFormat format

shiftArray

private DBShift[] shiftArray

This is used temporarily in the similarity calculation

atoms

private java.util.List atoms

Constructor Detail

DBSignal

public DBSignal()

Method Detail

setDBShiftsArray

public void setDBShiftsArray(DBShift[] dbshifts)

Sets the dBShiftsArray attribute of the DBSignal object

Parameters:

dbshifts - The new dBShiftsArray value

getAtoms

public java.util.List getAtoms()
                        throws java.lang.Exception

Gets the atoms of the DBSignal object

Returns:

The atoms

Throws:

java.lang.Exception - Something wrong with reading database

getAtoms

public java.util.List getAtoms(java.sql.Connection dbconn)
                        throws java.lang.Exception

Gets the atoms of the DBSignal object

Returns:

The atoms

Throws:

java.lang.Exception - Something wrong with reading database

getFirstShift

public DBShift getFirstShift()
                      throws org.apache.torque.TorqueException

Gets the Shift of the first dimension of the DBSignal object

Returns:

The Shift value

Throws:

java.lang.Exception - DatabaseProblems

org.apache.torque.TorqueException

getDBShiftsArray

public DBShift[] getDBShiftsArray()

Gets the dBShiftsArray attribute of the DBSignal object

Returns:

The dBShiftsArray value

getIntensityFormatted

public java.lang.String getIntensityFormatted()

Gets the intensity attribute of the DBSignal object formatted like x.xx.

Returns:

The intensityFormatted value.

hasMultiplicity

public boolean hasMultiplicity()

Tells if a signal has a multiplictiy (i. e. if !getMulitplicity.equals(""))

Returns:

Does this has a multiplicity?