Index (NMRShiftDB API)

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AbInitioDataset - Class in org.openscience.nmrshiftdb.util: This class holds the information parsed from a Gaussian 98 NMR chemical shift calculation.
AbInitioDataset() - Constructor for class org.openscience.nmrshiftdb.util.AbInitioDataset
absSumAllElements(double[]) - Method in class org.openscience.nmrshiftdb.util.PeakPicker: sum of all absolute element values.
AbstractDaemon - Class in org.openscience.nmrshiftdb.daemons: An abstract daemon.
AbstractDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.AbstractDaemon
AbstractDaemonWithoutServletConfig - Class in org.openscience.nmrshiftdb.daemons: An abstract daemon where run() is supposed to be implemented and not run(ServletConfig).
AbstractDaemonWithoutServletConfig() - Constructor for class org.openscience.nmrshiftdb.daemons.AbstractDaemonWithoutServletConfig
AbstractDaemonWithServletConfig - Class in org.openscience.nmrshiftdb.daemons: An abstract daemon where run(ServletConfig) is supposed to be implemented and not run().
AbstractDaemonWithServletConfig() - Constructor for class org.openscience.nmrshiftdb.daemons.AbstractDaemonWithServletConfig
accept - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
aDBAtom - Variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom
aDBAtom - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
aDBAtom - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
aDBAtom - Variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier
aDBAtom - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom
aDBAtomRelatedByAtomId1 - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling
aDBAtomRelatedByAtomId2 - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling
aDBAuthor - Variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor
aDBAuthor - Variable in class org.openscience.nmrshiftdb.om.BaseIsEditor
aDBBond - Variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom
aDBCanonicalNameType - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName
aDBCondition - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine
aDBCondition - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample
aDBCondition - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition
aDBConditionType - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition
aDBCoordinateSetType - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
aDBCoordinateSetType - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
aDBJournal - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume
aDBJournalVolume - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle
aDBKeyword - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword
aDBKeyword - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword
aDBLabGroup - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine
aDBLiterature - Variable in class org.openscience.nmrshiftdb.om.BaseDBBook
aDBLiterature - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
aDBLiterature - Variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier
aDBLiterature - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature
aDBLiterature - Variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor
aDBLiterature - Variable in class org.openscience.nmrshiftdb.om.BaseIsEditor
aDBLiteratureRelatedByLiteratureId - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle
aDBLiteratureRelatedByPublishedInBook - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle
aDBMachine - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum
aDBMolecule - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist
aDBPublisher - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
aDBRawFile - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum
aDBReviewGroup - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
aDBSample - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile
aDBSignal - Variable in class org.openscience.nmrshiftdb.om.BaseDBShift
aDBSignal - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
aDBSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
aDBSpectrumType - Variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope
aDBSpectrumType - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum
aDBSpectrumType - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist
addAndPlaceHydrogens(IMolecule) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Adds and places hydrogens to a molecule.
addCdkCoords(Connection, IMolecule, int[]) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Adds 3d coords from cdk modelbuilder3d to this molecule.
addDBArticle(DBArticle) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Method called to associate a DBArticle object to this object through the DBArticle foreign key attribute
addDBArticleRelatedByLiteratureId(DBArticle) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Method called to associate a DBArticle object to this object through the DBArticle foreign key attribute
addDBArticleRelatedByPublishedInBook(DBArticle) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Method called to associate a DBArticle object to this object through the DBArticle foreign key attribute
addDBAtom(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBAtom object to this object through the DBAtom foreign key attribute
addDBBondDBAtom(DBBondDBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Method called to associate a DBBondDBAtom object to this object through the DBBondDBAtom foreign key attribute
addDBBondDBAtom(DBBondDBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Method called to associate a DBBondDBAtom object to this object through the DBBondDBAtom foreign key attribute
addDBBook(DBBook) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Method called to associate a DBBook object to this object through the DBBook foreign key attribute
addDBBookDBPublisher(DBBookDBPublisher) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Method called to associate a DBBookDBPublisher object to this object through the DBBookDBPublisher foreign key attribute
addDBBookDBPublisher(DBBookDBPublisher) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Method called to associate a DBBookDBPublisher object to this object through the DBBookDBPublisher foreign key attribute
addDBBookmark(DBBookmark) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBBookmark object to this object through the DBBookmark foreign key attribute
addDBBookmark(DBBookmark) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBBookmark object to this object through the DBBookmark foreign key attribute
addDBCanonicalName(DBCanonicalName) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Method called to associate a DBCanonicalName object to this object through the DBCanonicalName foreign key attribute
addDBCanonicalName(DBCanonicalName) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBCanonicalName object to this object through the DBCanonicalName foreign key attribute
addDBChemicalName(DBChemicalName) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBChemicalName object to this object through the DBChemicalName foreign key attribute
addDBCondition(DBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Method called to associate a DBCondition object to this object through the DBCondition foreign key attribute
addDBCondition(DBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBCondition object to this object through the DBCondition foreign key attribute
addDBCoordinateSet2d(DBCoordinateSet2d) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Method called to associate a DBCoordinateSet2d object to this object through the DBCoordinateSet2d foreign key attribute
addDBCoordinateSet2d(DBCoordinateSet2d) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Method called to associate a DBCoordinateSet2d object to this object through the DBCoordinateSet2d foreign key attribute
addDBCoordinateSet3d(DBCoordinateSet3d) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Method called to associate a DBCoordinateSet3d object to this object through the DBCoordinateSet3d foreign key attribute
addDBCoordinateSet3d(DBCoordinateSet3d) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Method called to associate a DBCoordinateSet3d object to this object through the DBCoordinateSet3d foreign key attribute
addDBCoupling(DBCoupling) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBCoupling object to this object through the DBCoupling foreign key attribute
addDBCouplingRelatedByAtomId1(DBCoupling) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Method called to associate a DBCoupling object to this object through the DBCoupling foreign key attribute
addDBCouplingRelatedByAtomId2(DBCoupling) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Method called to associate a DBCoupling object to this object through the DBCoupling foreign key attribute
addDBGuestbook(DBGuestbook) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBGuestbook object to this object through the DBGuestbook foreign key attribute
addDBIdentifier(DBIdentifier) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Method called to associate a DBIdentifier object to this object through the DBIdentifier foreign key attribute
addDBIdentifier(DBIdentifier) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Method called to associate a DBIdentifier object to this object through the DBIdentifier foreign key attribute
addDBIsotope(DBIsotope) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Method called to associate a DBIsotope object to this object through the DBIsotope foreign key attribute
addDBJournalVolume(DBJournalVolume) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Method called to associate a DBJournalVolume object to this object through the DBJournalVolume foreign key attribute
addDBLabGroup(DBLabGroup) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBLabGroup object to this object through the DBLabGroup foreign key attribute
addDBMachine(DBMachine) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Method called to associate a DBMachine object to this object through the DBMachine foreign key attribute
addDBMachine(DBMachine) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Method called to associate a DBMachine object to this object through the DBMachine foreign key attribute
addDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBMolecule object to this object through the DBMolecule foreign key attribute
addDBMoleculeDBKeyword(DBMoleculeDBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Method called to associate a DBMoleculeDBKeyword object to this object through the DBMoleculeDBKeyword foreign key attribute
addDBMoleculeDBKeyword(DBMoleculeDBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBMoleculeDBKeyword object to this object through the DBMoleculeDBKeyword foreign key attribute
addDBMoleculeHyperlink(DBMoleculeHyperlink) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBMoleculeHyperlink object to this object through the DBMoleculeHyperlink foreign key attribute
addDBRawFile(DBRawFile) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Method called to associate a DBRawFile object to this object through the DBRawFile foreign key attribute
addDBRawFileDBSpectrum(DBRawFileDBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Method called to associate a DBRawFileDBSpectrum object to this object through the DBRawFileDBSpectrum foreign key attribute
addDBRawFileDBSpectrum(DBRawFileDBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBRawFileDBSpectrum object to this object through the DBRawFileDBSpectrum foreign key attribute
addDBReviewGroupDBUser(DBReviewGroupDBUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Method called to associate a DBReviewGroupDBUser object to this object through the DBReviewGroupDBUser foreign key attribute
addDBReviewGroupDBUser(DBReviewGroupDBUser) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBReviewGroupDBUser object to this object through the DBReviewGroupDBUser foreign key attribute
addDBSample(DBSample) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Method called to associate a DBSample object to this object through the DBSample foreign key attribute
addDBSample(DBSample) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Method called to associate a DBSample object to this object through the DBSample foreign key attribute
addDBSample(DBSample) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBSample object to this object through the DBSample foreign key attribute
addDBSample(DBSample) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBSample object to this object through the DBSample foreign key attribute
addDBShift(DBShift) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Method called to associate a DBShift object to this object through the DBShift foreign key attribute
addDBSignal(DBSignal) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBSignal object to this object through the DBSignal foreign key attribute
addDBSignalDBAtom(DBSignalDBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Method called to associate a DBSignalDBAtom object to this object through the DBSignalDBAtom foreign key attribute
addDBSignalDBAtom(DBSignalDBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Method called to associate a DBSignalDBAtom object to this object through the DBSignalDBAtom foreign key attribute
addDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBSpectrum object to this object through the DBSpectrum foreign key attribute
addDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Method called to associate a DBSpectrum object to this object through the DBSpectrum foreign key attribute
addDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBSpectrum object to this object through the DBSpectrum foreign key attribute
addDBSpectrumDBCondition(DBSpectrumDBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Method called to associate a DBSpectrumDBCondition object to this object through the DBSpectrumDBCondition foreign key attribute
addDBSpectrumDBCondition(DBSpectrumDBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBSpectrumDBCondition object to this object through the DBSpectrumDBCondition foreign key attribute
addDBSpectrumDBKeyword(DBSpectrumDBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Method called to associate a DBSpectrumDBKeyword object to this object through the DBSpectrumDBKeyword foreign key attribute
addDBSpectrumDBKeyword(DBSpectrumDBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBSpectrumDBKeyword object to this object through the DBSpectrumDBKeyword foreign key attribute
addDBSpectrumDBLiterature(DBSpectrumDBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Method called to associate a DBSpectrumDBLiterature object to this object through the DBSpectrumDBLiterature foreign key attribute
addDBSpectrumDBLiterature(DBSpectrumDBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBSpectrumDBLiterature object to this object through the DBSpectrumDBLiterature foreign key attribute
addDBSpectrumHyperlink(DBSpectrumHyperlink) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBSpectrumHyperlink object to this object through the DBSpectrumHyperlink foreign key attribute
addDBSpectrumType(DBSpectrumType) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBSpectrumType object to this object through the DBSpectrumType foreign key attribute
addDBUserDBSpectrum(DBUserDBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBUserDBSpectrum object to this object through the DBUserDBSpectrum foreign key attribute
addDBUserDBSpectrum(DBUserDBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBUserDBSpectrum object to this object through the DBUserDBSpectrum foreign key attribute
addDBUserDBSpectrumEdit(DBUserDBSpectrumEdit) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBUserDBSpectrumEdit object to this object through the DBUserDBSpectrumEdit foreign key attribute
addDBUserDBSpectrumEdit(DBUserDBSpectrumEdit) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBUserDBSpectrumEdit object to this object through the DBUserDBSpectrumEdit foreign key attribute
addDBUserDBSpectrumMark(DBUserDBSpectrumMark) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Method called to associate a DBUserDBSpectrumMark object to this object through the DBUserDBSpectrumMark foreign key attribute
addDBUserDBSpectrumMark(DBUserDBSpectrumMark) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBUserDBSpectrumMark object to this object through the DBUserDBSpectrumMark foreign key attribute
addDBWishlist(DBWishlist) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Method called to associate a DBWishlist object to this object through the DBWishlist foreign key attribute
addDBWishlist(DBWishlist) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Method called to associate a DBWishlist object to this object through the DBWishlist foreign key attribute
addDBWishlist(DBWishlist) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Method called to associate a DBWishlist object to this object through the DBWishlist foreign key attribute
addfiles(File, ZipOutputStream, StringBuffer) - Method in class org.openscience.nmrshiftdb.daemons.AssignRobotDaemon
addIsAuthor(IsAuthor) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Method called to associate a IsAuthor object to this object through the IsAuthor foreign key attribute
addIsAuthor(IsAuthor) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Method called to associate a IsAuthor object to this object through the IsAuthor foreign key attribute
addIsEditor(IsEditor) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Method called to associate a IsEditor object to this object through the IsEditor foreign key attribute
addIsEditor(IsEditor) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Method called to associate a IsEditor object to this object through the IsEditor foreign key attribute
ADDITION - Static variable in class org.openscience.nmrshiftdb.util.lDistance
addMark(int, User, String) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Adds a mark to this DBSpectrum.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Add all the columns needed to create a new object.
addSelectColumns(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Add all the columns needed to create a new object.
addSymbolToFormula(SortedMap, String, String, boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Adds an element to a chemical formual string
addToSignalstable(ValueTriple) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Adds a signal (an ValueTriple) to the Signalstable attribute of the SubmittingData object
addToStructureHistory(String, HttpSession) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Adds an mdl file to the StructureHistory
addValuesToSubmittingData(SubmittingData, DBSpectrum, boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Adds values of an existing molecule to a SubmittingData object.
AdminPanel - Class in org.openscience.nmrshiftdb: This class handels some admin tasks
AdminPanel() - Constructor for class org.openscience.nmrshiftdb.AdminPanel
allrings - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
allrings - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
alreadyAttached - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
alreadyids(DBLiterature, DBMolecule) - Method in class org.openscience.nmrshiftdb.portlets.SubmitPortlet: Tells if there are already ids for this molecule and this literature.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBBond: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBBook: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournal: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBPublisher: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSessions: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBShift: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
alreadyInSave - Variable in class org.openscience.nmrshiftdb.om.BaseIsEditor: flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
analyzeAuthor(String) - Static method in class org.openscience.nmrshiftdb.om.DBLiterature: Analyses an author string like a.
analyzeFuzzyCriteria(String, boolean, boolean) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Analyzes a fuzzy search criteria string.
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
aNmrshiftdbUser - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist
applyFilter(double[], double[]) - Method in class org.openscience.nmrshiftdb.util.PeakPicker: apply filter.
ARR_SIZE - Static variable in class org.openscience.nmrshiftdb.util.lDistance
arrayindex(ArrayList<String>, String) - Method in class org.openscience.nmrshiftdb.daemons.AssignRobotDaemon
ArrayUtils - Class in org.openscience.nmrshiftdb.util: Utility class for Arrays
ArrayUtils() - Constructor for class org.openscience.nmrshiftdb.util.ArrayUtils
assignCML(CMLCml) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Doeas an assignemnt for a spectrum and molecule.
assigned - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile: The value for the assigned field
ASSIGNED - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: the column name for the ASSIGNED field
assignment - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
ASSIGNMENT_DATE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: the column name for the ASSIGNMENT_DATE field
assignmentDate - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: The value for the assignmentDate field
AssignRobotDaemon - Class in org.openscience.nmrshiftdb.daemons
AssignRobotDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.AssignRobotDaemon
atom - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
ATOM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the ATOM_ID field
ATOM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: the column name for the ATOM_ID field
ATOM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: the column name for the ATOM_ID field
ATOM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: the column name for the ATOM_ID field
ATOM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: the column name for the ATOM_ID field
ATOM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: the column name for the ATOM_ID field
ATOM_ID_1 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: the column name for the ATOM_ID_1 field
ATOM_ID_2 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: the column name for the ATOM_ID_2 field
ATOMIC_MASS - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the ATOMIC_MASS field
ATOMIC_MASS - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: the column name for the ATOMIC_MASS field
atomicMass - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the atomicMass field
atomicMass - Variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope: The value for the atomicMass field
atomId - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the atomId field
atomId - Variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: The value for the atomId field
atomId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: The value for the atomId field
atomId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: The value for the atomId field
atomId - Variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: The value for the atomId field
atomId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: The value for the atomId field
atomId1 - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling: The value for the atomId1 field
atomId2 - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling: The value for the atomId2 field
atoms - Variable in class org.openscience.nmrshiftdb.om.DBSignal
atoms - Variable in class org.openscience.nmrshiftdb.util.ValueTriple: Atoms assigned to
atomsWithHoseCode - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
AtomUtils - Class in org.openscience.nmrshiftdb.util: Contains some utils for Molecules/Atoms
AtomUtils() - Constructor for class org.openscience.nmrshiftdb.util.AtomUtils: Constructor for the AtomUtils object (private since only static methods)
attachment - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the attachment field
ATTACHMENT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the ATTACHMENT field
ATTACHMENT_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the ATTACHMENT_NAME field
attachmentName - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the attachmentName field
author - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: The authors like s.
AUTHOR_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: the column name for the AUTHOR_ID field
AUTHOR_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: the column name for the AUTHOR_ID field
AUTHOR_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: the column name for the AUTHOR_ID field
AUTHOR_ORDER - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: the column name for the AUTHOR_ORDER field
authorbook - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's an article in a book: The author like a.
authorId - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: The value for the authorId field
authorId - Variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor: The value for the authorId field
authorId - Variable in class org.openscience.nmrshiftdb.om.BaseIsEditor: The value for the authorId field
authorOrder - Variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor: The value for the authorOrder field
autonomeName - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
autonomeName - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
average - Variable in class org.openscience.nmrshiftdb.PredictionTool.ValueBean
axis - Variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope: The value for the axis field
AXIS - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: the column name for the AXIS field
axis - Variable in class org.openscience.nmrshiftdb.om.BaseDBShift: The value for the axis field
AXIS - Static variable in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: the column name for the AXIS field

B

backColor - Variable in class org.openscience.nmrshiftdb.util.Export
BackupPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling the restore of the backup
BackupPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.BackupPortlet
BaseDBArticle - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBArticle() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBArticle
BaseDBArticlePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBArticlePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBArticlePeer
BaseDBAtom - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 21:48:11 CET 2006] You should not use this class directly.
BaseDBAtom() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBAtom
BaseDBAtomPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 21:48:11 CET 2006]
BaseDBAtomPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBAtomPeer
BaseDBAuthor - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBAuthor() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBAuthor
BaseDBAuthorPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBAuthorPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer
BaseDBBond - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBBond() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBond
BaseDBBondDBAtom - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBBondDBAtom() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom
BaseDBBondDBAtomPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBBondDBAtomPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer
BaseDBBondPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBBondPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBondPeer
BaseDBBook - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBBook() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBook
BaseDBBookDBPublisher - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBBookDBPublisher() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
BaseDBBookDBPublisherPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBBookDBPublisherPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer
BaseDBBookmark - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBBookmark() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBookmark
BaseDBBookmarkPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBBookmarkPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer
BaseDBBookPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBBookPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBBookPeer
BaseDBCanonicalName - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBCanonicalName() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCanonicalName
BaseDBCanonicalNamePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBCanonicalNamePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer
BaseDBCanonicalNameType - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBCanonicalNameType() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType
BaseDBCanonicalNameTypePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBCanonicalNameTypePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer
BaseDBChemicalName - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBChemicalName() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBChemicalName
BaseDBChemicalNamePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBChemicalNamePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer
BaseDBCondition - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 23:53:10 CET 2006] You should not use this class directly.
BaseDBCondition() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCondition
BaseDBConditionPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 23:53:10 CET 2006]
BaseDBConditionPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBConditionPeer
BaseDBConditionType - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Mon Feb 18 20:28:53 CET 2008] You should not use this class directly.
BaseDBConditionType() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBConditionType
BaseDBConditionTypePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Mon Feb 18 20:28:53 CET 2008]
BaseDBConditionTypePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer
BaseDBCoordinateSet2d - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBCoordinateSet2d() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
BaseDBCoordinateSet2dPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBCoordinateSet2dPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer
BaseDBCoordinateSet3d - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBCoordinateSet3d() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
BaseDBCoordinateSet3dPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBCoordinateSet3dPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer
BaseDBCoordinateSetType - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBCoordinateSetType() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType
BaseDBCoordinateSetTypePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBCoordinateSetTypePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer
BaseDBCoupling - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBCoupling() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCoupling
BaseDBCouplingPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBCouplingPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer
BaseDBGuestbook - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBGuestbook() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBGuestbook
BaseDBGuestbookPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBGuestbookPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer
BaseDBIdentifier - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBIdentifier() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBIdentifier
BaseDBIdentifierPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBIdentifierPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer
BaseDBIsotope - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBIsotope() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBIsotope
BaseDBIsotopePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBIsotopePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer
BaseDBJournal - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBJournal() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBJournal
BaseDBJournalPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBJournalPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBJournalPeer
BaseDBJournalVolume - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBJournalVolume() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBJournalVolume
BaseDBJournalVolumePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBJournalVolumePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer
BaseDBKeyword - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBKeyword() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBKeyword
BaseDBKeywordPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBKeywordPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer
BaseDBLabGroup - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Mon Jan 08 17:32:19 CET 2007] You should not use this class directly.
BaseDBLabGroup() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBLabGroup
BaseDBLabGroupPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Mon Jan 08 17:32:19 CET 2007]
BaseDBLabGroupPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer
BaseDBLiterature - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBLiterature() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBLiterature
BaseDBLiteraturePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBLiteraturePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
BaseDBMachine - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Thu Dec 20 18:53:40 CET 2007] You should not use this class directly.
BaseDBMachine() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBMachine
BaseDBMachinePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Thu Dec 20 18:53:40 CET 2007]
BaseDBMachinePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBMachinePeer
BaseDBMolecule - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Fri Nov 28 18:04:08 GMT 2008] You should not use this class directly.
BaseDBMolecule() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBMolecule
BaseDBMoleculeDBKeyword - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBMoleculeDBKeyword() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword
BaseDBMoleculeDBKeywordPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBMoleculeDBKeywordPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer
BaseDBMoleculeHyperlink - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBMoleculeHyperlink() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink
BaseDBMoleculeHyperlinkPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBMoleculeHyperlinkPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer
BaseDBMoleculePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Fri Nov 28 18:04:08 GMT 2008]
BaseDBMoleculePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer
BaseDBPublisher - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBPublisher() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBPublisher
BaseDBPublisherPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBPublisherPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer
BaseDBRawFile - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Wed Nov 22 10:38:56 CET 2006] You should not use this class directly.
BaseDBRawFile() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBRawFile
BaseDBRawFileDBSpectrum - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBRawFileDBSpectrum() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum
BaseDBRawFileDBSpectrumPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBRawFileDBSpectrumPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer
BaseDBRawFilePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Wed Nov 22 10:38:56 CET 2006]
BaseDBRawFilePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer
BaseDBReviewGroup - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBReviewGroup() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBReviewGroup
BaseDBReviewGroupDBUser - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBReviewGroupDBUser() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
BaseDBReviewGroupDBUserPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBReviewGroupDBUserPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer
BaseDBReviewGroupPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBReviewGroupPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer
BaseDBSample - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Thu Dec 07 14:43:53 CET 2006] You should not use this class directly.
BaseDBSample() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSample
BaseDBSamplePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Thu Dec 07 14:43:53 CET 2006]
BaseDBSamplePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
BaseDBSessions - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBSessions() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSessions
BaseDBSessionsPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBSessionsPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer
BaseDBShift - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBShift() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBShift
BaseDBShiftPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBShiftPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBShiftPeer
BaseDBSignal - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBSignal() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSignal
BaseDBSignalDBAtom - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBSignalDBAtom() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom
BaseDBSignalDBAtomPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBSignalDBAtomPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer
BaseDBSignalPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBSignalPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSignalPeer
BaseDBSpectrum - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Mon Dec 01 12:28:17 GMT 2008] You should not use this class directly.
BaseDBSpectrum() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrum
BaseDBSpectrumDBCondition - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBSpectrumDBCondition() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition
BaseDBSpectrumDBConditionPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBSpectrumDBConditionPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer
BaseDBSpectrumDBKeyword - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBSpectrumDBKeyword() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword
BaseDBSpectrumDBKeywordPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBSpectrumDBKeywordPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer
BaseDBSpectrumDBLiterature - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBSpectrumDBLiterature() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature
BaseDBSpectrumDBLiteraturePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBSpectrumDBLiteraturePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer
BaseDBSpectrumHyperlink - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBSpectrumHyperlink() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink
BaseDBSpectrumHyperlinkPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBSpectrumHyperlinkPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer
BaseDBSpectrumPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Mon Dec 01 12:28:17 GMT 2008]
BaseDBSpectrumPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer
BaseDBSpectrumType - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBSpectrumType() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumType
BaseDBSpectrumTypePeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBSpectrumTypePeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer
BaseDBUserDBSpectrum - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBUserDBSpectrum() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
BaseDBUserDBSpectrumEdit - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Mon Dec 01 12:28:17 GMT 2008] You should not use this class directly.
BaseDBUserDBSpectrumEdit() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
BaseDBUserDBSpectrumEditPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Mon Dec 01 12:28:17 GMT 2008]
BaseDBUserDBSpectrumEditPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer
BaseDBUserDBSpectrumMark - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBUserDBSpectrumMark() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
BaseDBUserDBSpectrumMarkPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBUserDBSpectrumMarkPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer
BaseDBUserDBSpectrumPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBUserDBSpectrumPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer
BaseDBWishlist - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseDBWishlist() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBWishlist
BaseDBWishlistPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseDBWishlistPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer
BaseIsAuthor - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseIsAuthor() - Constructor for class org.openscience.nmrshiftdb.om.BaseIsAuthor
BaseIsAuthorPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseIsAuthorPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer
BaseIsEditor - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006] You should not use this class directly.
BaseIsEditor() - Constructor for class org.openscience.nmrshiftdb.om.BaseIsEditor
BaseIsEditorPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
BaseIsEditorPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseIsEditorPeer
BaseNmrshiftdbUser - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 23:53:10 CET 2006] You should not use this class directly.
BaseNmrshiftdbUser() - Constructor for class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser
BaseNmrshiftdbUserPeer - Class in org.openscience.nmrshiftdb.om: This class was autogenerated by Torque on: [Tue Nov 21 23:53:10 CET 2006]
BaseNmrshiftdbUserPeer() - Constructor for class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer
BOND_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: the column name for the BOND_ID field
BOND_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: the column name for the BOND_ID field
bondId - Variable in class org.openscience.nmrshiftdb.om.BaseDBBond: The value for the bondId field
bondId - Variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: The value for the bondId field
BookmarkPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling the display of bookmarks
BookmarkPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.BookmarkPortlet
bool - Variable in class org.openscience.nmrshiftdb.util.StringAndStringAndBoolean
BROWSE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
btades - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
buildConditionContext(Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.SearchConditionAction: Default behavior for the portlet action.
buildConfigureContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsBrowserAction: Build the configure state content for this portlet.
buildConfigureContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsUpdateAction: Build the configure state content for this portlet.
buildConfigureContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.UserReviewgroupUpdateAction: Build the configure state content for this portlet.
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBArticle) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBBondDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBBond) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBBookDBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBBookmark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBBook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBCanonicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBCanonicalNameType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBChemicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBConditionType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBCoordinateSet2d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBCoordinateSet3d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBCoordinateSetType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBCoupling) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBGuestbook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBIdentifier) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBIsotope) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBJournal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBJournalVolume) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBLabGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBMachine) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBMoleculeDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBMoleculeHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBMolecule) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBRawFileDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBRawFile) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBReviewGroupDBUser) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBReviewGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSample) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSessions) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBShift) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSignalDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSignal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSpectrumDBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSpectrumDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSpectrumDBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSpectrumHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Build a Criteria object from an ObjectKey
buildCriteria(DBSpectrumType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBUserDBSpectrumEdit) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBUserDBSpectrumMark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBUserDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Build a Criteria object from an ObjectKey
buildCriteria(DBWishlist) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Build a Criteria object from an ObjectKey
buildCriteria(IsAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Build a Criteria object from an ObjectKey
buildCriteria(IsEditor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Build a Criteria object from the data object for this peer
buildCriteria(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: Build a Criteria object from an ObjectKey
buildGuestbookContext(Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.GuestbookPortletAction: Default behavior for the portlet action.
BuildHomeDaemon - Class in org.openscience.nmrshiftdb.daemons: A daemon that builds a homepage to nmrshiftdbhtml.
BuildHomeDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.BuildHomeDaemon
BuildHoseCodeTableDaemon - Class in org.openscience.nmrshiftdb.daemons: A daemon that builds a heap hose code table.
BuildHoseCodeTableDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.BuildHoseCodeTableDaemon
buildMaximizedContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsBrowserAction: Build the maximized state content for this portlet.
buildMaximizedContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsUpdateAction: Build the maximized state content for this portlet.
buildMaximizedContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.UserReviewgroupUpdateAction: Build the maximized state content for this portlet.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.ChooseSpectrumTypeAction: Default behavior for the portlet action.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.GuestbookPortletAction: Default behavior for the portlet action.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction: Default behavior for the portlet action.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction: Default behavior for the portlet action.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.SearchConditionAction: Default behavior for the portlet action.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsBrowserAction: Build the normal state content for this portlet.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsUpdateAction: Build the normal state content for this portlet.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.UserReviewgroupUpdateAction: Build the normal state content for this portlet.
buildNormalContext(VelocityPortlet, Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.WishlistPortletAction: Default behavior for the portlet action.
buildOrderContext(Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
buildOrderContext(Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
BuildSdfDaemon - Class in org.openscience.nmrshiftdb.daemons: A daemon that builds the sdf file
BuildSdfDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.BuildSdfDaemon
BuildSvmDaemon - Class in org.openscience.nmrshiftdb.daemons: A daemon that builds the sdf file
BuildSvmDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.BuildSvmDaemon
buildTypesContext(Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.ChooseSpectrumTypeAction
buildUserRoleContext(VelocityPortlet, Context, RunData, String) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.UserReviewgroupUpdateAction: Build the context for a role browser for a specific user.
buildWishlistContext(Context, RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.WishlistPortletAction: Default behavior for the portlet action.

C

CALCULATEDONLY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
CANNAME - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
CANONICAL_NAME_TYPE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: the column name for the CANONICAL_NAME_TYPE field
CANONICAL_NAME_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: the column name for the CANONICAL_NAME_TYPE_ID field
CANONICAL_NAME_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: the column name for the CANONICAL_NAME_TYPE_ID field
canonicalNameType - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: The value for the canonicalNameType field
canonicalNameTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: The value for the canonicalNameTypeId field
canonicalNameTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: The value for the canonicalNameTypeId field
CaptchaServiceSingleton - Class in org.openscience.nmrshiftdb.util
CaptchaServiceSingleton() - Constructor for class org.openscience.nmrshiftdb.util.CaptchaServiceSingleton
CaptchaServlet - Class in org.openscience.nmrshiftdb
CaptchaServlet() - Constructor for class org.openscience.nmrshiftdb.CaptchaServlet
CAS_NUMBER - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the CAS_NUMBER field
casNumber - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the casNumber field
casNumber - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset: The Chemical Abstracts Services (CAS) Number of this molecule
CASNUMBER - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
casNumber - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
cdkmol - Variable in class org.openscience.nmrshiftdb.util.Export
cdkMolecule - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
cdkMoleculeWithoutHs - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
cdkMoleculeWithoutHsAndCount - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
cdkmolwithh - Variable in class org.openscience.nmrshiftdb.util.Export
CELLS_KEY - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.WishlistPortletAction: a key for the context.
CHANGE - Static variable in class org.openscience.nmrshiftdb.util.lDistance
CHANGE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
checkAgainstCdk(DBMolecule) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Checks if the values of the C spectra of a certain DBMolecule are inside the CDK prediction range.
CheckAssignmentsPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling the reassignment of reviews
CheckAssignmentsPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.CheckAssignmentsPortlet
checkIfOnlyOneStructure(IMolecule) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: This method checks if a cdk molecule object only contains one or multiple structures
chemicalName - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset: A chemical Name for this molecule
CHEMNAME - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
chemName - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
CHEMNAMEPUBCHEM - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
choosen - Variable in class org.openscience.nmrshiftdb.om.DBSpectrumType
choosenJournal - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's a journal article: The id of a journal already in DB
choosenPublisher - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's a book: The id of publisher already in DB
choosenSpectrumType - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
ChooseSpectrumTypeAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets: Handles actions for the GuestbookPortlet
ChooseSpectrumTypeAction() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.ChooseSpectrumTypeAction
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: A class that can be returned by this peer.
CLASS_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: A class that can be returned by this peer.
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBArticleMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBAtomMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBAuthorMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBBondDBAtomMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBBondMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBBookDBPublisherMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBBookMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBBookmarkMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameTypeMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBChemicalNameMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBConditionMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBConditionTypeMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet2dMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet3dMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBCoordinateSetTypeMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBCouplingMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBGuestbookMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBIdentifierMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBIsotopeMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBJournalMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBJournalVolumeMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBKeywordMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBLabGroupMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBLiteratureMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBMachineMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBMoleculeDBKeywordMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBMoleculeHyperlinkMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBMoleculeMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBPublisherMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBRawFileDBSpectrumMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBRawFileMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBReviewGroupDBUserMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBReviewGroupMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSampleMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSessionsMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBShiftMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSignalDBAtomMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSignalMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBConditionMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBKeywordMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBLiteratureMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumHyperlinkMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumTypeMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumEditMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMarkMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.DBWishlistMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.IsAuthorMapBuilder: The name of this class
CLASS_NAME - Static variable in class org.openscience.nmrshiftdb.om.map.IsEditorMapBuilder: The name of this class
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: A class that can be returned by this peer.
CLASSNAME_DEFAULT - Static variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: A class that can be returned by this peer.
cleanString(String, String) - Static method in class org.openscience.nmrshiftdb.util.G98Shifts: Removes commas and brackets from a String
clearAssignments() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Removes all assignments from signalstable.
CML_ENTRY_TYPE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: the column name for the CML_ENTRY_TYPE field
CML_NAMESPACE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
cmlEntryType - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The value for the cmlEntryType field
collDBArticles - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Collection to store aggregation of collDBArticles
collDBArticlesRelatedByLiteratureId - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Collection to store aggregation of collDBArticlesRelatedByLiteratureId
collDBArticlesRelatedByPublishedInBook - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Collection to store aggregation of collDBArticlesRelatedByPublishedInBook
collDBAtoms - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBAtoms
collDBBondDBAtoms - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: Collection to store aggregation of collDBBondDBAtoms
collDBBondDBAtoms - Variable in class org.openscience.nmrshiftdb.om.BaseDBBond: Collection to store aggregation of collDBBondDBAtoms
collDBBookDBPublishers - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Collection to store aggregation of collDBBookDBPublishers
collDBBookDBPublishers - Variable in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Collection to store aggregation of collDBBookDBPublishers
collDBBookmarks - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBBookmarks
collDBBookmarks - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBBookmarks
collDBBooks - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Collection to store aggregation of collDBBooks
collDBCanonicalNames - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Collection to store aggregation of collDBCanonicalNames
collDBCanonicalNames - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBCanonicalNames
collDBChemicalNames - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBChemicalNames
collDBConditions - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Collection to store aggregation of collDBConditions
collDBConditions - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBConditions
collDBCoordinateSet2ds - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: Collection to store aggregation of collDBCoordinateSet2ds
collDBCoordinateSet2ds - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Collection to store aggregation of collDBCoordinateSet2ds
collDBCoordinateSet3ds - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: Collection to store aggregation of collDBCoordinateSet3ds
collDBCoordinateSet3ds - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Collection to store aggregation of collDBCoordinateSet3ds
collDBCouplings - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBCouplings
collDBCouplingsRelatedByAtomId1 - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: Collection to store aggregation of collDBCouplingsRelatedByAtomId1
collDBCouplingsRelatedByAtomId2 - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: Collection to store aggregation of collDBCouplingsRelatedByAtomId2
collDBGuestbooks - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBGuestbooks
collDBIdentifiers - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: Collection to store aggregation of collDBIdentifiers
collDBIdentifiers - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Collection to store aggregation of collDBIdentifiers
collDBIsotopes - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Collection to store aggregation of collDBIsotopes
collDBJournalVolumes - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournal: Collection to store aggregation of collDBJournalVolumes
collDBLabGroups - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBLabGroups
collDBMachines - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: Collection to store aggregation of collDBMachines
collDBMachines - Variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Collection to store aggregation of collDBMachines
collDBMoleculeDBKeywords - Variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Collection to store aggregation of collDBMoleculeDBKeywords
collDBMoleculeDBKeywords - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBMoleculeDBKeywords
collDBMoleculeHyperlinks - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBMoleculeHyperlinks
collDBMolecules - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBMolecules
collDBRawFileDBSpectrums - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Collection to store aggregation of collDBRawFileDBSpectrums
collDBRawFileDBSpectrums - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBRawFileDBSpectrums
collDBRawFiles - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: Collection to store aggregation of collDBRawFiles
collDBReviewGroupDBUsers - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Collection to store aggregation of collDBReviewGroupDBUsers
collDBReviewGroupDBUsers - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBReviewGroupDBUsers
collDBSamples - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: Collection to store aggregation of collDBSamples
collDBSamples - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: Collection to store aggregation of collDBSamples
collDBSamples - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBSamples
collDBSamples - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBSamples
collDBShifts - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: Collection to store aggregation of collDBShifts
collDBSignalDBAtoms - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: Collection to store aggregation of collDBSignalDBAtoms
collDBSignalDBAtoms - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: Collection to store aggregation of collDBSignalDBAtoms
collDBSignals - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBSignals
collDBSpectrumDBConditions - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: Collection to store aggregation of collDBSpectrumDBConditions
collDBSpectrumDBConditions - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBSpectrumDBConditions
collDBSpectrumDBKeywords - Variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Collection to store aggregation of collDBSpectrumDBKeywords
collDBSpectrumDBKeywords - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBSpectrumDBKeywords
collDBSpectrumDBLiteratures - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Collection to store aggregation of collDBSpectrumDBLiteratures
collDBSpectrumDBLiteratures - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBSpectrumDBLiteratures
collDBSpectrumHyperlinks - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBSpectrumHyperlinks
collDBSpectrums - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBSpectrums
collDBSpectrums - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Collection to store aggregation of collDBSpectrums
collDBSpectrums - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBSpectrums
collDBSpectrumTypes - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBSpectrumTypes
collDBUserDBSpectrumEdits - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBUserDBSpectrumEdits
collDBUserDBSpectrumEdits - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBUserDBSpectrumEdits
collDBUserDBSpectrumMarks - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBUserDBSpectrumMarks
collDBUserDBSpectrumMarks - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBUserDBSpectrumMarks
collDBUserDBSpectrums - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Collection to store aggregation of collDBUserDBSpectrums
collDBUserDBSpectrums - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBUserDBSpectrums
collDBWishlists - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Collection to store aggregation of collDBWishlists
collDBWishlists - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Collection to store aggregation of collDBWishlists
collDBWishlists - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Collection to store aggregation of collDBWishlists
collIsAuthors - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Collection to store aggregation of collIsAuthors
collIsAuthors - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Collection to store aggregation of collIsAuthors
collIsEditors - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Collection to store aggregation of collIsEditors
collIsEditors - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Collection to store aggregation of collIsEditors
colsnumber - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBShift
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor
comboPK - Variable in class org.openscience.nmrshiftdb.om.BaseIsEditor
comment - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the comment field
COMMENT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the COMMENT field
comment - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the comment field
COMMENT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the COMMENT field
comment - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: The value for the comment field
COMMENT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: the column name for the COMMENT field
COMMENT - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
comment - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
COMMENT_SOUNDEX - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the COMMENT_SOUNDEX field
commentSoundex - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the commentSoundex field
COMP_LEN - Static variable in class org.openscience.nmrshiftdb.util.lDistance
compact - Variable in class org.openscience.nmrshiftdb.util.Export
comparatorValue - Variable in class org.openscience.nmrshiftdb.util.ValueTriple: This is used for sorting signals according to distance to this value via ValueTripleComparator.
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction.LocalComparator
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.util.DBSignalComparator: The compare method
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.util.DBSpectrumComparator: The compare method
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.util.IdentifierComparator: The compare method
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.util.SignalComparator: The compare method
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.util.StringAndIntComparator: The compare method
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.util.ValueTripleComparator: The compare method
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.util.ValueTripleComparator2: The compare method
compare(Object, Object) - Method in class org.openscience.nmrshiftdb.util.VfvbComparator: The compare method
CONDITION - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
CONDITION_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: the column name for the CONDITION_ID field
CONDITION_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: the column name for the CONDITION_ID field
CONDITION_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: the column name for the CONDITION_NAME field
CONDITION_TYPE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: the column name for the CONDITION_TYPE field
CONDITION_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: the column name for the CONDITION_TYPE_ID field
CONDITION_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: the column name for the CONDITION_TYPE_ID field
conditionId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: The value for the conditionId field
conditionId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: The value for the conditionId field
conditionName - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The value for the conditionName field
CONDITIONS - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
conditions - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
CONDITIONS_CALCULATED_KEY - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.SearchConditionAction
CONDITIONS_MEASURED_KEY - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.SearchConditionAction
conditionType - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The value for the conditionType field
conditionTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: The value for the conditionTypeId field
conditionTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The value for the conditionTypeId field
confidencelimits - Static variable in class org.openscience.nmrshiftdb.PredictionTool
config - Variable in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
constant - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling: The value for the constant field
CONSTANT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: the column name for the CONSTANT field
CONTAINED_FILES - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: the column name for the CONTAINED_FILES field
containedFiles - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile: The value for the containedFiles field
contains(S) - Method in class org.openscience.nmrshiftdb.util.OneToManyTable
containsDoubleBondsSpecified() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Tells if any double bond is specified in this molecule
CONTEXT_GROUP - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
CONTEXT_GROUPS - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
CONTEXT_PERMISSION - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
CONTEXT_PERMISSIONS - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
CONTEXT_ROLE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
CONTEXT_ROLES - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
CONTEXT_SELECTED - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
CONTEXT_USER - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
CONTEXT_USERS - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
COORDINATE_SET_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: the column name for the COORDINATE_SET_TYPE_ID field
COORDINATE_SET_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: the column name for the COORDINATE_SET_TYPE_ID field
COORDINATE_SET_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: the column name for the COORDINATE_SET_TYPE_ID field
coordinatesetid3 - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
coordinateSetTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: The value for the coordinateSetTypeId field
coordinateSetTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: The value for the coordinateSetTypeId field
coordinateSetTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: The value for the coordinateSetTypeId field
coords2 - Variable in class org.openscience.nmrshiftdb.om.DBAtom
coords3 - Variable in class org.openscience.nmrshiftdb.om.DBAtom
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Makes a copy of this object.
copy() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Makes a copy of this object.
copyInto(DBArticle) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle
copyInto(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom
copyInto(DBAuthor) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor
copyInto(DBBond) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond
copyInto(DBBondDBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom
copyInto(DBBook) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook
copyInto(DBBookDBPublisher) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
copyInto(DBBookmark) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark
copyInto(DBCanonicalName) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName
copyInto(DBCanonicalNameType) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType
copyInto(DBChemicalName) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName
copyInto(DBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition
copyInto(DBConditionType) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType
copyInto(DBCoordinateSet2d) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
copyInto(DBCoordinateSet3d) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
copyInto(DBCoordinateSetType) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType
copyInto(DBCoupling) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling
copyInto(DBGuestbook) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook
copyInto(DBIdentifier) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier
copyInto(DBIsotope) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope
copyInto(DBJournal) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal
copyInto(DBJournalVolume) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume
copyInto(DBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword
copyInto(DBLabGroup) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup
copyInto(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature
copyInto(DBMachine) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine
copyInto(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule
copyInto(DBMoleculeDBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword
copyInto(DBMoleculeHyperlink) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink
copyInto(DBPublisher) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher
copyInto(DBRawFile) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile
copyInto(DBRawFileDBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum
copyInto(DBReviewGroup) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup
copyInto(DBReviewGroupDBUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
copyInto(DBSample) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample
copyInto(DBSessions) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions
copyInto(DBShift) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift
copyInto(DBSignal) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal
copyInto(DBSignalDBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom
copyInto(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum
copyInto(DBSpectrumDBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition
copyInto(DBSpectrumDBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword
copyInto(DBSpectrumDBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature
copyInto(DBSpectrumHyperlink) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink
copyInto(DBSpectrumType) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType
copyInto(DBUserDBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
copyInto(DBUserDBSpectrumEdit) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
copyInto(DBUserDBSpectrumMark) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
copyInto(DBWishlist) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist
copyInto(IsAuthor) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor
copyInto(IsEditor) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor
countOccurences(String, char) - Method in class org.openscience.nmrshiftdb.daemons.AssignRobotDaemon
couplings - Variable in class org.openscience.nmrshiftdb.om.DBAtom
couplings - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
couplings - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
crossvalidateHose(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel
currentSelectedCondition - Variable in class org.openscience.nmrshiftdb.om.DBConditionType: For saving temporarily the value selected in the drop-down box by the user
currentSelectedNumber - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
currentValue - Variable in class org.openscience.nmrshiftdb.om.DBConditionType: For saving temporarily the value entered by the user

D

data - Variable in class org.openscience.nmrshiftdb.util.UrlTool
DATA_TYPE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: the column name for the DATA_TYPE field
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: the default database name for this class
DATABASE_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: the default database name for this class
DatabaseStatistics - Class in org.openscience.nmrshiftdb.util: This class contains the statistics displayed in the top.vm
DatabaseStatistics() - Constructor for class org.openscience.nmrshiftdb.util.DatabaseStatistics: Constructor for the DatabaseStatistics object.
dataType - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The value for the dataType field
date - Variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: The value for the date field
DATE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: the column name for the DATE field
date - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the date field
DATE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the DATE field
date - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the date field
DATE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the DATE field
date - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the date field
DATE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the DATE field
date - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist: The value for the date field
DATE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: the column name for the DATE field
DBArticle - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBArticle() - Constructor for class org.openscience.nmrshiftdb.om.DBArticle
DBArticleMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBArticleMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBArticleMapBuilder
DBArticlePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBArticlePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBArticlePeer
DBAtom - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBAtom() - Constructor for class org.openscience.nmrshiftdb.om.DBAtom: Constructor for the DBAtom object
DBAtom(IAtom, IAtomContainer, int, String, String, boolean) - Constructor for class org.openscience.nmrshiftdb.om.DBAtom: Constructor for the DBAtom object.
DBAtomMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 21:48:11 CET 2006]
DBAtomMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBAtomMapBuilder
DBAtomPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBAtomPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBAtomPeer
dbatoms - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
dbatoms - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
DBAuthor - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBAuthor() - Constructor for class org.openscience.nmrshiftdb.om.DBAuthor
DBAuthorMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBAuthorMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBAuthorMapBuilder
DBAuthorPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBAuthorPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBAuthorPeer
DBBond - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBond() - Constructor for class org.openscience.nmrshiftdb.om.DBBond: Constructor for the DBBond object
DBBond(IBond, boolean) - Constructor for class org.openscience.nmrshiftdb.om.DBBond: Constructor for the DBBond object
DBBondDBAtom - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBondDBAtom() - Constructor for class org.openscience.nmrshiftdb.om.DBBondDBAtom
DBBondDBAtomMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBBondDBAtomMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBBondDBAtomMapBuilder
DBBondDBAtomPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBondDBAtomPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBBondDBAtomPeer
DBBondMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBBondMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBBondMapBuilder
DBBondPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBondPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBBondPeer
DBBook - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBook() - Constructor for class org.openscience.nmrshiftdb.om.DBBook
DBBookDBPublisher - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBookDBPublisher() - Constructor for class org.openscience.nmrshiftdb.om.DBBookDBPublisher
DBBookDBPublisherMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBBookDBPublisherMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBBookDBPublisherMapBuilder
DBBookDBPublisherPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBookDBPublisherPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBBookDBPublisherPeer
DBBookMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBBookMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBBookMapBuilder
DBBookmark - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBookmark(int, int) - Constructor for class org.openscience.nmrshiftdb.om.DBBookmark: Constructor for the DBBookmark object
DBBookmark() - Constructor for class org.openscience.nmrshiftdb.om.DBBookmark: Constructor for the DBBookmark object
DBBookmarkMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBBookmarkMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBBookmarkMapBuilder
DBBookmarkPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBookmarkPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBBookmarkPeer
DBBookPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBBookPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBBookPeer
DBCanonicalName - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCanonicalName() - Constructor for class org.openscience.nmrshiftdb.om.DBCanonicalName
DBCanonicalName(String, int) - Constructor for class org.openscience.nmrshiftdb.om.DBCanonicalName
DBCanonicalName(String, int, int) - Constructor for class org.openscience.nmrshiftdb.om.DBCanonicalName
DBCanonicalNameMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBCanonicalNameMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBCanonicalNameMapBuilder
DBCanonicalNamePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCanonicalNamePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBCanonicalNamePeer
DBCanonicalNameType - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCanonicalNameType() - Constructor for class org.openscience.nmrshiftdb.om.DBCanonicalNameType
DBCanonicalNameTypeMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBCanonicalNameTypeMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBCanonicalNameTypeMapBuilder
DBCanonicalNameTypePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCanonicalNameTypePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBCanonicalNameTypePeer
DBChemicalName - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBChemicalName() - Constructor for class org.openscience.nmrshiftdb.om.DBChemicalName: Constructor for the DBChemicalName object
DBChemicalName(int, String) - Constructor for class org.openscience.nmrshiftdb.om.DBChemicalName: Constructor for the DBChemicalName object
DBChemicalNameMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBChemicalNameMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBChemicalNameMapBuilder
DBChemicalNamePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBChemicalNamePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBChemicalNamePeer
DBCondition - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCondition() - Constructor for class org.openscience.nmrshiftdb.om.DBCondition
DBConditionMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 23:53:10 CET 2006]
DBConditionMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBConditionMapBuilder
DBConditionPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBConditionPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBConditionPeer
DBConditionType - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBConditionType() - Constructor for class org.openscience.nmrshiftdb.om.DBConditionType
DBConditionTypeMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Mon Feb 18 20:28:53 CET 2008]
DBConditionTypeMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBConditionTypeMapBuilder
DBConditionTypePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBConditionTypePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBConditionTypePeer
DBCoordinateSet2d - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCoordinateSet2d() - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSet2d: Constructor for the DBCoordinateSet2d object
DBCoordinateSet2d(double, double, int) - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSet2d: Constructor for the DBCoordinateSet2d object
DBCoordinateSet2dMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBCoordinateSet2dMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBCoordinateSet2dMapBuilder
DBCoordinateSet2dPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCoordinateSet2dPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSet2dPeer
DBCoordinateSet3d - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCoordinateSet3d() - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSet3d: Constructor for the DBCoordinateSet3d object.
DBCoordinateSet3d(double, double, double, int) - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSet3d: Constructor for the DBCoordinateSet3d object.
DBCoordinateSet3d(double, double, double, int, int) - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSet3d: Constructor for the DBCoordinateSet3d object.
DBCoordinateSet3dMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBCoordinateSet3dMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBCoordinateSet3dMapBuilder
DBCoordinateSet3dPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCoordinateSet3dPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSet3dPeer
DBCoordinateSetType - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCoordinateSetType() - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSetType
DBCoordinateSetTypeMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBCoordinateSetTypeMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBCoordinateSetTypeMapBuilder
DBCoordinateSetTypePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCoordinateSetTypePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBCoordinateSetTypePeer
DBCoupling - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCoupling() - Constructor for class org.openscience.nmrshiftdb.om.DBCoupling: Constructor for the DBCoupling object.
DBCoupling(int, int, int, double) - Constructor for class org.openscience.nmrshiftdb.om.DBCoupling: Constructor for the DBCoupling object.
DBCouplingMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBCouplingMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBCouplingMapBuilder
DBCouplingPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBCouplingPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBCouplingPeer
dbe - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the dbe field
DBE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the DBE field
DBE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
DBE_RINGS - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
DBGuestbook - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBGuestbook() - Constructor for class org.openscience.nmrshiftdb.om.DBGuestbook
DBGuestbookMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBGuestbookMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBGuestbookMapBuilder
DBGuestbookPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBGuestbookPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBGuestbookPeer
DBIdentifier - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBIdentifier() - Constructor for class org.openscience.nmrshiftdb.om.DBIdentifier: Constructor for the DBIdentifier object
DBIdentifier(int, DBLiterature, String) - Constructor for class org.openscience.nmrshiftdb.om.DBIdentifier: Constructor for the DBIdentifier object
DBIdentifierMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBIdentifierMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBIdentifierMapBuilder
DBIdentifierPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBIdentifierPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBIdentifierPeer
DBIsotope - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBIsotope() - Constructor for class org.openscience.nmrshiftdb.om.DBIsotope
DBIsotopeMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBIsotopeMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBIsotopeMapBuilder
DBIsotopePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBIsotopePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBIsotopePeer
DBJournal - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBJournal() - Constructor for class org.openscience.nmrshiftdb.om.DBJournal
DBJournalMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBJournalMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBJournalMapBuilder
DBJournalPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBJournalPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBJournalPeer
DBJournalVolume - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBJournalVolume() - Constructor for class org.openscience.nmrshiftdb.om.DBJournalVolume
DBJournalVolumeMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBJournalVolumeMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBJournalVolumeMapBuilder
DBJournalVolumePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBJournalVolumePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBJournalVolumePeer
DBKeyword - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBKeyword() - Constructor for class org.openscience.nmrshiftdb.om.DBKeyword
dbkeyword - Variable in class org.openscience.nmrshiftdb.om.DBMoleculeDBKeyword
DBKeywordMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBKeywordMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBKeywordMapBuilder
DBKeywordPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBKeywordPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBKeywordPeer
DBLabGroup - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBLabGroup() - Constructor for class org.openscience.nmrshiftdb.om.DBLabGroup
DBLabGroupMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBLabGroupMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBLabGroupMapBuilder
DBLabGroupPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBLabGroupPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBLabGroupPeer
DBLiterature - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBLiterature() - Constructor for class org.openscience.nmrshiftdb.om.DBLiterature: Constructor for the DBLiterature object
DBLiterature(String) - Constructor for class org.openscience.nmrshiftdb.om.DBLiterature: Constructor for the DBLiterature object.
DBLiteratureMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBLiteratureMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBLiteratureMapBuilder
DBLiteraturePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBLiteraturePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBLiteraturePeer
DBMachine - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBMachine() - Constructor for class org.openscience.nmrshiftdb.om.DBMachine
DBMachineMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Thu Dec 20 18:53:40 CET 2007]
DBMachineMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBMachineMapBuilder
DBMachinePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBMachinePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBMachinePeer
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBArticleMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBAtomMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBAuthorMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBBondDBAtomMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBBondMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBBookDBPublisherMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBBookMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBBookmarkMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameTypeMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBChemicalNameMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBConditionMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBConditionTypeMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet2dMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet3dMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBCoordinateSetTypeMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBCouplingMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBGuestbookMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBIdentifierMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBIsotopeMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBJournalMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBJournalVolumeMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBKeywordMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBLabGroupMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBLiteratureMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBMachineMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBMoleculeDBKeywordMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBMoleculeHyperlinkMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBMoleculeMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBPublisherMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBRawFileDBSpectrumMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBRawFileMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBReviewGroupDBUserMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBReviewGroupMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSampleMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSessionsMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBShiftMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSignalDBAtomMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSignalMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBConditionMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBKeywordMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBLiteratureMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumHyperlinkMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBSpectrumTypeMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumEditMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMarkMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.DBWishlistMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.IsAuthorMapBuilder: The database map.
dbMap - Variable in class org.openscience.nmrshiftdb.om.map.IsEditorMapBuilder: The database map.
dbmol - Variable in class org.openscience.nmrshiftdb.om.DBMoleculeDBKeyword
dbmol - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
DBMolecule - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBMolecule() - Constructor for class org.openscience.nmrshiftdb.om.DBMolecule: Constructor for the DBMolecule object
DBMolecule(IMolecule, IMolecule, Date, String, int, String, String, boolean, int, MFAnalyser, IRingSet, int) - Constructor for class org.openscience.nmrshiftdb.om.DBMolecule: Constructor for the DBMolecule object
DBMoleculeDBKeyword - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBMoleculeDBKeyword() - Constructor for class org.openscience.nmrshiftdb.om.DBMoleculeDBKeyword: Constructor for the DBMoleculeDBKeyword object
DBMoleculeDBKeyword(String, int) - Constructor for class org.openscience.nmrshiftdb.om.DBMoleculeDBKeyword: Constructor for the DBMoleculeDBKeyword object
DBMoleculeDBKeywordMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBMoleculeDBKeywordMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBMoleculeDBKeywordMapBuilder
DBMoleculeDBKeywordPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBMoleculeDBKeywordPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBMoleculeDBKeywordPeer
DBMoleculeHyperlink - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBMoleculeHyperlink() - Constructor for class org.openscience.nmrshiftdb.om.DBMoleculeHyperlink: Constructor for the DBMoleculeHyperlink object
DBMoleculeHyperlink(int, String, String) - Constructor for class org.openscience.nmrshiftdb.om.DBMoleculeHyperlink: Constructor for the DBMoleculeHyperlinkPeer object
DBMoleculeHyperlinkMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBMoleculeHyperlinkMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBMoleculeHyperlinkMapBuilder
DBMoleculeHyperlinkPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBMoleculeHyperlinkPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBMoleculeHyperlinkPeer
DBMoleculeMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Fri Nov 28 18:04:08 GMT 2008]
DBMoleculeMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBMoleculeMapBuilder
DBMoleculePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBMoleculePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBMoleculePeer
DBPublisher - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBPublisher() - Constructor for class org.openscience.nmrshiftdb.om.DBPublisher
DBPublisherMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBPublisherMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBPublisherMapBuilder
DBPublisherPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBPublisherPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBPublisherPeer
DBRawFile - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBRawFile() - Constructor for class org.openscience.nmrshiftdb.om.DBRawFile
DBRawFileDBSpectrum - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBRawFileDBSpectrum() - Constructor for class org.openscience.nmrshiftdb.om.DBRawFileDBSpectrum
DBRawFileDBSpectrum(int, int) - Constructor for class org.openscience.nmrshiftdb.om.DBRawFileDBSpectrum
DBRawFileDBSpectrumMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBRawFileDBSpectrumMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBRawFileDBSpectrumMapBuilder
DBRawFileDBSpectrumPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBRawFileDBSpectrumPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBRawFileDBSpectrumPeer
DBRawFileMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Wed Nov 22 10:38:56 CET 2006]
DBRawFileMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBRawFileMapBuilder
DBRawFilePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBRawFilePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBRawFilePeer
DBReviewGroup - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBReviewGroup() - Constructor for class org.openscience.nmrshiftdb.om.DBReviewGroup
DBReviewGroupDBUser - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBReviewGroupDBUser() - Constructor for class org.openscience.nmrshiftdb.om.DBReviewGroupDBUser
DBReviewGroupDBUserMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBReviewGroupDBUserMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBReviewGroupDBUserMapBuilder
DBReviewGroupDBUserPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBReviewGroupDBUserPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBReviewGroupDBUserPeer
DBReviewGroupMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBReviewGroupMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBReviewGroupMapBuilder
DBReviewGroupPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBReviewGroupPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBReviewGroupPeer
DBSample - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSample() - Constructor for class org.openscience.nmrshiftdb.om.DBSample
DBSampleMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Thu Dec 07 14:43:53 CET 2006]
DBSampleMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSampleMapBuilder
DBSamplePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSamplePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSamplePeer
DBSessions - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSessions() - Constructor for class org.openscience.nmrshiftdb.om.DBSessions
DBSessionsMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBSessionsMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSessionsMapBuilder
DBSessionsPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSessionsPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSessionsPeer
DBShift - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBShift() - Constructor for class org.openscience.nmrshiftdb.om.DBShift
DBShiftMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBShiftMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBShiftMapBuilder
DBShiftPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBShiftPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBShiftPeer
DBSignal - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSignal() - Constructor for class org.openscience.nmrshiftdb.om.DBSignal
DBSignalComparator - Class in org.openscience.nmrshiftdb.util: This is implememtation of Comparator used for sorting DBSignals according to shift1
DBSignalComparator() - Constructor for class org.openscience.nmrshiftdb.util.DBSignalComparator
DBSignalDBAtom - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSignalDBAtom() - Constructor for class org.openscience.nmrshiftdb.om.DBSignalDBAtom
DBSignalDBAtomMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBSignalDBAtomMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSignalDBAtomMapBuilder
DBSignalDBAtomPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSignalDBAtomPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSignalDBAtomPeer
DBSignalMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBSignalMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSignalMapBuilder
DBSignalPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSignalPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSignalPeer
DBSpectrum - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrum() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrum
DBSpectrumComparator - Class in org.openscience.nmrshiftdb.util: This is implememtation of Comparator used for sorting DBSpectra according to similarity, the larger similarity goes first
DBSpectrumComparator() - Constructor for class org.openscience.nmrshiftdb.util.DBSpectrumComparator
DBSpectrumDBCondition - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumDBCondition() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumDBCondition
DBSpectrumDBConditionMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBSpectrumDBConditionMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSpectrumDBConditionMapBuilder
DBSpectrumDBConditionPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumDBConditionPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumDBConditionPeer
DBSpectrumDBKeyword - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumDBKeyword() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumDBKeyword
DBSpectrumDBKeywordMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBSpectrumDBKeywordMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSpectrumDBKeywordMapBuilder
DBSpectrumDBKeywordPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumDBKeywordPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumDBKeywordPeer
DBSpectrumDBLiterature - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumDBLiterature() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumDBLiterature
DBSpectrumDBLiteratureMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBSpectrumDBLiteratureMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSpectrumDBLiteratureMapBuilder
DBSpectrumDBLiteraturePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumDBLiteraturePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumDBLiteraturePeer
DBSpectrumHyperlink - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumHyperlink() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumHyperlink
DBSpectrumHyperlinkMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBSpectrumHyperlinkMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSpectrumHyperlinkMapBuilder
DBSpectrumHyperlinkPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumHyperlinkPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumHyperlinkPeer
DBSpectrumMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Mon Dec 01 12:28:17 GMT 2008]
DBSpectrumMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSpectrumMapBuilder
DBSpectrumPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumPeer
DBSpectrumType - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumType() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumType
DBSpectrumType(int, String, int) - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumType
DBSpectrumTypeMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBSpectrumTypeMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBSpectrumTypeMapBuilder
DBSpectrumTypePeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBSpectrumTypePeer() - Constructor for class org.openscience.nmrshiftdb.om.DBSpectrumTypePeer
DBUserDBSpectrum - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBUserDBSpectrum() - Constructor for class org.openscience.nmrshiftdb.om.DBUserDBSpectrum: Constructor for the DBUserDBSpectrum object
DBUserDBSpectrum(int, TurbineUser, Date) - Constructor for class org.openscience.nmrshiftdb.om.DBUserDBSpectrum: Constructor for the DBUserDBSpectrum object
DBUserDBSpectrumEdit - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBUserDBSpectrumEdit() - Constructor for class org.openscience.nmrshiftdb.om.DBUserDBSpectrumEdit
DBUserDBSpectrumEditMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Mon Dec 01 12:28:17 GMT 2008]
DBUserDBSpectrumEditMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumEditMapBuilder
DBUserDBSpectrumEditPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBUserDBSpectrumEditPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBUserDBSpectrumEditPeer
DBUserDBSpectrumMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBUserDBSpectrumMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMapBuilder
DBUserDBSpectrumMark - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBUserDBSpectrumMark() - Constructor for class org.openscience.nmrshiftdb.om.DBUserDBSpectrumMark
DBUserDBSpectrumMarkMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBUserDBSpectrumMarkMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMarkMapBuilder
DBUserDBSpectrumMarkPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBUserDBSpectrumMarkPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBUserDBSpectrumMarkPeer
DBUserDBSpectrumPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBUserDBSpectrumPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBUserDBSpectrumPeer
DBWishlist - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBWishlist() - Constructor for class org.openscience.nmrshiftdb.om.DBWishlist
DBWishlistMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
DBWishlistMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.DBWishlistMapBuilder
DBWishlistPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
DBWishlistPeer() - Constructor for class org.openscience.nmrshiftdb.om.DBWishlistPeer
DEFAULT_MACHINE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the column name for the DEFAULT_MACHINE field
defaultMachine - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The value for the defaultMachine field
degree - Variable in class org.openscience.nmrshiftdb.om.BaseDBBond: The value for the degree field
DEGREE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: the column name for the DEGREE field
delete(Connection) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Deletes this atom.
delete(Connection) - Method in class org.openscience.nmrshiftdb.om.DBBond: Deletes a bond
delete(int, int) - Static method in class org.openscience.nmrshiftdb.om.DBBookmarkPeer: deletes a certain bookmark
delete(Connection) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Deletes this molecule plus all associated rows (including spectra, independent of review flag).
delete(Connection, boolean) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Deletes this spectrum plus all associated rows.
delete() - Method in class org.openscience.nmrshiftdb.om.DBWishlist: Deletes this item.
DELETE_SEARCH_HISTORY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
DeleteOldMolfiles - Class in org.openscience.nmrshiftdb.daemons: A daemon that deletes all mol files and files needed for export older than 60 minutes
DeleteOldMolfiles() - Constructor for class org.openscience.nmrshiftdb.daemons.DeleteOldMolfiles
DELETION - Static variable in class org.openscience.nmrshiftdb.util.lDistance
delta - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
descending - Variable in class org.openscience.nmrshiftdb.util.ValueTripleComparator
descending - Variable in class org.openscience.nmrshiftdb.util.VfvbComparator
description - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: The value for the description field
DESCRIPTION - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: the column name for the DESCRIPTION field
description - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: The value for the description field
DESCRIPTION - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: the column name for the DESCRIPTION field
description - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: The value for the description field
DESCRIPTION - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: the column name for the DESCRIPTION field
DESCRIPTION_SOUNDEX - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: the column name for the DESCRIPTION_SOUNDEX field
DESCRIPTION_SOUNDEX - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: the column name for the DESCRIPTION_SOUNDEX field
descriptionSoundex - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: The value for the descriptionSoundex field
descriptionSoundex - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: The value for the descriptionSoundex field
DetailPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling the display of details
DetailPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.DetailPortlet
DICT_REF - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: the column name for the DICT_REF field
dictRef - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The value for the dictRef field
dimensionality - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: The value for the dimensionality field
DIMENSIONALITY - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: the column name for the DIMENSIONALITY field
display(IMolecule) - Static method in class org.openscience.nmrshiftdb.util.G98Shifts
displayText - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
doAdminmachines(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
doAssignment(Document) - Method in interface org.openscience.nmrshiftdb.webservices.NMRShiftDB
doAssignment(Document) - Method in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBArticleMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBAtomMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBAuthorMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBBondDBAtomMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBBondMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBBookDBPublisherMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBBookMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBBookmarkMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameTypeMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBChemicalNameMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBConditionMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBConditionTypeMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet2dMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet3dMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSetTypeMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBCouplingMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBGuestbookMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBIdentifierMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBIsotopeMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBJournalMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBJournalVolumeMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBKeywordMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBLabGroupMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBLiteratureMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBMachineMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeDBKeywordMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeHyperlinkMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBPublisherMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBRawFileDBSpectrumMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBRawFileMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBReviewGroupDBUserMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBReviewGroupMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSampleMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSessionsMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBShiftMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSignalDBAtomMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSignalMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBConditionMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBKeywordMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBLiteratureMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumHyperlinkMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumTypeMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumEditMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMarkMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.DBWishlistMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.IsAuthorMapBuilder: The doBuild() method builds the DatabaseMap
doBuild() - Method in class org.openscience.nmrshiftdb.om.map.IsEditorMapBuilder: The doBuild() method builds the DatabaseMap
doChangedates(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
doClear(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
doClear(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
doDelete(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsUpdateAction: Database Delete Action for Security Permissions.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do deletes.
doDelete(DBArticle) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer
doDelete(DBArticle, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do deletes.
doDelete(DBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer
doDelete(DBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do deletes.
doDelete(DBAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer
doDelete(DBAuthor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do deletes.
doDelete(DBBondDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer
doDelete(DBBondDBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do deletes.
doDelete(DBBond) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer
doDelete(DBBond, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do deletes.
doDelete(DBBookDBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer
doDelete(DBBookDBPublisher, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do deletes.
doDelete(DBBookmark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer
doDelete(DBBookmark, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do deletes.
doDelete(DBBook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer
doDelete(DBBook, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do deletes.
doDelete(DBCanonicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer
doDelete(DBCanonicalName, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do deletes.
doDelete(DBCanonicalNameType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer
doDelete(DBCanonicalNameType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do deletes.
doDelete(DBChemicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer
doDelete(DBChemicalName, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do deletes.
doDelete(DBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer
doDelete(DBCondition, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do deletes.
doDelete(DBConditionType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer
doDelete(DBConditionType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do deletes.
doDelete(DBCoordinateSet2d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer
doDelete(DBCoordinateSet2d, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do deletes.
doDelete(DBCoordinateSet3d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer
doDelete(DBCoordinateSet3d, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do deletes.
doDelete(DBCoordinateSetType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer
doDelete(DBCoordinateSetType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do deletes.
doDelete(DBCoupling) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer
doDelete(DBCoupling, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do deletes.
doDelete(DBGuestbook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer
doDelete(DBGuestbook, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do deletes.
doDelete(DBIdentifier) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer
doDelete(DBIdentifier, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do deletes.
doDelete(DBIsotope) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer
doDelete(DBIsotope, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do deletes.
doDelete(DBJournal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer
doDelete(DBJournal, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do deletes.
doDelete(DBJournalVolume) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer
doDelete(DBJournalVolume, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do deletes.
doDelete(DBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer
doDelete(DBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do deletes.
doDelete(DBLabGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer
doDelete(DBLabGroup, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do deletes.
doDelete(DBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
doDelete(DBLiterature, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do deletes.
doDelete(DBMachine) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer
doDelete(DBMachine, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do deletes.
doDelete(DBMoleculeDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer
doDelete(DBMoleculeDBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do deletes.
doDelete(DBMoleculeHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer
doDelete(DBMoleculeHyperlink, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do deletes.
doDelete(DBMolecule) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer
doDelete(DBMolecule, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do deletes.
doDelete(DBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer
doDelete(DBPublisher, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do deletes.
doDelete(DBRawFileDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer
doDelete(DBRawFileDBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do deletes.
doDelete(DBRawFile) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer
doDelete(DBRawFile, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do deletes.
doDelete(DBReviewGroupDBUser) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer
doDelete(DBReviewGroupDBUser, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do deletes.
doDelete(DBReviewGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer
doDelete(DBReviewGroup, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do deletes.
doDelete(DBSample) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
doDelete(DBSample, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do deletes.
doDelete(DBSessions) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer
doDelete(DBSessions, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do deletes.
doDelete(DBShift) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer
doDelete(DBShift, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do deletes.
doDelete(DBSignalDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer
doDelete(DBSignalDBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do deletes.
doDelete(DBSignal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer
doDelete(DBSignal, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do deletes.
doDelete(DBSpectrumDBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer
doDelete(DBSpectrumDBCondition, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do deletes.
doDelete(DBSpectrumDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer
doDelete(DBSpectrumDBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do deletes.
doDelete(DBSpectrumDBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer
doDelete(DBSpectrumDBLiterature, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do deletes.
doDelete(DBSpectrumHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer
doDelete(DBSpectrumHyperlink, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do deletes.
doDelete(DBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer
doDelete(DBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do deletes.
doDelete(DBSpectrumType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer
doDelete(DBSpectrumType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do deletes.
doDelete(DBUserDBSpectrumEdit) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer
doDelete(DBUserDBSpectrumEdit, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do deletes.
doDelete(DBUserDBSpectrumMark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer
doDelete(DBUserDBSpectrumMark, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do deletes.
doDelete(DBUserDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer
doDelete(DBUserDBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do deletes.
doDelete(DBWishlist) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer
doDelete(DBWishlist, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do deletes.
doDelete(IsAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer
doDelete(IsAuthor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to delete.
doDelete(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do deletes.
doDelete(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do deletes.
doDelete(IsEditor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer
doDelete(IsEditor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to delete.
doDelete(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do deletes.
doDelete(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to delete.
doDeleteorder(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
doDeleteorder(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
doEditorder(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
doEditsubmitorder(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
doElucidate(Document) - Method in interface org.openscience.nmrshiftdb.webservices.NMRShiftDB
doElucidate(Document) - Method in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
doEmailForReviewAndSerialize(SubmittingData, RunData, TurbineUser) - Static method in class org.openscience.nmrshiftdb.portlets.SubmitPortlet: Sends an email to the reviewer and serializes the data
doEntry(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.WishlistPortletAction: puts an entry into wishlist.
doEntryguestbooknew(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.GuestbookPortletAction: gets the parameters for a new auction and saves it (TO DO: Validation)
doFullfill(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
doFullfill(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction: gets the parameters for a new auction and saves it (TO DO: Validation)
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.openscience.nmrshiftdb.CaptchaServlet
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.openscience.nmrshiftdb.InitServlet
doGet(HttpServletRequest, HttpServletResponse) - Method in class org.openscience.nmrshiftdb.NmrshiftdbServlet: The get method delegates to doPost.
doi - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The value for the doi field
DOI - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: the column name for the DOI field
doInsert(AbInitioDataset, String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Insert a AbInitioDataset into the database.
doInsert(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsUpdateAction: Database Insert Action for Security Permissions.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do inserts.
doInsert(DBArticle) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do inserts
doInsert(DBArticle, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do inserts.
doInsert(DBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do inserts
doInsert(DBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do inserts.
doInsert(DBAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do inserts
doInsert(DBAuthor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do inserts.
doInsert(DBBondDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do inserts
doInsert(DBBondDBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do inserts.
doInsert(DBBond) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do inserts
doInsert(DBBond, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do inserts.
doInsert(DBBookDBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do inserts
doInsert(DBBookDBPublisher, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do inserts.
doInsert(DBBookmark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do inserts
doInsert(DBBookmark, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do inserts.
doInsert(DBBook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do inserts
doInsert(DBBook, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do inserts.
doInsert(DBCanonicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do inserts
doInsert(DBCanonicalName, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do inserts.
doInsert(DBCanonicalNameType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do inserts
doInsert(DBCanonicalNameType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do inserts.
doInsert(DBChemicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do inserts
doInsert(DBChemicalName, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do inserts.
doInsert(DBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do inserts
doInsert(DBCondition, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do inserts.
doInsert(DBConditionType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do inserts
doInsert(DBConditionType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do inserts.
doInsert(DBCoordinateSet2d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do inserts
doInsert(DBCoordinateSet2d, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do inserts.
doInsert(DBCoordinateSet3d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do inserts
doInsert(DBCoordinateSet3d, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do inserts.
doInsert(DBCoordinateSetType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do inserts
doInsert(DBCoordinateSetType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do inserts.
doInsert(DBCoupling) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do inserts
doInsert(DBCoupling, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do inserts.
doInsert(DBGuestbook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do inserts
doInsert(DBGuestbook, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do inserts.
doInsert(DBIdentifier) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do inserts
doInsert(DBIdentifier, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do inserts.
doInsert(DBIsotope) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do inserts
doInsert(DBIsotope, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do inserts.
doInsert(DBJournal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do inserts
doInsert(DBJournal, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do inserts.
doInsert(DBJournalVolume) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do inserts
doInsert(DBJournalVolume, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do inserts.
doInsert(DBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do inserts
doInsert(DBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do inserts.
doInsert(DBLabGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do inserts
doInsert(DBLabGroup, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do inserts.
doInsert(DBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do inserts
doInsert(DBLiterature, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do inserts.
doInsert(DBMachine) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do inserts
doInsert(DBMachine, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do inserts.
doInsert(DBMoleculeDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do inserts
doInsert(DBMoleculeDBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do inserts.
doInsert(DBMoleculeHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do inserts
doInsert(DBMoleculeHyperlink, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do inserts.
doInsert(DBMolecule) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do inserts
doInsert(DBMolecule, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do inserts.
doInsert(DBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do inserts
doInsert(DBPublisher, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do inserts.
doInsert(DBRawFileDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do inserts
doInsert(DBRawFileDBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do inserts.
doInsert(DBRawFile) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do inserts
doInsert(DBRawFile, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do inserts.
doInsert(DBReviewGroupDBUser) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do inserts
doInsert(DBReviewGroupDBUser, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do inserts.
doInsert(DBReviewGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do inserts
doInsert(DBReviewGroup, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do inserts.
doInsert(DBSample) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do inserts
doInsert(DBSample, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do inserts.
doInsert(DBSessions) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do inserts
doInsert(DBSessions, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do inserts.
doInsert(DBShift) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do inserts
doInsert(DBShift, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do inserts.
doInsert(DBSignalDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do inserts
doInsert(DBSignalDBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do inserts.
doInsert(DBSignal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do inserts
doInsert(DBSignal, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do inserts.
doInsert(DBSpectrumDBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do inserts
doInsert(DBSpectrumDBCondition, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do inserts.
doInsert(DBSpectrumDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do inserts
doInsert(DBSpectrumDBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do inserts.
doInsert(DBSpectrumDBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do inserts
doInsert(DBSpectrumDBLiterature, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do inserts.
doInsert(DBSpectrumHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do inserts
doInsert(DBSpectrumHyperlink, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do inserts.
doInsert(DBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do inserts
doInsert(DBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do inserts.
doInsert(DBSpectrumType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do inserts
doInsert(DBSpectrumType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do inserts.
doInsert(DBUserDBSpectrumEdit) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do inserts
doInsert(DBUserDBSpectrumEdit, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do inserts.
doInsert(DBUserDBSpectrumMark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do inserts
doInsert(DBUserDBSpectrumMark, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do inserts.
doInsert(DBUserDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do inserts
doInsert(DBUserDBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do inserts.
doInsert(DBWishlist) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do inserts
doInsert(DBWishlist, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do inserts.
doInsert(IsAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do inserts
doInsert(IsAuthor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do inserts.
doInsert(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do inserts.
doInsert(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do inserts.
doInsert(IsEditor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do inserts
doInsert(IsEditor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do inserts.
doMain(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.GuestbookPortletAction: sets main page
doMain(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.SearchConditionAction: sets main page
doMain(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.WishlistPortletAction: sets main page
doMakemember(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
doNoassignment(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
doPerform(RunData) - Method in class org.openscience.nmrshiftdb.modules.actions.RememberPassword: Performs the action.
doPidescriptors(IAtomContainer, IAtom, float[], int) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils
doPost(HttpServletRequest, HttpServletResponse) - Method in class org.openscience.nmrshiftdb.NmrshiftdbServlet: The doPost Method.
doPrediction(Document) - Method in interface org.openscience.nmrshiftdb.webservices.NMRShiftDB
doPrediction(Document) - Method in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
doRemeasurement(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
doReview(SubmittingData, Date, TurbineUser, RunData) - Static method in class org.openscience.nmrshiftdb.portlets.SubmitPortlet: Does everything connected with the review process.
doSearch(Document) - Method in interface org.openscience.nmrshiftdb.webservices.NMRShiftDB
doSearch(Document) - Method in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do selects within a transaction.
doSelect(DBArticle) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do selects within a transaction.
doSelect(DBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do selects within a transaction.
doSelect(DBAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do selects within a transaction.
doSelect(DBBondDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do selects within a transaction.
doSelect(DBBond) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do selects within a transaction.
doSelect(DBBookDBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do selects within a transaction.
doSelect(DBBookmark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do selects within a transaction.
doSelect(DBBook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do selects within a transaction.
doSelect(DBCanonicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do selects within a transaction.
doSelect(DBCanonicalNameType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do selects within a transaction.
doSelect(DBChemicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do selects within a transaction.
doSelect(DBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do selects within a transaction.
doSelect(DBConditionType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do selects within a transaction.
doSelect(DBCoordinateSet2d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do selects within a transaction.
doSelect(DBCoordinateSet3d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do selects within a transaction.
doSelect(DBCoordinateSetType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do selects within a transaction.
doSelect(DBCoupling) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do selects within a transaction.
doSelect(DBGuestbook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do selects within a transaction.
doSelect(DBIdentifier) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do selects within a transaction.
doSelect(DBIsotope) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do selects within a transaction.
doSelect(DBJournal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do selects within a transaction.
doSelect(DBJournalVolume) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do selects within a transaction.
doSelect(DBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do selects within a transaction.
doSelect(DBLabGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do selects within a transaction.
doSelect(DBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do selects within a transaction.
doSelect(DBMachine) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do selects within a transaction.
doSelect(DBMoleculeDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do selects within a transaction.
doSelect(DBMoleculeHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do selects within a transaction.
doSelect(DBMolecule) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do selects within a transaction.
doSelect(DBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do selects within a transaction.
doSelect(DBRawFileDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do selects within a transaction.
doSelect(DBRawFile) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do selects within a transaction.
doSelect(DBReviewGroupDBUser) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do selects within a transaction.
doSelect(DBReviewGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do selects within a transaction.
doSelect(DBSample) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do selects within a transaction.
doSelect(DBSessions) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do selects within a transaction.
doSelect(DBShift) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do selects within a transaction.
doSelect(DBSignalDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do selects within a transaction.
doSelect(DBSignal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do selects within a transaction.
doSelect(DBSpectrumDBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do selects within a transaction.
doSelect(DBSpectrumDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do selects within a transaction.
doSelect(DBSpectrumDBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do selects within a transaction.
doSelect(DBSpectrumHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do selects within a transaction.
doSelect(DBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do selects within a transaction.
doSelect(DBSpectrumType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do selects within a transaction.
doSelect(DBUserDBSpectrumEdit) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do selects within a transaction.
doSelect(DBUserDBSpectrumMark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do selects within a transaction.
doSelect(DBUserDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do selects within a transaction.
doSelect(DBWishlist) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do selects within a transaction.
doSelect(IsAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do selects
doSelect(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do selects.
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do selects within a transaction.
doSelect(IsEditor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do selects
doSelect(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer
doSelect(Criteria, ServletConfig, HttpServletRequest) - Static method in class org.openscience.nmrshiftdb.om.DBSessionsPeer: This is a method only used in index.jsp.
doSelectByChemicalName(String) - Static method in class org.openscience.nmrshiftdb.om.DBMoleculePeer: Method returns molecules with a certain chemical name and at least one spectrum reviewed as true.
doSelectByInchi(String) - Static method in class org.openscience.nmrshiftdb.om.DBMoleculePeer: Method returns molecules with a certain smiles and at least one spectrum reviewed as true.
doSelectByKeyword(String) - Static method in class org.openscience.nmrshiftdb.om.DBKeywordPeer: Gets a DBKeyword by a keyword given as a string
doSelectBySmiles(String, String, boolean) - Static method in class org.openscience.nmrshiftdb.om.DBMoleculePeer: Method returns molecules with a certain smiles and at least one spectrum reviewed as true.
doSelectJoinAllExceptDBAtomRelatedByAtomId1(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: selects a collection of DBCoupling objects pre-filled with all related objects.
doSelectJoinAllExceptDBAtomRelatedByAtomId2(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: selects a collection of DBCoupling objects pre-filled with all related objects.
doSelectJoinAllExceptDBCondition(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: selects a collection of DBSample objects pre-filled with all related objects.
doSelectJoinAllExceptDBJournalVolume(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: selects a collection of DBArticle objects pre-filled with all related objects.
doSelectJoinAllExceptDBLiteratureRelatedByLiteratureId(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: selects a collection of DBArticle objects pre-filled with all related objects.
doSelectJoinAllExceptDBLiteratureRelatedByPublishedInBook(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: selects a collection of DBArticle objects pre-filled with all related objects.
doSelectJoinAllExceptDBMachine(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: selects a collection of DBSample objects pre-filled with all related objects.
doSelectJoinAllExceptDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: selects a collection of DBSample objects pre-filled with all related objects.
doSelectJoinAllExceptDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: selects a collection of DBSpectrum objects pre-filled with all related objects.
doSelectJoinAllExceptDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: selects a collection of DBWishlist objects pre-filled with all related objects.
doSelectJoinAllExceptDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: selects a collection of DBCoupling objects pre-filled with all related objects.
doSelectJoinAllExceptDBSpectrumType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: selects a collection of DBSpectrum objects pre-filled with all related objects.
doSelectJoinAllExceptDBSpectrumType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: selects a collection of DBWishlist objects pre-filled with all related objects.
doSelectJoinAllExceptNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: selects a collection of DBSample objects pre-filled with all related objects.
doSelectJoinAllExceptNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: selects a collection of DBSpectrum objects pre-filled with all related objects.
doSelectJoinAllExceptNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: selects a collection of DBWishlist objects pre-filled with all related objects.
doSelectJoinDBAtom(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: selects a collection of DBBondDBAtom objects pre-filled with their DBAtom objects.
doSelectJoinDBAtom(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: selects a collection of DBCoordinateSet2d objects pre-filled with their DBAtom objects.
doSelectJoinDBAtom(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: selects a collection of DBCoordinateSet3d objects pre-filled with their DBAtom objects.
doSelectJoinDBAtom(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: selects a collection of DBIdentifier objects pre-filled with their DBAtom objects.
doSelectJoinDBAtom(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: selects a collection of DBSignalDBAtom objects pre-filled with their DBAtom objects.
doSelectJoinDBAtomRelatedByAtomId1(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: selects a collection of DBCoupling objects pre-filled with their DBAtom objects.
doSelectJoinDBAtomRelatedByAtomId2(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: selects a collection of DBCoupling objects pre-filled with their DBAtom objects.
doSelectJoinDBAuthor(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: selects a collection of IsAuthor objects pre-filled with their DBAuthor objects.
doSelectJoinDBAuthor(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: selects a collection of IsEditor objects pre-filled with their DBAuthor objects.
doSelectJoinDBBond(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: selects a collection of DBBondDBAtom objects pre-filled with their DBBond objects.
doSelectJoinDBCanonicalNameType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: selects a collection of DBCanonicalName objects pre-filled with their DBCanonicalNameType objects.
doSelectJoinDBCondition(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: selects a collection of DBMachine objects pre-filled with their DBCondition objects.
doSelectJoinDBCondition(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: selects a collection of DBSample objects pre-filled with their DBCondition objects.
doSelectJoinDBCondition(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: selects a collection of DBSpectrumDBCondition objects pre-filled with their DBCondition objects.
doSelectJoinDBConditionType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: selects a collection of DBCondition objects pre-filled with their DBConditionType objects.
doSelectJoinDBCoordinateSetType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: selects a collection of DBCoordinateSet2d objects pre-filled with their DBCoordinateSetType objects.
doSelectJoinDBCoordinateSetType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: selects a collection of DBCoordinateSet3d objects pre-filled with their DBCoordinateSetType objects.
doSelectJoinDBJournal(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: selects a collection of DBJournalVolume objects pre-filled with their DBJournal objects.
doSelectJoinDBJournalVolume(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: selects a collection of DBArticle objects pre-filled with their DBJournalVolume objects.
doSelectJoinDBKeyword(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: selects a collection of DBMoleculeDBKeyword objects pre-filled with their DBKeyword objects.
doSelectJoinDBKeyword(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: selects a collection of DBSpectrumDBKeyword objects pre-filled with their DBKeyword objects.
doSelectJoinDBLabGroup(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: selects a collection of DBMachine objects pre-filled with their DBLabGroup objects.
doSelectJoinDBLiterature(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: selects a collection of DBBookDBPublisher objects pre-filled with their DBLiterature objects.
doSelectJoinDBLiterature(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: selects a collection of DBBook objects pre-filled with their DBLiterature objects.
doSelectJoinDBLiterature(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: selects a collection of DBIdentifier objects pre-filled with their DBLiterature objects.
doSelectJoinDBLiterature(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: selects a collection of DBSpectrumDBLiterature objects pre-filled with their DBLiterature objects.
doSelectJoinDBLiterature(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: selects a collection of IsAuthor objects pre-filled with their DBLiterature objects.
doSelectJoinDBLiterature(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: selects a collection of IsEditor objects pre-filled with their DBLiterature objects.
doSelectJoinDBLiteratureRelatedByLiteratureId(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: selects a collection of DBArticle objects pre-filled with their DBLiterature objects.
doSelectJoinDBLiteratureRelatedByPublishedInBook(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: selects a collection of DBArticle objects pre-filled with their DBLiterature objects.
doSelectJoinDBMachine(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: selects a collection of DBSample objects pre-filled with their DBMachine objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: selects a collection of DBAtom objects pre-filled with their DBMolecule objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: selects a collection of DBBookmark objects pre-filled with their DBMolecule objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: selects a collection of DBCanonicalName objects pre-filled with their DBMolecule objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: selects a collection of DBChemicalName objects pre-filled with their DBMolecule objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: selects a collection of DBMoleculeDBKeyword objects pre-filled with their DBMolecule objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: selects a collection of DBMoleculeHyperlink objects pre-filled with their DBMolecule objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: selects a collection of DBSample objects pre-filled with their DBMolecule objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: selects a collection of DBSpectrum objects pre-filled with their DBMolecule objects.
doSelectJoinDBMolecule(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: selects a collection of DBWishlist objects pre-filled with their DBMolecule objects.
doSelectJoinDBPublisher(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: selects a collection of DBBookDBPublisher objects pre-filled with their DBPublisher objects.
doSelectJoinDBRawFile(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: selects a collection of DBRawFileDBSpectrum objects pre-filled with their DBRawFile objects.
doSelectJoinDBReviewGroup(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: selects a collection of DBReviewGroupDBUser objects pre-filled with their DBReviewGroup objects.
doSelectJoinDBSample(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: selects a collection of DBRawFile objects pre-filled with their DBSample objects.
doSelectJoinDBSignal(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: selects a collection of DBShift objects pre-filled with their DBSignal objects.
doSelectJoinDBSignal(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: selects a collection of DBSignalDBAtom objects pre-filled with their DBSignal objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: selects a collection of DBCoupling objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: selects a collection of DBRawFileDBSpectrum objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: selects a collection of DBSignal objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: selects a collection of DBSpectrumDBCondition objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: selects a collection of DBSpectrumDBKeyword objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: selects a collection of DBSpectrumDBLiterature objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: selects a collection of DBSpectrumHyperlink objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: selects a collection of DBUserDBSpectrumEdit objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: selects a collection of DBUserDBSpectrumMark objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrum(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: selects a collection of DBUserDBSpectrum objects pre-filled with their DBSpectrum objects.
doSelectJoinDBSpectrumType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: selects a collection of DBIsotope objects pre-filled with their DBSpectrumType objects.
doSelectJoinDBSpectrumType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: selects a collection of DBSpectrum objects pre-filled with their DBSpectrumType objects.
doSelectJoinDBSpectrumType(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: selects a collection of DBWishlist objects pre-filled with their DBSpectrumType objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: selects a collection of DBBookmark objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: selects a collection of DBCondition objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: selects a collection of DBGuestbook objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: selects a collection of DBLabGroup objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: selects a collection of DBMolecule objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: selects a collection of DBReviewGroupDBUser objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: selects a collection of DBSample objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: selects a collection of DBSpectrum objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: selects a collection of DBSpectrumType objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: selects a collection of DBUserDBSpectrumEdit objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: selects a collection of DBUserDBSpectrumMark objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: selects a collection of DBUserDBSpectrum objects pre-filled with their NmrshiftdbUser objects.
doSelectJoinNmrshiftdbUser(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: selects a collection of DBWishlist objects pre-filled with their NmrshiftdbUser objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Grabs the raw Village records to be formed into objects.
doSelectVillageRecords(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Grabs the raw Village records to be formed into objects.
doShowoverview(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
doSubmit(Document) - Method in interface org.openscience.nmrshiftdb.webservices.NMRShiftDB
doSubmit(Document) - Method in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
doSubmitaddmachine(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
doSubmitdelete(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
doSubmitorder(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction: gets the parameters for a new auction and saves it (TO DO: Validation)
doSubmittypes(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.ChooseSpectrumTypeAction: gets the parameters for a new auction and saves it (TO DO: Validation)
doTest(String, String) - Method in class org.openscience.nmrshiftdb.tests.ServletTests
doubleBondConfiguration - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
doUpdate(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsUpdateAction: Database Update Action for Security Permissions.
doUpdate(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.security.UserReviewgroupUpdateAction: Database Update Action for Security Roles.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do updates.
doUpdate(DBArticle) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer
doUpdate(DBArticle, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do updates.
doUpdate(DBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer
doUpdate(DBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do updates.
doUpdate(DBAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer
doUpdate(DBAuthor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do updates.
doUpdate(DBBondDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer
doUpdate(DBBondDBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do updates.
doUpdate(DBBond) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer
doUpdate(DBBond, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do updates.
doUpdate(DBBookDBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer
doUpdate(DBBookDBPublisher, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do updates.
doUpdate(DBBookmark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer
doUpdate(DBBookmark, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do updates.
doUpdate(DBBook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer
doUpdate(DBBook, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do updates.
doUpdate(DBCanonicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer
doUpdate(DBCanonicalName, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do updates.
doUpdate(DBCanonicalNameType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer
doUpdate(DBCanonicalNameType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do updates.
doUpdate(DBChemicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer
doUpdate(DBChemicalName, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do updates.
doUpdate(DBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer
doUpdate(DBCondition, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do updates.
doUpdate(DBConditionType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer
doUpdate(DBConditionType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do updates.
doUpdate(DBCoordinateSet2d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer
doUpdate(DBCoordinateSet2d, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do updates.
doUpdate(DBCoordinateSet3d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer
doUpdate(DBCoordinateSet3d, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do updates.
doUpdate(DBCoordinateSetType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer
doUpdate(DBCoordinateSetType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do updates.
doUpdate(DBCoupling) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer
doUpdate(DBCoupling, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do updates.
doUpdate(DBGuestbook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer
doUpdate(DBGuestbook, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do updates.
doUpdate(DBIdentifier) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer
doUpdate(DBIdentifier, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do updates.
doUpdate(DBIsotope) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer
doUpdate(DBIsotope, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do updates.
doUpdate(DBJournal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer
doUpdate(DBJournal, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do updates.
doUpdate(DBJournalVolume) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer
doUpdate(DBJournalVolume, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do updates.
doUpdate(DBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer
doUpdate(DBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do updates.
doUpdate(DBLabGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer
doUpdate(DBLabGroup, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do updates.
doUpdate(DBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
doUpdate(DBLiterature, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do updates.
doUpdate(DBMachine) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer
doUpdate(DBMachine, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do updates.
doUpdate(DBMoleculeDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer
doUpdate(DBMoleculeDBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do updates.
doUpdate(DBMoleculeHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer
doUpdate(DBMoleculeHyperlink, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do updates.
doUpdate(DBMolecule) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer
doUpdate(DBMolecule, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do updates.
doUpdate(DBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer
doUpdate(DBPublisher, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do updates.
doUpdate(DBRawFileDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer
doUpdate(DBRawFileDBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do updates.
doUpdate(DBRawFile) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer
doUpdate(DBRawFile, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do updates.
doUpdate(DBReviewGroupDBUser) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer
doUpdate(DBReviewGroupDBUser, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do updates.
doUpdate(DBReviewGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer
doUpdate(DBReviewGroup, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do updates.
doUpdate(DBSample) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
doUpdate(DBSample, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do updates.
doUpdate(DBSessions) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer
doUpdate(DBSessions, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do updates.
doUpdate(DBShift) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer
doUpdate(DBShift, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do updates.
doUpdate(DBSignalDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer
doUpdate(DBSignalDBAtom, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do updates.
doUpdate(DBSignal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer
doUpdate(DBSignal, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do updates.
doUpdate(DBSpectrumDBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer
doUpdate(DBSpectrumDBCondition, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do updates.
doUpdate(DBSpectrumDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer
doUpdate(DBSpectrumDBKeyword, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do updates.
doUpdate(DBSpectrumDBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer
doUpdate(DBSpectrumDBLiterature, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do updates.
doUpdate(DBSpectrumHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer
doUpdate(DBSpectrumHyperlink, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do updates.
doUpdate(DBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer
doUpdate(DBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do updates.
doUpdate(DBSpectrumType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer
doUpdate(DBSpectrumType, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do updates.
doUpdate(DBUserDBSpectrumEdit) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer
doUpdate(DBUserDBSpectrumEdit, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do updates.
doUpdate(DBUserDBSpectrumMark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer
doUpdate(DBUserDBSpectrumMark, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do updates.
doUpdate(DBUserDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer
doUpdate(DBUserDBSpectrum, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do updates.
doUpdate(DBWishlist) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer
doUpdate(DBWishlist, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do updates.
doUpdate(IsAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer
doUpdate(IsAuthor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Method to do update.
doUpdate(Criteria) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do updates.
doUpdate(Criteria, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do updates.
doUpdate(IsEditor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer
doUpdate(IsEditor, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Method to do update.
doUpload(RunData, Context) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.WishlistPortletAction: Handles an mdl upload action.
doWithh(IMolecule, RunData) - Static method in class org.openscience.nmrshiftdb.portlets.PredictPortlet: Sets molh as an attribute into the session, key mol, and saturates, normalizes, adds hs, places these.

E

edit - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: The value for the edit field
EDIT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: the column name for the EDIT field
EDITED - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
EDITOR_ORDER - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: the column name for the EDITOR_ORDER field
editorOrder - Variable in class org.openscience.nmrshiftdb.om.BaseIsEditor: The value for the editorOrder field
editSpectrum - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
ELEMENT_SYMBOL - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: the column name for the ELEMENT_SYMBOL field
elementSymbol - Variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope: The value for the elementSymbol field
emailSignature - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
enterconstants - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
ENTRIES_KEY - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.GuestbookPortletAction
entry - Variable in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
epdes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
equals(DBMoleculeHyperlink) - Method in class org.openscience.nmrshiftdb.om.DBMoleculeHyperlink: The equals method comparing by the Hyperlink fiels
equals(DBSpectrumHyperlink) - Method in class org.openscience.nmrshiftdb.om.DBSpectrumHyperlink: The equals method comparing by the Hyperlink fiels
escape(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Prepares a string for sql quersis by escaping " and ' and \
escapeForHtml(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Description of the Method
ET_AL - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: the column name for the ET_AL field
etAl - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The value for the etAl field
etalbook - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's an article in a book more authors than stated
etalprov - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: More authors than stated
EXACT - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
executeAnalyzeSql(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Analyzes the current sql logfile
executeBuildHose(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes building of HOSECodes
executeCheckAssignments(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Checks if shifts are assigned to other atom the spectrum type suggests
executeCheckDoubleMolecules(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes checking of double molecules
executeCheckNCI(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes ckecking vi NCI database
executeCheckShifts(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes ckecking of shifts
executeCompareShifts(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes comparing of shifts to cdk.
executeCreateInchis(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Creates missing INChIs
executeCrosscheckHose(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes an svm crossvalidation
executeCrossvalidate(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes an svm crossvalidation
executeCrossvalidateWeka(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel
executeDeletePubchem(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel
executeLastSearch(HttpSession, StringAndInt, RunData) - Method in class org.openscience.nmrshiftdb.portlets.ResultPortlet: Executes the last search
executeMakeAromaticity(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes making of aromaticities
executeMakeDescriptorsAll(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Creates the proton descriptors
executeMakeDescriptorsNew(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Creates the proton descriptors
executeMakePubchem(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Creates a file for pubchem submit
executeMakeSmilesChiral(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes making of chiral smiles
executeNCI(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Inserts nci mapping from mapping files
executeReadACD(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes reading of acd names file
executeReadAlk(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Reads corina 3d coordinates
executeReadCorina(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Reads corina 3d coordinates
executeReadDkfz(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes reading dkfz files
executeReadGaussian(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes reading Gaussain log files
executeReadMainz(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Reads file from uni mainz.
executeReadMainzC(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Reads file from uni mainz.(carbon)
executeReadWageningen(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Reads file from uni mainz.
executeRebuildFingerprints(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Several methods, use comments to activate
executeSearch(HttpSession, int[], StringAndInt, RunData) - Method in class org.openscience.nmrshiftdb.portlets.ResultPortlet: Executes searches from the searchHistory.
executeSearch(HttpSession, int[], StringAndInt, RunData, boolean, boolean) - Method in class org.openscience.nmrshiftdb.portlets.ResultPortlet: Executes searches from the searchHistory.
executeSearch(ArrayList, int[], StringAndInt, ArrayList<Double>, boolean, boolean, RunData, String, boolean, boolean, boolean, List, boolean) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Executes searches from the searchHistory.
executeSynchronize(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Executes synchronization
executeWriteCorina(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Makes a file needed for corina coordinate generation
existingMoleculeId - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
existingMoleculeKeywords - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
existingSpectrumKeywords - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
Export - Class in org.openscience.nmrshiftdb.util: This class converts spectra/molecules to various other formats
Export(DBSpectrum) - Constructor for class org.openscience.nmrshiftdb.util.Export: Constructor for the Export object
Export(DBMolecule) - Constructor for class org.openscience.nmrshiftdb.util.Export: Constructor for the Export object
Export(DBMolecule, DBSpectrum) - Constructor for class org.openscience.nmrshiftdb.util.Export: Constructor for the Export object
extractChemName(BufferedReader, AbInitioDataset) - Method in class org.openscience.nmrshiftdb.util.G98Shifts
extractReferences(String[]) - Static method in class org.openscience.nmrshiftdb.util.G98Shifts

F

FALSE - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
FALSE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
FIELD_STRENGTH - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the column name for the FIELD_STRENGTH field
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticle
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtom
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBond
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBook
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCondition
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournal
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachine
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisher
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSample
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessions
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBShift
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignal
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor
fieldNames - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditor
fieldStrength - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The value for the fieldStrength field
filename - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
fingerprint - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the fingerprint field
FINGERPRINT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the FINGERPRINT field
finished - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the finished field
FINISHED - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the FINISHED field
force3d - Variable in class org.openscience.nmrshiftdb.om.DBAtom
FORMAL_CHARGE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the FORMAL_CHARGE field
formalCharge - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the formalCharge field
format - Static variable in class org.openscience.nmrshiftdb.om.DBSignal
format - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
FORMULA - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
FORMULA_WITH_OTHER - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
fp0 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp0 field
FP0 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP0 field
fp1 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp1 field
FP1 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP1 field
fp10 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp10 field
FP10 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP10 field
fp11 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp11 field
FP11 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP11 field
fp12 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp12 field
FP12 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP12 field
fp13 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp13 field
FP13 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP13 field
fp14 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp14 field
FP14 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP14 field
fp15 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp15 field
FP15 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP15 field
fp2 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp2 field
FP2 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP2 field
fp3 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp3 field
FP3 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP3 field
fp4 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp4 field
FP4 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP4 field
fp5 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp5 field
FP5 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP5 field
fp6 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp6 field
FP6 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP6 field
fp7 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp7 field
FP7 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP7 field
fp8 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp8 field
FP8 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP8 field
fp9 - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the fp9 field
FP9 - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the FP9 field
fppro - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
FRAGMENT - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
frequency - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
FREQUENCY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
from - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's an article the page it starts at
fullfillsOrder - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
FUZZY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants

G

G98Shifts - Class in org.openscience.nmrshiftdb.util: A class to extract a chemical structure and an carbon nmr spectrum from a multi-part Gaussian 98 output file
G98Shifts() - Constructor for class org.openscience.nmrshiftdb.util.G98Shifts
GAUSSIAN - Static variable in class org.openscience.nmrshiftdb.util.PeakPicker
GAUSSIAN_FIRST_DERIVATIVE - Static variable in class org.openscience.nmrshiftdb.util.PeakPicker
GAUSSIAN_SECOND_DERIVATIVE - Static variable in class org.openscience.nmrshiftdb.util.PeakPicker
generalPredict(IAtomContainer, IAtom, boolean, boolean, int, int, StringBuffer, boolean, boolean, RunData, Map, int, boolean, StringBuffer, int, boolean, boolean) - Static method in class org.openscience.nmrshiftdb.PredictionTool: This method does a prediction, either from the database or from the mapsmap initialized in the constructor.
GeneralUtils - Class in org.openscience.nmrshiftdb.util: Contains some utils not fitting in somewhere else
GeneralUtils() - Constructor for class org.openscience.nmrshiftdb.util.GeneralUtils: Constructor for the GeneralUtils object (private since only static methods)
GenerateId - Class in org.openscience.nmrshiftdb.util: Class for generating unique Identifiers
GenerateId() - Constructor for class org.openscience.nmrshiftdb.util.GenerateId
GenerateId() - Static method in class org.openscience.nmrshiftdb.util.GenerateId: Generates a unique identifier by generating a random number and getting its digest
generateInchi(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Generates in inchi for a mol file via cambridge web service.
generateInchiKey(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Generates in inchi key for a mol file via chemspider web service.
get(S) - Method in class org.openscience.nmrshiftdb.util.OneToManyTable
getAdminEmail(RunData) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets the adminEmail from TurbineRessources.properties
getAdminEmail(ServletConfig) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets the adminEmail from TurbineRessources.properties
getAff1() - Method in class org.openscience.nmrshiftdb.util.UrlTool
getAff2() - Method in class org.openscience.nmrshiftdb.util.UrlTool
getAllRings() - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Gets the allRings attribute, set with last run of getProtonClass.
getAnySignal(int) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the DBSignal associated with this atom in a certain spectrum.
getAppropriateURL() - Method in class org.openscience.nmrshiftdb.util.UrlTool: Gets the logon wiht(out) link.
getArticle() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Returns this literature item as an article, in case it is one.
getAsCdkAtom() - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the asCdkAtom attribute of the DBAtom object
getAsCdkAtom(SubmittingData) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the cdk atom corresponding with this atom int molWithH of a submittingData.
getAsCDKMolecule(int, int) - Static method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets a molecule with a certain ID a CDK Molecule object, with all Hs.
getAsCDKMolecule(int) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as a CDK Molecule object, with all Hs.
getAsCDKMoleculeAsEntered(int, boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as a cdk molecule with explicit hs as painted by user.
getAsCDKMoleculeFromId(int) - Static method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets a molecule as a cdk molecule with the user input coordinates, with all Hs.
getAsCDKMoleculeWithAny3d() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as a CDK Molecule object, with 3d coordinates, if any, or null.
getAsCDKMoleculeWithoutH() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as a CDK Molecule object without the Hs
getAsCDKMoleculeWithoutHAndCount() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as a CDK Molecule object without the Hs and h counts.
getAssigned() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Get the Assigned
getAssignmentDate() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Get the AssignmentDate
getAsssignedDate() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the Date the last assignment of the DBSpectrum object took place
getAsXMLString(Object) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets an object as an JSX XML String.
getAtom() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the atom attribute of the ValuesForVelocityBean object
getAtomAt(int) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the atom with mdl number i.
getAtomByHoseCode(String) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets an atom of this molecule with a HOSE code starting with hc.
getAtomicMass() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the AtomicMass
getAtomicMass() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Get the AtomicMass
getAtomId() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the AtomId
getAtomId() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Get the AtomId
getAtomId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Get the AtomId
getAtomId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Get the AtomId
getAtomId() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Get the AtomId
getAtomId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Get the AtomId
getAtomId1() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Get the AtomId1
getAtomId2() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Get the AtomId2
getAtomNumber(IAtom, IAtomContainer) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the atom Number of an atom in a molecule by comparing the coordinates.
getAtoms(int) - Static method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the atoms of a certain molecules.
getAtoms() - Method in class org.openscience.nmrshiftdb.om.DBBond: Gets the atoms of the DBBond object
getAtoms() - Method in class org.openscience.nmrshiftdb.om.DBSignal: Gets the atoms of the DBSignal object
getAtoms(Connection) - Method in class org.openscience.nmrshiftdb.om.DBSignal: Gets the atoms of the DBSignal object
getAtomsAsArrayInMdlOrder(int, HashMap) - Static method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the atoms of a molecule as Array In Order of mdl numbers.
getAtomsAsArrayInMdlOrder() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the atoms of this molecule as Array In Order of mdl numbers.
getAtomsAsArrayInMdlOrderWithoutHs(int, HashMap) - Static method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the atoms of a molecule as Array In Order of mdl numbers without the Hs.
getAtomsAsArrayInMdlOrderWithoutHs() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the atoms of this molecule as Array In Order of mdl numbers without Hs.
getAtomsWithHoseCode() - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets a ArrayList containing all element symbols from isotope table except H.
getAtomsWithoutHs(int) - Static method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the atoms of a certain molecules withouth the Hs.
getAttachment() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the Attachment
getAttachmentIsSet() - Method in class org.openscience.nmrshiftdb.om.DBSample
getAttachmentName() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the AttachmentName
getAttachmentStr() - Method in class org.openscience.nmrshiftdb.om.DBSample
getAuthor() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the author attribute of the DBLiterature object
getAuthorbook() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the authorbook attribute of the DBLiterature object
getAuthorId() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Get the AuthorId
getAuthorId() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Get the AuthorId
getAuthorId() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Get the AuthorId
getAuthorOrder() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Get the AuthorOrder
getAuthorsAndEditors() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the authors and editors of thise DBLiterature object.
getAuthorsFromDB() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets all authors of the DBLiterature object.
getAutonomeName() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the autonomeName attribute of the DBMolecule object
getAutonomeName() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the autonomeName attribute of the SubmittingData object
getAxis() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Get the Axis
getAxis() - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Get the Axis
getBaseUrl() - Method in class org.openscience.nmrshiftdb.util.UrlTool: Gets the baseUrl attribute of the UrlTool object
getBaseUrl(HttpServletRequest) - Method in class org.openscience.nmrshiftdb.util.UrlTool: Gets the baseUrl attribute of the UrlTool object
getBigIntegerValue(BitSet, int) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Gets a BigIntger value representation of the Fingerprint bitset
getBondId() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Get the BondId
getBondId() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Get the BondId
getBonds() - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the bonds of the DBAtom object
getBonds(int) - Static method in class org.openscience.nmrshiftdb.om.DBBondPeer: Gets the bonds of a certain molecule orderd by bondid.
getBonds() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets all DBBond objects connected with this DBMolecule
getBoolean() - Method in class org.openscience.nmrshiftdb.util.StringAndIntAndBoolean
getBROWSE() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getByAtomId(int) - Static method in class org.openscience.nmrshiftdb.om.DBCoordinateSet2dPeer: Gets a coordinate set by atom id.
getByAtomId(int) - Static method in class org.openscience.nmrshiftdb.om.DBCoordinateSet3dPeer: Gets a coordinate set by atom id.
getByMoleculeIdAndMdlNumber(int, int) - Static method in class org.openscience.nmrshiftdb.om.DBAtomPeer: Gets an atom by MoleculeId And MdlNumber
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Retrieves a field from the object by name passed in as a String.
getByName(String) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Retrieves a field from the object by name passed in as a String.
getByName(String) - Static method in class org.openscience.nmrshiftdb.om.DBSpectrumTypePeer: Gets a DBSpectrumType by name attribute.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Retrieves a field from the object by name passed in as a String.
getByPeerName(String) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Retrieves a field from the object by name passed in as a String.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Retrieves a field from the object by Position as specified in the xml schema.
getByPosition(int) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Retrieves a field from the object by Position as specified in the xml schema.
getBySpectrumAndAtom(DBSpectrum, DBAtom) - Static method in class org.openscience.nmrshiftdb.om.DBCouplingPeer: Gets all couplings of an atom in a spectrum.
getByValue(String) - Static method in class org.openscience.nmrshiftdb.om.DBConditionPeer: Gets a DBCondition by a value
getByValueLike(String) - Static method in class org.openscience.nmrshiftdb.om.DBConditionPeer: Gets a DBCondition by a value compared with like
getCANNAME() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getCanonicalName() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the canonicalName of the DBMolecule object as a string, the names shortened and with a link to complete name.
getCanonicalNameNormal() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the canonicalName of the DBMolecule object as a string
getCanonicalNameType() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Get the CanonicalNameType
getCanonicalNameTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Get the CanonicalNameTypeId
getCanonicalNameTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Get the CanonicalNameTypeId
getCaptchaChallenge(String, Locale) - Method in class org.openscience.nmrshiftdb.CaptchaServlet
getCasNumber() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the CasNumber
getCASNUMBER() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getCasNumber() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the casNumber attribute of the SubmittingData object
getChemicalNamesAsOneString(boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the chemical names of the DBMolecule object as one string with ; seperation
getChemicalNamesAsOneString(boolean, boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the chemical names of the DBMolecule object as one string with either ; or \n\r seperation.
getChemicalNamesAsOneStringWithCR(boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the chemical names of the DBMolecule object as one string mit /n/r seperation
getChemicalNamesAsOneStringWithFallback() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the chemical names of the DBMolecule object as one string with either ; seperation and fallback to canonicalname/smiles.
getChemicalNamesMaxChars() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the chemicalNamesMaxChars attribute of the DBMolecule object
getChemicalNamesOrId() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the chemicalNames or, if empty, the id attribute of the DBMolecule object.
getCHEMNAME() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getChemName() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the chemName attribute of the SubmittingData object
getChemNameOnlyWithNewline() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the chemNameOnlyWithNewline attribute of the SubmittingData object
getCHEMNAMEPUBCHEM() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getChemNameWithSemicolon() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the chemNameWithSemicolon attribute of the SubmittingData object
getChemObjectReader(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets a chemObjectReader for a file.
getChoosen() - Method in class org.openscience.nmrshiftdb.om.DBSpectrumType
getChoosenSpectrumType() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the choosenSpectrumType attribute of the SubmittingData object
getCML(int, boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as CML.
getCML(int) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as CML, with Hs as entered.
getCmlEntryType() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Get the CmlEntryType
getCmlSpect() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets this spectrum as cmlSpect.
getCMLString(int) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as CML as a string.
getComment() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Comment
getComment() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the Comment
getComment() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Get the Comment
getCOMMENT() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getComment() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the comment attribute of the SubmittingData object
getCommentAsOneString() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the comments of all spectra of this molecule as one string with ; seperation
getCommentAsString() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the comment attribute of the DBSpectrum object
getCommentSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the CommentSoundex
getCondition(String) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the conditions of a certain type of the spectra of this molecule.
getConditionId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Get the ConditionId
getConditionId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Get the ConditionId
getConditionName() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Get the ConditionName
getConditionName() - Method in class org.openscience.nmrshiftdb.om.DBCondition: Gets the conditionName attribute of the DBConditionType object this DBCondition is associated with
getConditions() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the conditions attribute of the SubmittingData object, which is a ArrayList of DBConditionType objects
getConditionType() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Get the ConditionType
getConditionType() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the condition type of this DBSpectrum object
getConditionTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Get the ConditionTypeId
getConditionTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Get the ConditionTypeId
getConfigurationString() - Method in class org.openscience.nmrshiftdb.util.SubmittingData
getConfirmShifts() - Method in class org.openscience.nmrshiftdb.util.SubmittingData
getConnectedAtoms(IMolecule, DBAtom[]) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the atoms connected with this atom
getConnectedAtoms() - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the atoms connected with this atom
getConstant() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Get the Constant
getContainedFiles() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Get the ContainedFiles
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.BackupPortlet: Gets the HTML to be displayed in the portlet
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.BookmarkPortlet: Gets the HTML to be displayed in the portlet
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.CheckAssignmentsPortlet: Gets the HTML to be displayed in the portlet
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.DetailPortlet: Gets the HTML to be displayed in the portlet
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.KeywordPortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.MeasuredOrNotPortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.MyHomePortlet: Gets the HTML to be displayed in the portlet
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.PredictPortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.RestoreSavedSubmittingDataPortlet: Gets the HTML to be displayed in the portlet
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.ResultPortlet: Gets the HTML to be displayed in the portlet
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.ReviewPortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.SearchByNamePortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.SearchBySpectrumPortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.SearchByStructurePortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.SearchByWeightPortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.SearchHistoryPortlet: Gets the content to be displayed in the portlet as HTML
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.SubmitPortlet: Gets the content to be displayed in the portlet as HTML.
getContent(RunData) - Method in class org.openscience.nmrshiftdb.portlets.WebPagePortletWithURLFromRequest: This methods outputs the content of the portlet for a given request.
getContext(HttpSession, boolean, boolean, StringBuffer, Object, HttpServletRequest, boolean) - Static method in class org.openscience.nmrshiftdb.portlets.PredictPortlet: Builds a context for the predict page.
getContributor() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the contributor of this DBSpectrum object
getCoordinates(int) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the coordinates of this atom in a coordinate set with a certain coordinate set id.
getCoordinateSetNames() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the coordinateSetNames attribute of the DBMolecule object
getCoordinateSetTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Get the CoordinateSetTypeId
getCoordinateSetTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Get the CoordinateSetTypeId
getCoordinateSetTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Get the CoordinateSetTypeId
getCoupling(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets couplings[i][k].
getCouplings(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the couplings of this atom in a certain spectrum.
getCouplings() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the couplings attribute of the ValuesForVelocityBean object
getCouplingsString(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the couplings of this atom in a certain spectrum.as a string
getCurrentSelectedCondition() - Method in class org.openscience.nmrshiftdb.om.DBConditionType: Gets the currentSelectedCondition attribute of the DBConditionType object
getCurrentSelectedNumber() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the currentSelectedNumber attribute of the ValuesForVelocityBean object
getCurrentSpectrum() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gives you the current spectrum of the edit chain of this spectrum.
getCurrentValue() - Method in class org.openscience.nmrshiftdb.om.DBConditionType: Gets the currentValue attribute of the DBConditionType object
getDaemonConfig() - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
getDaemonEntry() - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBArticleMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBAtomMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBAuthorMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBBondDBAtomMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBBondMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBBookDBPublisherMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBBookMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBBookmarkMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameTypeMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBChemicalNameMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBConditionMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBConditionTypeMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet2dMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet3dMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSetTypeMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBCouplingMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBGuestbookMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBIdentifierMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBIsotopeMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBJournalMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBJournalVolumeMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBKeywordMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBLabGroupMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBLiteratureMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBMachineMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeDBKeywordMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeHyperlinkMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBPublisherMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBRawFileDBSpectrumMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBRawFileMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBReviewGroupDBUserMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBReviewGroupMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSampleMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSessionsMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBShiftMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSignalDBAtomMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSignalMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBConditionMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBKeywordMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBLiteratureMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumHyperlinkMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumTypeMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumEditMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMarkMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.DBWishlistMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.IsAuthorMapBuilder: Gets the databasemap this map builder built.
getDatabaseMap() - Method in class org.openscience.nmrshiftdb.om.map.IsEditorMapBuilder: Gets the databasemap this map builder built.
getDataType() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Get the DataType
getDate() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Get the Date
getDate() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Date
getDate() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the Date
getDate() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the Date
getDate() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Get the Date
getDBArticles() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: If this collection has already been initialized, returns the collection.
getDBArticles(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticles(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: If this collection has already been initialized, returns the collection.
getDBArticles(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesJoinDBJournalVolume(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesJoinDBLiteratureRelatedByLiteratureId(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesJoinDBLiteratureRelatedByPublishedInBook(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesRelatedByLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBArticlesRelatedByLiteratureId(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesRelatedByLiteratureId(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBArticlesRelatedByLiteratureId(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesRelatedByLiteratureIdJoinDBJournalVolume(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesRelatedByLiteratureIdJoinDBLiteratureRelatedByPublishedInBook(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesRelatedByPublishedInBook() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBArticlesRelatedByPublishedInBook(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesRelatedByPublishedInBook(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBArticlesRelatedByPublishedInBook(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesRelatedByPublishedInBookJoinDBJournalVolume(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBArticlesRelatedByPublishedInBookJoinDBLiteratureRelatedByLiteratureId(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBAtom() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Get the associated DBAtom object
getDBAtom() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Get the associated DBAtom object
getDBAtom() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Get the associated DBAtom object
getDBAtom() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Get the associated DBAtom object
getDBAtom() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Get the associated DBAtom object
getDBAtom(Connection) - Method in class org.openscience.nmrshiftdb.om.DBIdentifier
getDBAtomRelatedByAtomId1() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Get the associated DBAtom object
getDBAtomRelatedByAtomId2() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Get the associated DBAtom object
getDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBAtoms(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBAtoms(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBAtoms(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBAtomsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBAuthor() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Get the associated DBAuthor object
getDBAuthor() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Get the associated DBAuthor object
getDBBond() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Get the associated DBBond object
getDBBondDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBBondDBAtoms(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBondDBAtoms(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBBondDBAtoms(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBondDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: If this collection has already been initialized, returns the collection.
getDBBondDBAtoms(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBondDBAtoms(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: If this collection has already been initialized, returns the collection.
getDBBondDBAtoms(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBondDBAtomsJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBondDBAtomsJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBondDBAtomsJoinDBBond(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBondDBAtomsJoinDBBond(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookDBPublishers() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBBookDBPublishers(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookDBPublishers(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBBookDBPublishers(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookDBPublishers() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: If this collection has already been initialized, returns the collection.
getDBBookDBPublishers(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookDBPublishers(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: If this collection has already been initialized, returns the collection.
getDBBookDBPublishers(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookDBPublishersJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookDBPublishersJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookDBPublishersJoinDBPublisher(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookDBPublishersJoinDBPublisher(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookmarks() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBBookmarks(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookmarks(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBBookmarks(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookmarks() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBBookmarks(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookmarks(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBBookmarks(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookmarksJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookmarksJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookmarksJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBookmarksJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBooks() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBBooks(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBooks(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBBooks(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBBooksJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNames() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: If this collection has already been initialized, returns the collection.
getDBCanonicalNames(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNames(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: If this collection has already been initialized, returns the collection.
getDBCanonicalNames(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNames() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBCanonicalNames(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNames(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBCanonicalNames(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNamesJoinDBCanonicalNameType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNamesJoinDBCanonicalNameType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNamesJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNamesJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCanonicalNameType() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Get the associated DBCanonicalNameType object
getDBChemicalNames() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBChemicalNames(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBChemicalNames(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBChemicalNames(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBChemicalNamesJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCondition() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the associated DBCondition object
getDBCondition() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the associated DBCondition object
getDBCondition() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Get the associated DBCondition object
getDBConditions() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: If this collection has already been initialized, returns the collection.
getDBConditions(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBConditions(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: If this collection has already been initialized, returns the collection.
getDBConditions(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBConditions() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBConditions(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBConditions(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBConditions(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBConditionsJoinDBConditionType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBConditionsJoinDBConditionType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBConditionsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBConditionsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBConditionType() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Get the associated DBConditionType object
getDBConditionType(Connection) - Method in class org.openscience.nmrshiftdb.om.DBCondition
getDBCoordinateSet2ds() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBCoordinateSet2ds(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet2ds(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBCoordinateSet2ds(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet2ds() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized, returns the collection.
getDBCoordinateSet2ds(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet2ds(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized, returns the collection.
getDBCoordinateSet2ds(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet2dsJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet2dsJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet2dsJoinDBCoordinateSetType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet2dsJoinDBCoordinateSetType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet3ds() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBCoordinateSet3ds(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet3ds(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBCoordinateSet3ds(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet3ds() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized, returns the collection.
getDBCoordinateSet3ds(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet3ds(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized, returns the collection.
getDBCoordinateSet3ds(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet3dsJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet3dsJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet3dsJoinDBCoordinateSetType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSet3dsJoinDBCoordinateSetType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCoordinateSetType() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Get the associated DBCoordinateSetType object
getDBCoordinateSetType() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Get the associated DBCoordinateSetType object
getDBCouplings() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBCouplings(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplings(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBCouplings(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsJoinDBAtomRelatedByAtomId1(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsJoinDBAtomRelatedByAtomId2(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsRelatedByAtomId1() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBCouplingsRelatedByAtomId1(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsRelatedByAtomId1(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBCouplingsRelatedByAtomId1(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsRelatedByAtomId1JoinDBAtomRelatedByAtomId2(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsRelatedByAtomId1JoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsRelatedByAtomId2() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBCouplingsRelatedByAtomId2(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsRelatedByAtomId2(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBCouplingsRelatedByAtomId2(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsRelatedByAtomId2JoinDBAtomRelatedByAtomId1(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBCouplingsRelatedByAtomId2JoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDbe() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Dbe
getDBE_RINGS() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getDBGuestbooks() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBGuestbooks(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBGuestbooks(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBGuestbooks(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBGuestbooksJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIdentifiers() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBIdentifiers(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIdentifiers(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBIdentifiers(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIdentifiers() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBIdentifiers(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIdentifiers(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBIdentifiers(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIdentifiersJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIdentifiersJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIdentifiersJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIdentifiersJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIsotope(int) - Method in class org.openscience.nmrshiftdb.om.DBSpectrumType: Gets the dBIsotope in a certain axis.
getDBIsotopes() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized, returns the collection.
getDBIsotopes(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIsotopes(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized, returns the collection.
getDBIsotopes(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBIsotopesJoinDBSpectrumType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBJournal() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Get the associated DBJournal object
getDBJournalVolume() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the associated DBJournalVolume object
getDBJournalVolumes() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: If this collection has already been initialized, returns the collection.
getDBJournalVolumes(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBJournalVolumes(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: If this collection has already been initialized, returns the collection.
getDBJournalVolumes(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBJournalVolumesJoinDBJournal(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBKeyword() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Get the associated DBKeyword object
getDBKeyword() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Get the associated DBKeyword object
getDBKeyword() - Method in class org.openscience.nmrshiftdb.om.DBMoleculeDBKeyword: Calls getDBKeyword of Base class with caching.
getDBKeyword() - Method in class org.openscience.nmrshiftdb.om.DBSpectrumDBKeyword: Calls getDBKeyword of base class with caching.
getDBLabGroup() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the associated DBLabGroup object
getDBLabGroups() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBLabGroups(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBLabGroups(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBLabGroups(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBLabGroupsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBLiterature() - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Get the associated DBLiterature object
getDBLiterature() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Get the associated DBLiterature object
getDBLiterature() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Get the associated DBLiterature object
getDBLiterature() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Get the associated DBLiterature object
getDBLiterature() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Get the associated DBLiterature object
getDBLiterature() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Get the associated DBLiterature object
getDBLiteratureRelatedByLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the associated DBLiterature object
getDBLiteratureRelatedByPublishedInBook() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the associated DBLiterature object
getDBMachine() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the associated DBMachine object
getDBMachines() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized, returns the collection.
getDBMachines(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMachines(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized, returns the collection.
getDBMachines(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMachines() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: If this collection has already been initialized, returns the collection.
getDBMachines(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMachines(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: If this collection has already been initialized, returns the collection.
getDBMachines(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMachinesJoinDBCondition(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMachinesJoinDBCondition(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMachinesJoinDBLabGroup(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMachinesValid() - Method in class org.openscience.nmrshiftdb.om.DBLabGroup
getDbmol() - Method in class org.openscience.nmrshiftdb.util.SubmittingData
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the associated DBMolecule object
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Get the associated DBMolecule object
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Get the associated DBMolecule object
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Get the associated DBMolecule object
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Get the associated DBMolecule object
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Get the associated DBMolecule object
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the associated DBMolecule object
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the associated DBMolecule object
getDBMolecule() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Get the associated DBMolecule object
getDBMolecule(Connection) - Method in class org.openscience.nmrshiftdb.om.DBChemicalName
getDBMoleculeDBKeywords() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized, returns the collection.
getDBMoleculeDBKeywords(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeDBKeywords(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized, returns the collection.
getDBMoleculeDBKeywords(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeDBKeywords() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBMoleculeDBKeywords(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeDBKeywords(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBMoleculeDBKeywords(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeDBKeywordsJoinDBKeyword(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeDBKeywordsJoinDBKeyword(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeDBKeywordsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeDBKeywordsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeHyperlinks() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBMoleculeHyperlinks(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeHyperlinks(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBMoleculeHyperlinks(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculeHyperlinksJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMolecules() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBMolecules(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMolecules(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBMolecules(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBMoleculesJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBPublisher() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Get the associated DBPublisher object
getDBRawFile() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Get the associated DBRawFile object
getDBRawFileDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: If this collection has already been initialized, returns the collection.
getDBRawFileDBSpectrums(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFileDBSpectrums(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: If this collection has already been initialized, returns the collection.
getDBRawFileDBSpectrums(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFileDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBRawFileDBSpectrums(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFileDBSpectrums(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBRawFileDBSpectrums(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFileDBSpectrumsJoinDBRawFile(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFileDBSpectrumsJoinDBRawFile(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFileDBSpectrumsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFileDBSpectrumsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFiles() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: If this collection has already been initialized, returns the collection.
getDBRawFiles(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFiles(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: If this collection has already been initialized, returns the collection.
getDBRawFiles(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBRawFilesJoinDBSample(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBReviewGroup() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Get the associated DBReviewGroup object
getDBReviewGroupDBUsers() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: If this collection has already been initialized, returns the collection.
getDBReviewGroupDBUsers(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBReviewGroupDBUsers(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: If this collection has already been initialized, returns the collection.
getDBReviewGroupDBUsers(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBReviewGroupDBUsers() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBReviewGroupDBUsers(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBReviewGroupDBUsers(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBReviewGroupDBUsers(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBReviewGroupDBUsersJoinDBReviewGroup(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBReviewGroupDBUsersJoinDBReviewGroup(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBReviewGroupDBUsersJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBReviewGroupDBUsersJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSample() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Get the associated DBSample object
getDBSamples() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized, returns the collection.
getDBSamples(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamples(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized, returns the collection.
getDBSamples(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamples() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: If this collection has already been initialized, returns the collection.
getDBSamples(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamples(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: If this collection has already been initialized, returns the collection.
getDBSamples(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamples() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBSamples(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamples(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBSamples(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamples() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBSamples(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamples(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBSamples(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBCondition(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBCondition(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBCondition(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBCondition(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBMachine(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBMachine(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBMachine(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBMachine(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSamplesJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBShifts() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized, returns the collection.
getDBShifts(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBShifts(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized, returns the collection.
getDBShifts(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBShiftsArray() - Method in class org.openscience.nmrshiftdb.om.DBSignal: Gets the dBShiftsArray attribute of the DBSignal object
getDBShiftsJoinDBSignal(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignal() - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Get the associated DBSignal object
getDBSignal() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Get the associated DBSignal object
getDBSignalDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBSignalDBAtoms(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignalDBAtoms(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized, returns the collection.
getDBSignalDBAtoms(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignalDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized, returns the collection.
getDBSignalDBAtoms(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignalDBAtoms(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized, returns the collection.
getDBSignalDBAtoms(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignalDBAtomsJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignalDBAtomsJoinDBAtom(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignalDBAtomsJoinDBSignal(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignalDBAtomsJoinDBSignal(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignals() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSignals(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignals(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSignals(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSignals() - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the dBSignals attribute of the DBAtom object
getDBSignals(char) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the dBSignals attribute of the DBAtom object.
getDBSignals(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the dBSignals attribute of the DBAtom object
getDBSignalsBySpectrumType(String) - Method in class org.openscience.nmrshiftdb.om.DBAtom
getDBSignalsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Get the associated DBSpectrum object
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Get the associated DBSpectrum object
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Get the associated DBSpectrum object
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Get the associated DBSpectrum object
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Get the associated DBSpectrum object
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Get the associated DBSpectrum object
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Get the associated DBSpectrum object
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Get the associated DBSpectrum object
getDBSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Get the associated DBSpectrum object
getDBSpectrumDBConditions() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized, returns the collection.
getDBSpectrumDBConditions(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBConditions(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized, returns the collection.
getDBSpectrumDBConditions(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBConditions() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSpectrumDBConditions(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBConditions(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSpectrumDBConditions(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBConditionsJoinDBCondition(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBConditionsJoinDBCondition(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBConditionsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBConditionsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBKeywords() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized, returns the collection.
getDBSpectrumDBKeywords(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBKeywords(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized, returns the collection.
getDBSpectrumDBKeywords(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBKeywords() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSpectrumDBKeywords(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBKeywords(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSpectrumDBKeywords(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBKeywordsJoinDBKeyword(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBKeywordsJoinDBKeyword(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBKeywordsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBKeywordsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBLiteratures() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBSpectrumDBLiteratures(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBLiteratures(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getDBSpectrumDBLiteratures(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBLiteratures() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSpectrumDBLiteratures(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBLiteratures(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSpectrumDBLiteratures(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBLiteraturesJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBLiteraturesJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBLiteraturesJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumDBLiteraturesJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumHyperlinks() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSpectrumHyperlinks(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumHyperlinks(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBSpectrumHyperlinks(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumHyperlinksJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumNew() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Get the associated DBSpectrum object
getDBSpectrumOld() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Get the associated DBSpectrum object
getDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBSpectrums(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrums(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBSpectrums(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized, returns the collection.
getDBSpectrums(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrums(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized, returns the collection.
getDBSpectrums(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBSpectrums(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrums(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBSpectrums(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinDBSpectrumType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinDBSpectrumType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinDBSpectrumType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumType() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Get the associated DBSpectrumType object
getDBSpectrumType() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the associated DBSpectrumType object
getDBSpectrumType() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Get the associated DBSpectrumType object
getDBSpectrumTypes() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBSpectrumTypes(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumTypes(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBSpectrumTypes(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBSpectrumTypesJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumEdits() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrumEdits(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumEdits(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrumEdits(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumEdits() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrumEdits(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumEdits(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrumEdits(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumEditsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumEditsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumEditsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumEditsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumMarks() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrumMarks(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumMarks(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrumMarks(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumMarks() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrumMarks(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumMarks(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrumMarks(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumMarksJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumMarksJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumMarksJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumMarksJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrums(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrums(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrums(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrums(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrums(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBUserDBSpectrums(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumsJoinDBSpectrum(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBUserDBSpectrumsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlist(int) - Method in class org.openscience.nmrshiftdb.om.DBMolecule
getDBWishlists() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBWishlists(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlists(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized, returns the collection.
getDBWishlists(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlists() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized, returns the collection.
getDBWishlists(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlists(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized, returns the collection.
getDBWishlists(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlists() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBWishlists(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlists(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized, returns the collection.
getDBWishlists(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinDBMolecule(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinDBSpectrumType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinDBSpectrumType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinDBSpectrumType(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: If this collection has already been initialized with an identical criteria, it returns the collection.
getDBWishlistsJoinNmrshiftdbUser(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: If this collection has already been initialized with an identical criteria, it returns the collection.
getDefaultMachine() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the DefaultMachine
getDegree() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Get the Degree
getDELETE_SEARCH_HISTORY() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getDelta() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the delta attribute of the ValuesForVelocityBean object
getDeltaEsc() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the delta attribute of the ValuesForVelocityBean object.
getDescription() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Get the Description
getDescription() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Get the Description
getDescription() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Get the Description
getDescriptionSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Get the DescriptionSoundex
getDescriptionSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Get the DescriptionSoundex
getDescriptorSet(DBCondition, DBCondition, DBCondition, IAtomContainer, IAtom, IRingSet, int) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Creates a set of Desctiptors taken from Jens Meilers's publications and Aires-do-Sousa..
getDescriptorSetDoSousa(IAtomContainer, IAtom, IAtom, IRingSet, int) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Creates a set of Desctiptors taken from Aires-do-Sousa publications.
getDictRef() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Get the DictRef
getDigitsAfterComma(float) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Tells how many digits after the comma (or .) a float has got.
getDimensionality() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Get the Dimensionality
getDisplaymark() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Returns the mark necessary for a spectrum to be displayed
getDisplayText() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the displayText attribute of the ValuesForVelocityBean object
getDocbook(String, String) - Method in class org.openscience.nmrshiftdb.util.Export: Gets the spectrum and molecule as docbook
getDoi() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Get the Doi
getDoubleBondConfiguration() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the doubleBondConfiguration attribute of the SubmittingData object
getEasylink(HttpServletRequest) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets a link for imediate display of this molecule.
getEdit() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Get the Edit
getEditorOrder() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Get the EditorOrder
getEditSpectrum() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the editSpectrum attribute of the SubmittingData object
getElementSymbol() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Get the ElementSymbol
getElementSymbol() - Method in class org.openscience.nmrshiftdb.om.DBSpectrumType: Gets the elementSymbol of the isotope of theDBSpectrumType
getEmailOfAsssignedReviewer() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the email of the last reviewer the DBSpectrum object was assigned to
getEmailSignature(RunData) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets a standard email signature.
getEtAl() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Get the EtAl
getEtalbook() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the etalbook attribute of the DBLiterature object
getEtalprov() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the etalprov attribute of the DBLiterature object
getEXACT() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getExistingBookAuthors() - Static method in class org.openscience.nmrshiftdb.om.DBAuthorPeer: Gets a list of existing authors.
getExistingBookTitles() - Static method in class org.openscience.nmrshiftdb.om.DBBookPeer: Gets a list of titles and subtitles of existing monographs (i.
getExistingConditions() - Method in class org.openscience.nmrshiftdb.om.DBConditionType: Gets the existing DBConditions for this DBConditionType object ordered by frequency
getExistingMolecule(IMolecule, IMolecule, boolean[], ServletConfig, String, StringAndStringAndBoolean) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Tells if a molecule is already in the DB
getExistingMoleculeId() - Method in class org.openscience.nmrshiftdb.util.SubmittingData
getExistingMoleculeKeywords() - Static method in class org.openscience.nmrshiftdb.om.DBKeywordPeer: Gets all keywords assigned to any molecule.
getExistingMoleculeKeywords() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the existingMolecuelKeywords attribute of the SubmittingData object
getExistingMoleculeKeywordsAsArray() - Static method in class org.openscience.nmrshiftdb.om.DBKeywordPeer: Gets all keywords assigned to any molecule.
getExistingOrMakeNewOne(String, String, String, boolean, Connection, int, String, String, int) - Static method in class org.openscience.nmrshiftdb.om.DBBookPeer
getExistingSpectrumKeywords() - Static method in class org.openscience.nmrshiftdb.om.DBKeywordPeer: Gets all keywords assigned to any spectrum.
getExistingSpectrumKeywords() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the existingSpectrumKeywords attribute of the SubmittingData object
getExistingSpectrumKeywordsAsArray() - Static method in class org.openscience.nmrshiftdb.om.DBKeywordPeer: Gets all keywords assigned to any spectrum.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBond: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBook: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSample: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBShift: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Generate a list of field names.
getFieldNames() - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Generate a list of field names.
getFieldStrength() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the FieldStrength
getFilename() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the filename attribute of the DBMolecule object
getFilter(int, String) - Static method in class org.openscience.nmrshiftdb.util.PeakPicker: creates a filter based on Gaussian and derivatives.
getFingerprint() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the Fingerprint
getFinished() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the Finished
getFirstShift() - Method in class org.openscience.nmrshiftdb.om.DBSignal: Gets the Shift of the first dimension of the DBSignal object
getFormalCharge() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the FormalCharge
getFORMULA() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getFORMULA_WITH_OTHER() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getFp0() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp0
getFp1() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp1
getFp10() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp10
getFp11() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp11
getFp12() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp12
getFp13() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp13
getFp14() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp14
getFp15() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp15
getFp2() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp2
getFp3() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp3
getFp4() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp4
getFp5() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp5
getFp6() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp6
getFp7() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp7
getFp8() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp8
getFp9() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Fp9
getFRAGMENT() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getFrequency() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum
getFrequency() - Method in class org.openscience.nmrshiftdb.util.SubmittingData
getFrom() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the from attribute of the DBLiterature object
getFromXMLString(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets an object from an JSX xml string.
getFUZZY() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getGuestbookId() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Get the GuestbookId
getHetero() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the Hetero
getHoseCode() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the HoseCode
getHOSECODE() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getHoseCodeWithRings() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the HoseCodeWithRings
getHtml(HttpServletRequest) - Method in class org.openscience.nmrshiftdb.util.Export: Gets the molecule/spectrum as a simple html file
getHydrogenCount() - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the nubmer of hydrogens connected to the DBAtom
getHydrogenCount(DBAtom[], IMolecule) - Method in class org.openscience.nmrshiftdb.om.DBAtom
getHyperlink() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Get the Hyperlink
getHyperlink() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Get the Hyperlink
getIdentifier() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Get the Identifier
getIdentifier(int) - Method in class org.openscience.nmrshiftdb.om.DBAtom
getIdentifier(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the identifier attribute of the DBAtom object in a certain spectrum.
getIdentifier() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the identifier attribute of the ValuesForVelocityBean object
getIdentifierEsc() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the identifier attribute of the ValuesForVelocityBean object, & escaped.
getIdentifiers() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the identifiers attribute of the SubmittingData object
getIdOfUnreviewedSpectrum(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the id of an unreviewed spectrum of this molecule assigned to a certain user.
getImage(boolean, String, String, boolean) - Method in class org.openscience.nmrshiftdb.util.Export: Gets an image of spectrum or molecule, width/height set to a reasonable value for molecules (Hint: don't use this for spectra).
getImage(boolean, String, String, int, int, boolean, DBAtom[]) - Method in class org.openscience.nmrshiftdb.util.Export: Gets an image of spectrum or molecule
getInchi() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the inchi (from db, not generatad) for this molecule.
getInstance() - Static method in class org.openscience.nmrshiftdb.util.CaptchaServiceSingleton
getInstance() - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
getInt() - Method in class org.openscience.nmrshiftdb.util.StringAndInt: Gets the int attribute of the StringAndInt object
getInteger() - Method in class org.openscience.nmrshiftdb.util.StringAndInt: Gets the integer attribute of the StringAndInt object
getIntegralStuff(DBAtom[], IMolecule) - Method in class org.openscience.nmrshiftdb.om.DBAtom
getIntegralStuff() - Method in class org.openscience.nmrshiftdb.om.DBAtom
getIntensity() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Get the Intensity
getIntensity() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the intensity attribute of the ValuesForVelocityBean object
getIntensityEsc() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the intensity attribute of the ValuesForVelocityBean object
getIntensityFormatted() - Method in class org.openscience.nmrshiftdb.om.DBSignal: Gets the intensity attribute of the DBSignal object formatted like x.xx.
getIsAromatic() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the IsAromatic
getIsAromatic() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Get the IsAromatic
getIsAuthors() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized, returns the collection.
getIsAuthors(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsAuthors(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized, returns the collection.
getIsAuthors(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsAuthors() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getIsAuthors(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsAuthors(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getIsAuthors(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsAuthorsJoinDBAuthor(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsAuthorsJoinDBAuthor(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsAuthorsJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsAuthorsJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsChoosen() - Method in class org.openscience.nmrshiftdb.om.DBKeyword: Gets the isChoosen attribute of the DBKeyword object
getIsConfigurationSpecified() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Get the IsConfigurationSpecified
getIsDoubleBondSpecified() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the isDoubleBondSpecified attribute of the SubmittingData object
getIsEditors() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized, returns the collection.
getIsEditors(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsEditors(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized, returns the collection.
getIsEditors(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsEditors() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getIsEditors(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsEditors(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized, returns the collection.
getIsEditors(Criteria, Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsEditorsJoinDBAuthor(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsEditorsJoinDBAuthor(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsEditorsJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsEditorsJoinDBLiterature(Criteria) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: If this collection has already been initialized with an identical criteria, it returns the collection.
getIsHttps() - Method in class org.openscience.nmrshiftdb.util.UrlTool: Tells if the current connection is by https or not.
getIsInRange() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the isInRange attribute of the ValuesForVelocityBean object
getIsomerLinks(String, String, String, HttpSession) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Builds a link to isomers of this molecule.
getIssue() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the issue attribute of the DBLiterature object
getIssueNumber() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the IssueNumber
getIsVisible() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the IsVisible
getIta() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Get the Ita
getIta() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the ita attribute of the DBLiterature object
getJetspeedprops() - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
getJournalId() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Get the JournalId
getJournalId() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Get the JournalId
getJournalsubtitle() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the journalsubtitle attribute of the DBLiterature object
getJournaltitle() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the journaltitle attribute of the DBLiterature object
getJournalVolumeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Get the JournalVolumeId
getKeepAssignmentEntries() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the keepAssignmentEntries attribute of the SubmittingData object
getKeyword() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Get the Keyword
getKeywordId() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Get the KeywordId
getKeywordId() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Get the KeywordId
getKeywordId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Get the KeywordId
getKeywords() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the keywords of the DBMolecule object as one string with ; seperation
getKeywords(boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the keywords of the DBMolecule object as one string with ; or \n\r seperation.
getKeywords() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the keywords attribute of the DBSpectrum object.
getKeywords(boolean) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the keywords attribute of the DBSpectrum object.
getKeywordSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Get the KeywordSoundex
getLabgroupId() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Get the LabgroupId
getLabgroupId() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the LabgroupId
getLabgroupName() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Get the LabgroupName
getLabGroups() - Method in class org.openscience.nmrshiftdb.util.UrlTool
getLeader() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Get the Leader
getLevel() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the level attribute of the SubmittingData object
getLinks() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the links of the DBMolecule object
getLinks() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the links of the DBSpectrum object
getLinksAsString() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the links+their descriptoin of the DBMolecule object as one string with one links+description in one line
getLinksAsString() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the links of the DBSpectrum object as a string
getLiterature() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the Literature
getLiterature() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the literature attribute of the SubmittingData object
getLITERATURE_AUTHOR() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getLITERATURE_TITLE() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getLiteratureAsOneString() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the literature attributes of all spectra of the DBMolecule object as one string with ; seperation
getLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the LiteratureId
getLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Get the LiteratureId
getLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Get the LiteratureId
getLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Get the LiteratureId
getLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Get the LiteratureId
getLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Get the LiteratureId
getLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Get the LiteratureId
getLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Get the LiteratureId
getLiteraturesNew() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the DBLiterature objects of the DBSpectrum object
getLiteratureSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the LiteratureSoundex
getLower() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the lower attribute of the ValuesForVelocityBean object
getLowerAsInt() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the lower attribute of the ValuesForVelocityBean object as an integer
getLowestLoadServer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Get the LowestLoadServer
getMachine() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the Machine
getMachineId() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the MachineId
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer
getMapBuilder() - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer
getMappingCode(char) - Static method in class org.openscience.nmrshiftdb.util.Soundex: Gives the soundex of a letter (figures are coded as themselves)
getMark() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Get the Mark
getMark() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the mark of the DBSpectrum object
getMarkComment() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the Comments for marks of the DBSpectrum object.
getMarkDate() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Get the MarkDate
getMatchingSearchShift(List, List, double, Vector, boolean) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Creates a map with shifts as keys and the nearest match in the search spectrum as value
getMaxValue(double[]) - Static method in class org.openscience.nmrshiftdb.util.ArrayUtils: static method for getting the maximum value of an array of doubles
getMdlNumber() - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the mdl number of the Atom.
getMdlNumberPlus1() - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the mdlNumber value + 1
getMdlNumberPlus1(DBAtom, DBAtom[]) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the mdl number of an atom, similar to getMdlNumberPlus1 in DBAtom, but much faster for repeated calls
getMdlNumberPlus1Heavy() - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the mdlNumber value + 1, if atom is a heavy atom of the atom itself, if a hydrogen, of the heavy atom it is attached to.
getMeAsSubmittingData(boolean, String, boolean) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: This makes a submittingData object populated with the values from this spectrum and its molecule.
getMeasureChanger() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the MeasureChanger
getMeasuredOrCalculated() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the measuredOrCalculated attribute of the SubmittingData object
getMeasurementConditions() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the Conditions of this DBSpectrum object
getMeasurementConditions(Connection) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the Conditions of this DBSpectrum object
getMeasurementConditionValueWithName(String) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum
getMeasurementConditionWithName(String) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the value of a certain condition of this DBSpectrum object
getMeasurementConditionWithName(String, Connection) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the value of a certain condition of this DBSpectrum object
getMeasureOperator() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the MeasureOperator
getMeasureSelf() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the MeasureSelf
getMembers() - Method in class org.openscience.nmrshiftdb.om.DBLabGroup
getMessage() - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
getMinValue(double[]) - Static method in class org.openscience.nmrshiftdb.util.ArrayUtils: static method for getting the minimum value of an array of doubles
getModelBuilder(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets the modelBuilder attribute of the GeneralUtils class
getMolecularFormula(boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the molecular formula of the DBMolecule object.
getMolecularWeight() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the MolecularWeight
getMolecularWeightFloat() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Get the MolecularWeight
getMolecule() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the molecule attribute of the SubmittingData object
getMOLECULE_NR() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the MoleculeId
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Get the MoleculeId
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Get the MoleculeId
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Get the MoleculeId
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the MoleculeId
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Get the MoleculeId
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Get the MoleculeId
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the MoleculeId
getMoleculeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Get the MoleculeId
getMoleculeKeywords() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the moleculeKeywords attribute of the SubmittingData object
getMoleculeKeywordsAsOneString() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the keywords of the DBMolecule object as one string with ; seperation
getMoleculeKeywordsAsOneString(String) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the keywords of the DBMolecule object as one string with a given seperation
getMoleculeLinks() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the moleculeLink attribute of the SubmittingData object
getMoleculeLinksAsLinks() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the moleculeLinks, formatted as html.
getMoleculeLinksAsOneString() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the description of the links of the DBMolecule object as one string with ; seperation
getMOLKEY() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getMOLLINK() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getMolSvg(boolean) - Method in class org.openscience.nmrshiftdb.util.Export: Gets the molecule as an svg, with and height set to a reasonable value for the molecule.
getMolSvg(int, int, boolean) - Method in class org.openscience.nmrshiftdb.util.Export: Gets the molecule as an svg
getMolWithH() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the molWithH attribute of the SubmittingData object
getMolWithHCount() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the molWithHCount attribute of the SubmittingData object
getMultiplicity() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Get the Multiplicity
getMultiplicity(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets a string giving the multiplicity and coupling constants of the signal of this atom in a certain spectrum.
getMultiplicity(int, boolean) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Returns a letter multiplicity from an int.
getMULTIPLICITY() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getMultiplicity(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the multiplicity of a certain atom.
getMultiplicity() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the multiplicity attribute of the ValuesForVelocityBean object
getMultiplicity() - Method in class org.openscience.nmrshiftdb.util.ValueTriple: Returns the multiplicity as letter (0 Hs=S, 1H=D ...).
getMYSPECTRA() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getMySpectraInscription(User) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the inscription of the result field if a user wants to see his spectra
getName() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Get the Name
getName() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Get the Name
getName() - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Get the Name
getName() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the Name
getName() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Get the Name
getName() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Get the Name
getNameAsString() - Method in class org.openscience.nmrshiftdb.om.DBSpectrumType
getNameForElements() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the nameForElements attribute of the ValuesForVelocityBean object
getNameFormatted() - Method in class org.openscience.nmrshiftdb.om.DBSpectrumType: Gets the name of the DBSpectrumType object formatted for HTML.
getNameOfAsssignedReviewer() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the name of the last reviwer the DBSpectrum object was assigned to
getNameSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Get the NameSoundex
getNameSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Get the NameSoundex
getNameTotal() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Get the NameTotal
getNameTotalSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Get the NameTotalSoundex
getNewMoleculeIdsOfOldSpectra() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the current moleculeIds of all spectra, which were once assigned to this molecule and have been edited and are now assigned to another spectrum.
getNicePublisher() - Method in class org.openscience.nmrshiftdb.om.DBPublisher: Gets the name of the publisher as a nice string.
getNiceTitle() - Method in class org.openscience.nmrshiftdb.om.DBJournal: Formats the title of this journal like tile.subtitle (ita).
getNmrshiftdbProperty(String, ServletConfig) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets a property from the NMRSHiftDB.properties file
getNmrshiftdbProperty(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets a property from the NMRSHiftDB.properties file (the nmrprops argument needs to be set before!).
getNmrshiftdbProperty(String, RunData) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets a property from the NMRSHiftDB.properties file
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Get the associated NmrshiftdbUser object
getNmrshiftdbUser() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Get the associated NmrshiftdbUser object
getNumberOfCalculatedSpectra() - Method in class org.openscience.nmrshiftdb.util.DatabaseStatistics: Gets the numberOfCalculatedSpectra attribute of the DatabaseStatistics object
getNumberOfMeasuredSpectra() - Method in class org.openscience.nmrshiftdb.util.DatabaseStatistics: Gets the numberOfMeasuredSpectra attribute of the DatabaseStatistics object
getNumberOfNonHAtoms() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the number of non-H atoms of the DBMolecule object
getNumberOfSpectra() - Method in class org.openscience.nmrshiftdb.util.DatabaseStatistics: Gets the numberOfSpectra attribute of the DatabaseStatistics object
getNumberOfStructures() - Method in class org.openscience.nmrshiftdb.util.DatabaseStatistics: Gets the numberOfStructures attribute of the DatabaseStatistics object
getNumberOfUsers() - Method in class org.openscience.nmrshiftdb.util.DatabaseStatistics: Gets the numberOfUsers attribute of the DatabaseStatistics object
getOldOrMakeNew(String, String, Connection) - Static method in class org.openscience.nmrshiftdb.om.DBAuthorPeer: Either gets an old author with the given data, if existing, or creates a new one if not.
getOldOrMakeNew(String, String, String, Connection) - Static method in class org.openscience.nmrshiftdb.om.DBJournalPeer: Either gets a journal with the given data, if existing, or creates a new one.
getOldOrMakeNew(DBJournal, int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.DBJournalVolumePeer: Gets a DBJournalVolume with these data, if existing, or creates a new one.
getOldOrMakeNew(String, String, Connection) - Static method in class org.openscience.nmrshiftdb.om.DBPublisherPeer: Gets a publisher with these data, if existing, or makes a new one.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: The class that the Peer will make instances of.
getOMClass() - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: The class that the Peer will make instances of.
getOnChangeCode() - Method in class org.openscience.nmrshiftdb.om.DBMachine
getOptions() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the shifts table for this spectrum.
getOrderNumber() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Get the OrderNumber
getOtherNuclei() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the OtherNuclei
getOtherSpectraString(int) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum
getOtherSpectraStringHeader() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum
getOtherSpectraStringSize() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum
getOtherWishedSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the OtherWishedSpectrum
getPagesFrom() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the PagesFrom
getPagesTo() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the PagesTo
getPathList(File) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: break a path down into individual elements and add to a list.
getPeakArray() - Method in class org.openscience.nmrshiftdb.util.PeakPicker
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: returns a peer instance associated with this om.
getPeer() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: returns a peer instance associated with this om.
getPlace() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Get the Place
getPlace() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the place attribute of the DBLiterature object
getPlaceFromDB() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the place the DBLiterature object has been published.
getPossibleAtomNumbers() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the possibleAtomNumbers attribute of the ValuesForVelocityBean object
getPOTMULTIPLICITY() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: returns an id that differentiates this object from others of its class.
getPrimaryKey() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: returns an id that differentiates this object from others of its class.
getProbableStructure() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the ProbableStructure
getProcess() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the Process
getProtonClass(IMolecule, int, IRingSet) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Gets the proton Class of a proton according to aires-do-sousa/gasteiger system.
getPublishedInBook() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the PublishedInBook
getPublishedInBook() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Tells which book this item is published in.
getPublishedInJournal() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Get the PublishedInJournal
getPublisher() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the publisher attribute of the DBLiterature object
getPublisherFromDB() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the name of the publisher the DBLiterature has been published by.
getPublisherId() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Get the PublisherId
getPublisherId() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Get the PublisherId
getPublisherNameFromDB() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the name of the publisher the DBLiterature has been published by.
getRandomId() - Method in class org.openscience.nmrshiftdb.util.UrlTool
getRange() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the range attribute of the ValuesForVelocityBean object
getRangeWithoutZeros(RunData) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the range attribute formatted without the assignemnts and intensities, if zero.
getRawFileId() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Get the RawFileId
getRawFileId() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Get the RawFileId
getReader(String) - Method in class org.openscience.nmrshiftdb.portlets.WebPagePortletWithURLFromRequest: took this from FileServerPortlet as it was private
getREGEXP() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getRelativePath(File, File) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: get relative path of File 'f' with respect to 'home' directory example : home = /a/b/c f = /a/d/e/x.txt s = getRelativePath(home,f) = ../../d/e/x.txt
getRequired() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Get the Required
getResult() - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
getReviewAssignments() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the DBUserDBSpectrum objects related with this spectrum
getReviewDate() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Get the ReviewDate
getReviewFlag() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the ReviewFlag
getReviewgroupId() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Get the ReviewgroupId
getReviewgroupId() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Get the ReviewgroupId
getReviewgroupName() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Get the ReviewgroupName
getReviewKey() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the ReviewKey
getSampleId() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Get the SampleId
getSampleId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the SampleId
getSar() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Sar
getSearches(HttpSession) - Static method in class org.openscience.nmrshiftdb.portlets.ResultPortlet: Gets the searches attribute of the session
getServerOverview() - Method in class org.openscience.nmrshiftdb.util.UrlTool: Gets an overview of nmrshiftdb servers by rendering servers.xml.
getSessions() - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Get the Sessions
getSessionsAll() - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Get the SessionsAll
getSessionsNumber() - Method in class org.openscience.nmrshiftdb.util.DatabaseStatistics: Gets the number of open sessions on this server (i.
getShifts(int, DBMolecule) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the shifts of a certain atom in this spectrum.
getShifts(int) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the shifts of a certain atom in this spectrum.
getShort(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
getShortInChI(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
getSignalId() - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Get the SignalId
getSignalId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Get the SignalId
getSignalId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Get the SignalId
getSignals(int, DBMolecule) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the shifts of a certain atom in this spectrum.
getSignals(int) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the shifts of a certain atom in this spectrum.
getSignalstable() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the signalstable attribute of the SubmittingData object
getSimilarity() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Returns the similarity in percent between this spectrum and another spectrum, set by initSimilarity
getSimilarityFormatted() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Returns the similarity with two digits after .
getSimpleSpecfile() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the SimpleSpecfile
getSmilesString() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the SmilesString
getSmilesStringChiral() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the SmilesStringChiral
getSmilesStringChiralStr() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the smilesStringChiral attribute of the DBMolecule object as a string.
getSmilesStringStr() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the smilesString attribute of the DBMolecule object as a string.
getSmtpServer(RunData) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets the smtpServer from TurbineRessources.properties
getSmtpServer(ServletConfig) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets the smtpServer from TurbineRessources.properties
getSolvent() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the Solvent
getSolventValues() - Static method in class org.openscience.nmrshiftdb.om.DBConditionPeer
getSortPosition() - Method in class org.openscience.nmrshiftdb.util.ValueTriple: Gets the sortPosition attribute of the ValueTriple object
getSpecfile() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the Specfile
getSpecfile() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum
getSpecfileOld() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum
getSpecialCare() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the SpecialCare
getSPECKEY() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getSPECLINK() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getSpecSvg(int, int) - Method in class org.openscience.nmrshiftdb.util.Export: Gets the spectrum as svg which was set by the constructor.
getSpecSvg(int, int, DBAtom[]) - Method in class org.openscience.nmrshiftdb.util.Export: Gets the spectrum as svg which was set by the constructor.
getSpecSvg(DBSpectrum, int, int, boolean, DBAtom[]) - Method in class org.openscience.nmrshiftdb.util.Export: Gets a spectrum as svg, given by spectrum
getSpecSvg(String, String, String, int, int, boolean) - Static method in class org.openscience.nmrshiftdb.util.Export: Gets a spectrum as svg, given by specfile
getSPECTRUM_NR() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getSpectrumForApplet() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the specFile attribute of the DBSpectrum object as a string
getSpectrumForApplet() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Calls getSpectrumForApplet(false).
getSpectrumForApplet(boolean) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Return the spectrum in a String, formatted as needed for the spectrumApplet
getSpectrumForAppletNewFormat() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the spectrum in the format needed for the new spectrumapplet (R 1.0).
getSpectrumForAppletNewFormat(DBAtom[], IMolecule) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the spectrum in the format needed for the new spectrumapplet (R 1.0).
getSpectrumForAppletWithMultis() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Get the SpectrumId
getSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Get the SpectrumId
getSpectrumid() - Method in class org.openscience.nmrshiftdb.util.SubmittingData
getSpectrumIdNew() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Get the SpectrumIdNew
getSpectrumIdOld() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Get the SpectrumIdOld
getSpectrumIds() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets a string with the ids of all valid spectra of this molecule
getSpectrumKeywords() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the spectrumKeywords attribute of the SubmittingData object
getSpectrumKeywordsAsOneString() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the keywords of all spectra of the DBMolecule object as one string with ; seperation
getSpectrumLinks() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the spectrumLink attribute of the SubmittingData object
getSpectrumLinksAsLinks() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the spectrumLinks, formatted as html.
getSpectrumLinksAsOneString() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the links of all spectra of the DBMolecule object as one string with ; seperation
getSpectrumTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Get the SpectrumTypeId
getSpectrumTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the SpectrumTypeId
getSpectrumTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Get the SpectrumTypeId
getSpectrumTypeId() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Get the SpectrumTypeId
getSpectrumTypeName() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gets the spectrumType name of the DBSpectrum object
getSpectrumTypes(Document) - Method in interface org.openscience.nmrshiftdb.webservices.NMRShiftDB
getSpectrumTypes(Document) - Method in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
getSssr() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the Sssr
getStartLayers(String) - Static method in class org.openscience.nmrshiftdb.AdminPanel
getStatistics(int) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the ith values of the statistics attribute of the ValuesForVelocityBean object.
getStatistics2(int) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the ith values of the statistics2 attribute of the ValuesForVelocityBean object.
getStatus() - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon: Return the status for this Daemon
getStereo() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Get the Stereo
getString() - Method in class org.openscience.nmrshiftdb.util.StringAndInt: Gets the string attribute of the StringAndInt object
getString1() - Method in class org.openscience.nmrshiftdb.util.StringAndStringAndBoolean
getString2() - Method in class org.openscience.nmrshiftdb.util.StringAndStringAndBoolean
getStructureFile(int, boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as an MDL mol file, with Hs entered by user as explicit Hs, with no sdfields.
getStructureFile(int, Map, boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets this molecule as an MDL mol file, with Hs entered by user as explicit Hs.
getSUBSPECTRUM() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getSUBSTRUCTURE_EXACT() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getSUBSTRUCTURE_SIMILARITY() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getSubtitle() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Get the Subtitle
getSubtitle() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Get the Subtitle
getSubtitlebook() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the subtitlebook attribute of the DBLiterature object
getSubtitlebookForHtml() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the subtitlebook with " escaped for html.
getSubtitleForHtml() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the subtitle with " escaped for html.
getSurname() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Get the Surname
getSymbol() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Get the Symbol
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Returns the TableMap related to this peer.
getTableMap() - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Returns the TableMap related to this peer.
getText() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Get the Text
getTitle() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Get the Title
getTitle() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Get the Title
getTitlebook() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the titlebook attribute of the DBLiterature object
getTitlebookForHtml() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the titlebook with " escaped for html.
getTitleForHtml() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the title with " esacped for html
getTitleTotal() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Get the TitleTotal
getTitleTotalSoundex() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Get the TitleTotalSoundex
getTo() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the to attribute of the DBLiterature object
getTOTALSTRUCTURE() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getTurbineUser() - Method in class org.openscience.nmrshiftdb.om.DBWishlist: Get the associated NmrshiftdbUser object
getTurbineUser(JetspeedRunData) - Method in class org.openscience.nmrshiftdb.util.UrlTool
getTuser() - Static method in class org.openscience.nmrshiftdb.util.UrlTool
getType() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the type attribute of the DBLiterature object.
getTypesC() - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
getTypesH() - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
getUnassignedSignals() - Method in class org.openscience.nmrshiftdb.util.SubmittingData
getUnassignedText() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Gives a string with the unassigned shifts in this spectrum, "" if none.
getUnits() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Get the Units
getUnusedText() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Returns a text telling unsed spectra.
getUpper() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the upper attribute of the ValuesForVelocityBean object
getUrl() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Get the Url
getUrl() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Get the Url
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Get the UserId
getUserId() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Get the UserId
getUserName() - Method in class org.openscience.nmrshiftdb.om.DBGuestbook: Returns name of user who wrote this.
getUserNumber(Document) - Method in interface org.openscience.nmrshiftdb.webservices.NMRShiftDB
getUserNumber(Document) - Method in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
getUsers(String) - Method in class org.openscience.nmrshiftdb.util.UrlTool: Gets the number of users on a certain server.
getUsersId() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the UsersId
getUsersIdComment() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the UsersIdComment
getUsersIdCommentIsSet() - Method in class org.openscience.nmrshiftdb.om.DBSample
getUsersMap() - Static method in class org.openscience.nmrshiftdb.util.UrlTool
getUserSpectrumId() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Get the UserSpectrumId
getValid() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Get the Valid
getValid() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Get the Valid
getValidMachinesOfGroup(int) - Static method in class org.openscience.nmrshiftdb.om.DBMachinePeer
getValidProcessing() - Method in class org.openscience.nmrshiftdb.om.DBMachine
getValue() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Get the Value
getValue() - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Get the Value
getValue() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the value attribute of the ValuesForVelocityBean object
getValue1() - Method in class org.openscience.nmrshiftdb.util.ValueTriple: Gets the value1 attribute of the ValueTriple object as a string (needed for velocity, which can't access attributes, only methods)
getValue2() - Method in class org.openscience.nmrshiftdb.util.ValueTriple: Gets the value2 attribute of the ValueTriple object as a string (needed for velocity, which can't access attributes, only methods)
getValueAsInt() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the value attribute of the ValuesForVelocityBean object as an Integer.
getValueAsIntPlus1() - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Gets the value attribute +1 of the ValuesForVelocityBean object as an Integer.
getValuesForAtom(int, String) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Gets the signals assigned to an atom out of the specfile as contained in specfile attribute of Spectrum in the database as a String like 1.2,3.4,...
getValuesForAtomWithNumber(int, String, double, int) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Gets the signals assigned to an atom out of the specfile as contained in specfile attribute of Spectrum in the database as a String like 1.2,3.4,...
getVectorWithSessionBindingAttributeFromSession(HttpSession, String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Gets an ArrayListWithSessionBinding attribute from the session
getVolume() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Get the Volume
getVolume() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the volume attribute of the DBLiterature object
getWebPageContent(RunData, PortletConfig) - Method in class org.openscience.nmrshiftdb.portlets.WebPagePortletWithURLFromRequest
getWEIGHT() - Method in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
getWishedSpectrum() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Get the WishedSpectrum
getXCoordinate() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Get the XCoordinate
getXCoordinate() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Get the XCoordinate
getYCoordinate() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Get the YCoordinate
getYCoordinate() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Get the YCoordinate
getYear() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Get the Year
getYear() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Get the Year
getYear() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the year attribute of the DBLiterature object
getYearFromDB() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Gets the publishing year the DBLiterature has been published in.
getZCoordinate() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Get the ZCoordinate
GUESTBOOK_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: the column name for the GUESTBOOK_ID field
guestbookId - Variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: The value for the guestbookId field
GuestbookPortletAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets: Handles actions for the GuestbookPortlet
GuestbookPortletAction() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.GuestbookPortletAction

H

handleEntry(RunData, Context, String) - Method in class org.openscience.nmrshiftdb.modules.actions.portlets.WishlistPortletAction: puts an entry into wishlist.
handleFingerprints1() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Sets fingerprints to 0 and saves old values.
handleFingerprints2(Connection) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Inserts fingerprint values from handleFingerprints1 via a prepared statement.
hasAny3d() - Method in class org.openscience.nmrshiftdb.om.DBMolecule
hasAnyIdentifier() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Tells if there is any atom identifier for this spectrum.
hasAnyIntensities() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Tells if any signal in this spectrum has an intensity != 0.
hasCoordinates(int) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Tells if a coordinateset with setid exists.
hasCouplings(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Gets the couplings of this atom in a certain spectrum.as a string
hasMultiplicity() - Method in class org.openscience.nmrshiftdb.om.DBSignal: Tells if a signal has a multiplictiy (i.
hcg - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
hetero - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the hetero field
HETERO - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the HETERO field
hexEncode(byte[]) - Static method in class org.openscience.nmrshiftdb.util.GenerateId: The byte[] returned by MessageDigest does not have a nice textual representation, so some form of encoding is usually performed.
HOSE_CODE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the HOSE_CODE field
HOSE_CODE_WITH_RINGS - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the HOSE_CODE_WITH_RINGS field
hoseCode - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the hoseCode field
HOSECODE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
hoseCodeWithRings - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the hoseCodeWithRings field
hyperlink - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: The value for the hyperlink field
HYPERLINK - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: the column name for the HYPERLINK field
hyperlink - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: The value for the hyperlink field
HYPERLINK - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: the column name for the HYPERLINK field

I

identifier - Variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: The value for the identifier field
IDENTIFIER - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: the column name for the IDENTIFIER field
identifier - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
IdentifierComparator - Class in org.openscience.nmrshiftdb.util: This is implememtation of Comparator used for sorting ValueaForVelocityBeans accoring to the identifier.
IdentifierComparator() - Constructor for class org.openscience.nmrshiftdb.util.IdentifierComparator
identifiers - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
init(DaemonConfig, DaemonEntry) - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon: Init this Daemon from the DaemonFactory
init() - Method in class org.openscience.nmrshiftdb.InitServlet
init() - Method in class org.openscience.nmrshiftdb.portlets.WebPagePortletWithURLFromRequest
init(Object) - Method in class org.openscience.nmrshiftdb.util.UrlTool: Init from ApplicationTool interface.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Class object initialization method.
initClass(String) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: Class object initialization method.
initDBArticles() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Temporary storage of collDBArticles to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBArticlesRelatedByLiteratureId() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Temporary storage of collDBArticlesRelatedByLiteratureId to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBArticlesRelatedByPublishedInBook() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Temporary storage of collDBArticlesRelatedByPublishedInBook to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBAtoms to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBBondDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Temporary storage of collDBBondDBAtoms to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBBondDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Temporary storage of collDBBondDBAtoms to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBBookDBPublishers() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Temporary storage of collDBBookDBPublishers to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBBookDBPublishers() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Temporary storage of collDBBookDBPublishers to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBBookmarks() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBBookmarks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBBookmarks() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBBookmarks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBBooks() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Temporary storage of collDBBooks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCanonicalNames() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Temporary storage of collDBCanonicalNames to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCanonicalNames() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBCanonicalNames to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBChemicalNames() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBChemicalNames to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBConditions() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Temporary storage of collDBConditions to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBConditions() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBConditions to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCoordinateSet2ds() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Temporary storage of collDBCoordinateSet2ds to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCoordinateSet2ds() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Temporary storage of collDBCoordinateSet2ds to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCoordinateSet3ds() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Temporary storage of collDBCoordinateSet3ds to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCoordinateSet3ds() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Temporary storage of collDBCoordinateSet3ds to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCouplings() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBCouplings to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCouplingsRelatedByAtomId1() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Temporary storage of collDBCouplingsRelatedByAtomId1 to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBCouplingsRelatedByAtomId2() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Temporary storage of collDBCouplingsRelatedByAtomId2 to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBGuestbooks() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBGuestbooks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBIdentifiers() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Temporary storage of collDBIdentifiers to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBIdentifiers() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Temporary storage of collDBIdentifiers to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBIsotopes() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Temporary storage of collDBIsotopes to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBJournalVolumes() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Temporary storage of collDBJournalVolumes to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBLabGroups() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBLabGroups to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBMachines() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Temporary storage of collDBMachines to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBMachines() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Temporary storage of collDBMachines to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBMoleculeDBKeywords() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Temporary storage of collDBMoleculeDBKeywords to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBMoleculeDBKeywords() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBMoleculeDBKeywords to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBMoleculeHyperlinks() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBMoleculeHyperlinks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBMolecules() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBMolecules to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBRawFileDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Temporary storage of collDBRawFileDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBRawFileDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBRawFileDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBRawFiles() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Temporary storage of collDBRawFiles to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBReviewGroupDBUsers() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Temporary storage of collDBReviewGroupDBUsers to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBReviewGroupDBUsers() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBReviewGroupDBUsers to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSamples() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Temporary storage of collDBSamples to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSamples() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Temporary storage of collDBSamples to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSamples() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBSamples to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSamples() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBSamples to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBShifts() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Temporary storage of collDBShifts to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSignalDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Temporary storage of collDBSignalDBAtoms to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSignalDBAtoms() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Temporary storage of collDBSignalDBAtoms to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSignals() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBSignals to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrumDBConditions() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Temporary storage of collDBSpectrumDBConditions to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrumDBConditions() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBSpectrumDBConditions to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrumDBKeywords() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Temporary storage of collDBSpectrumDBKeywords to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrumDBKeywords() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBSpectrumDBKeywords to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrumDBLiteratures() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Temporary storage of collDBSpectrumDBLiteratures to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrumDBLiteratures() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBSpectrumDBLiteratures to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrumHyperlinks() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBSpectrumHyperlinks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Temporary storage of collDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBSpectrumTypes() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBSpectrumTypes to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBUserDBSpectrumEdits() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBUserDBSpectrumEdits to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBUserDBSpectrumEdits() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBUserDBSpectrumEdits to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBUserDBSpectrumMarks() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBUserDBSpectrumMarks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBUserDBSpectrumMarks() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBUserDBSpectrumMarks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBUserDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Temporary storage of collDBUserDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBUserDBSpectrums() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBUserDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBWishlists() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Temporary storage of collDBWishlists to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBWishlists() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Temporary storage of collDBWishlists to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initDBWishlists() - Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: Temporary storage of collDBWishlists to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initIsAuthors() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Temporary storage of collIsAuthors to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initIsAuthors() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Temporary storage of collIsAuthors to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initIsEditors() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Temporary storage of collIsEditors to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initIsEditors() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Temporary storage of collIsEditors to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
initminusone(float[]) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils
initProps(ServletConfig) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
InitServlet - Class in org.openscience.nmrshiftdb
InitServlet() - Constructor for class org.openscience.nmrshiftdb.InitServlet
initSimilarity(List, boolean) - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Sets the similarity between this and another spectrum
INPUT - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
instance - Static variable in class org.openscience.nmrshiftdb.util.CaptchaServiceSingleton
instance - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
intensities - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
intensity - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: The value for the intensity field
INTENSITY - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: the column name for the INTENSITY field
intensity - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
ipiasdes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
ipicpsdes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
IS_AROMATIC - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the IS_AROMATIC field
IS_AROMATIC - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: the column name for the IS_AROMATIC field
IS_CONFIGURATION_SPECIFIED - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: the column name for the IS_CONFIGURATION_SPECIFIED field
IS_VISIBLE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the IS_VISIBLE field
isAlike(String, String) - Static method in class org.openscience.nmrshiftdb.util.lDistance: Gets the alike attribute of the lDistance class
isAromatic - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the isAromatic field
isAromatic - Variable in class org.openscience.nmrshiftdb.om.BaseDBBond: The value for the isAromatic field
isAssignedToAtom(Atom) - Method in class org.openscience.nmrshiftdb.util.ValueTriple: Convinience method which tells if a signal is assigned to a certain atom
isAssignedToNone(IAtom) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Tells if an atom is assigned to no signal
IsAuthor - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
IsAuthor() - Constructor for class org.openscience.nmrshiftdb.om.IsAuthor
IsAuthorMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
IsAuthorMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.IsAuthorMapBuilder
IsAuthorPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
IsAuthorPeer() - Constructor for class org.openscience.nmrshiftdb.om.IsAuthorPeer
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBArticleMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBAtomMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBAuthorMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBBondDBAtomMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBBondMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBBookDBPublisherMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBBookMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBBookmarkMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBCanonicalNameTypeMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBChemicalNameMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBConditionMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBConditionTypeMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet2dMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSet3dMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBCoordinateSetTypeMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBCouplingMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBGuestbookMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBIdentifierMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBIsotopeMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBJournalMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBJournalVolumeMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBKeywordMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBLabGroupMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBLiteratureMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBMachineMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeDBKeywordMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeHyperlinkMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBMoleculeMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBPublisherMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBRawFileDBSpectrumMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBRawFileMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBReviewGroupDBUserMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBReviewGroupMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSampleMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSessionsMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBShiftMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSignalDBAtomMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSignalMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBConditionMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBKeywordMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumDBLiteratureMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumHyperlinkMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBSpectrumTypeMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumEditMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBUserDBSpectrumMarkMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.DBWishlistMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.IsAuthorMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isBuilt() - Method in class org.openscience.nmrshiftdb.om.map.IsEditorMapBuilder: Tells us if this DatabaseMapBuilder is built so that we don't have to re-build it every time.
isCalculated() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the calculated attribute of the SubmittingData object
isChiral() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Tells if this molecule contains any valid chirality (i.
isChiralProv - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
isChoosen - Variable in class org.openscience.nmrshiftdb.om.DBKeyword: Used to rembemer if a Condition is choosen durig submit
isConfigurationSpecified - Variable in class org.openscience.nmrshiftdb.om.BaseDBBond: The value for the isConfigurationSpecified field
isCoordinate3d(int) - Method in class org.openscience.nmrshiftdb.om.DBAtom
isDeletable() - Method in class org.openscience.nmrshiftdb.om.DBSample
isDeletableWorker() - Method in class org.openscience.nmrshiftdb.om.DBSample
isDoubleBondSpecified - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
IsEditor - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
IsEditor() - Constructor for class org.openscience.nmrshiftdb.om.IsEditor
IsEditorMapBuilder - Class in org.openscience.nmrshiftdb.om.map: This class was autogenerated by Torque on: [Tue Nov 21 16:23:43 CET 2006]
IsEditorMapBuilder() - Constructor for class org.openscience.nmrshiftdb.om.map.IsEditorMapBuilder
IsEditorPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
IsEditorPeer() - Constructor for class org.openscience.nmrshiftdb.om.IsEditorPeer
isInRange - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
isIsDoubleBondSpecifiedNull() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Tells if the isDoubleBondSpecified attribute of the SubmittingData object is null (needed because velocity can't do a comparision to null)
isLabserver() - Method in class org.openscience.nmrshiftdb.util.UrlTool
isMeasured() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Gets the measured attribute of the SubmittingData object
isMonograph() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Tells if this a monograph or not.
isPublishedInJournal() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Tells if this literature item is published in a journal.
isShowpeakpicker() - Method in class org.openscience.nmrshiftdb.util.SubmittingData
isSignalWithShiftArray(DBSignal[], int, int, boolean) - Static method in class org.openscience.nmrshiftdb.util.SpectrumUtils: Determines if there is a signal in a certain range
isSimilarityNot0() - Method in class org.openscience.nmrshiftdb.om.DBSpectrum: Tells if the similarity of this spectrum is zero or not
issue - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's a journal article: The issue
ISSUE_NUMBER - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: the column name for the ISSUE_NUMBER field
issueNumber - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle: The value for the issueNumber field
isVisible - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the isVisible field
ita - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournal: The value for the ita field
ITA - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: the column name for the ITA field
ita - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's a journal article: The title abbreviation

J

JCAMP_STRICT - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.ChooseSpectrumTypeAction
JcampToCMLSpectrumMapper - Class in org.openscience.nmrshiftdb.util: Maps a JCamp spectrum to a CMLSpectrum
JcampToCMLSpectrumMapper() - Constructor for class org.openscience.nmrshiftdb.util.JcampToCMLSpectrumMapper
jetspeedprops - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
JOURNAL_ARTICLE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
JOURNAL_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: the column name for the JOURNAL_ID field
JOURNAL_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: the column name for the JOURNAL_ID field
JOURNAL_VOLUME_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: the column name for the JOURNAL_VOLUME_ID field
journalId - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournal: The value for the journalId field
journalId - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: The value for the journalId field
journalsubtitle - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's a journal article: The subtitle of the journal
journaltitle - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's a journal article: The title of the journal
journalVolumeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: The value for the journalVolumeId field

K

keepAssignmentEntries - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
keyword - Variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: The value for the keyword field
KEYWORD - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: the column name for the KEYWORD field
keyword - Variable in class org.openscience.nmrshiftdb.om.DBMoleculeDBKeyword
keyword - Variable in class org.openscience.nmrshiftdb.om.DBSpectrumDBKeyword
KEYWORD_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: the column name for the KEYWORD_ID field
KEYWORD_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: the column name for the KEYWORD_ID field
KEYWORD_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: the column name for the KEYWORD_ID field
KEYWORD_SOUNDEX - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: the column name for the KEYWORD_SOUNDEX field
keywordId - Variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: The value for the keywordId field
keywordId - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: The value for the keywordId field
keywordId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: The value for the keywordId field
KeywordPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet showing the screen for selecting keywords
KeywordPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.KeywordPortlet
keywordSoundex - Variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: The value for the keywordSoundex field
keywordsVector - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
keywordsVector - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum

L

LABGROUP_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: the column name for the LABGROUP_ID field
LABGROUP_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the column name for the LABGROUP_ID field
LABGROUP_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: the column name for the LABGROUP_NAME field
labgroupId - Variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: The value for the labgroupId field
labgroupId - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The value for the labgroupId field
labgroupName - Variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: The value for the labgroupName field
LASTACTION_KEY - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.SearchConditionAction
lastDBArticlesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: The criteria used to select the current contents of collDBArticles
lastDBArticlesRelatedByLiteratureIdCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The criteria used to select the current contents of collDBArticlesRelatedByLiteratureId
lastDBArticlesRelatedByPublishedInBookCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The criteria used to select the current contents of collDBArticlesRelatedByPublishedInBook
lastDBAtomsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBAtoms
lastDBBondDBAtomsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The criteria used to select the current contents of collDBBondDBAtoms
lastDBBondDBAtomsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBBond: The criteria used to select the current contents of collDBBondDBAtoms
lastDBBookDBPublishersCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The criteria used to select the current contents of collDBBookDBPublishers
lastDBBookDBPublishersCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBPublisher: The criteria used to select the current contents of collDBBookDBPublishers
lastDBBookmarksCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBBookmarks
lastDBBookmarksCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBBookmarks
lastDBBooksCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The criteria used to select the current contents of collDBBooks
lastDBCanonicalNamesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: The criteria used to select the current contents of collDBCanonicalNames
lastDBCanonicalNamesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBCanonicalNames
lastDBChemicalNamesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBChemicalNames
lastDBConditionsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The criteria used to select the current contents of collDBConditions
lastDBConditionsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBConditions
lastDBCoordinateSet2dsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The criteria used to select the current contents of collDBCoordinateSet2ds
lastDBCoordinateSet2dsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: The criteria used to select the current contents of collDBCoordinateSet2ds
lastDBCoordinateSet3dsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The criteria used to select the current contents of collDBCoordinateSet3ds
lastDBCoordinateSet3dsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: The criteria used to select the current contents of collDBCoordinateSet3ds
lastDBCouplingsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBCouplings
lastDBCouplingsRelatedByAtomId1Criteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The criteria used to select the current contents of collDBCouplingsRelatedByAtomId1
lastDBCouplingsRelatedByAtomId2Criteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The criteria used to select the current contents of collDBCouplingsRelatedByAtomId2
lastDBGuestbooksCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBGuestbooks
lastDBIdentifiersCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The criteria used to select the current contents of collDBIdentifiers
lastDBIdentifiersCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The criteria used to select the current contents of collDBIdentifiers
lastDBIsotopesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: The criteria used to select the current contents of collDBIsotopes
lastDBJournalVolumesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournal: The criteria used to select the current contents of collDBJournalVolumes
lastDBLabGroupsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBLabGroups
lastDBMachinesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: The criteria used to select the current contents of collDBMachines
lastDBMachinesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: The criteria used to select the current contents of collDBMachines
lastDBMoleculeDBKeywordsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: The criteria used to select the current contents of collDBMoleculeDBKeywords
lastDBMoleculeDBKeywordsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBMoleculeDBKeywords
lastDBMoleculeHyperlinksCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBMoleculeHyperlinks
lastDBMoleculesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBMolecules
lastDBRawFileDBSpectrumsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile: The criteria used to select the current contents of collDBRawFileDBSpectrums
lastDBRawFileDBSpectrumsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBRawFileDBSpectrums
lastDBRawFilesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The criteria used to select the current contents of collDBRawFiles
lastDBReviewGroupDBUsersCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: The criteria used to select the current contents of collDBReviewGroupDBUsers
lastDBReviewGroupDBUsersCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBReviewGroupDBUsers
lastDBSamplesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: The criteria used to select the current contents of collDBSamples
lastDBSamplesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The criteria used to select the current contents of collDBSamples
lastDBSamplesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBSamples
lastDBSamplesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBSamples
lastDBShiftsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: The criteria used to select the current contents of collDBShifts
lastDBSignalDBAtomsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The criteria used to select the current contents of collDBSignalDBAtoms
lastDBSignalDBAtomsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: The criteria used to select the current contents of collDBSignalDBAtoms
lastDBSignalsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBSignals
lastDBSpectrumDBConditionsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: The criteria used to select the current contents of collDBSpectrumDBConditions
lastDBSpectrumDBConditionsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBSpectrumDBConditions
lastDBSpectrumDBKeywordsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: The criteria used to select the current contents of collDBSpectrumDBKeywords
lastDBSpectrumDBKeywordsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBSpectrumDBKeywords
lastDBSpectrumDBLiteraturesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The criteria used to select the current contents of collDBSpectrumDBLiteratures
lastDBSpectrumDBLiteraturesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBSpectrumDBLiteratures
lastDBSpectrumHyperlinksCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBSpectrumHyperlinks
lastDBSpectrumsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBSpectrums
lastDBSpectrumsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: The criteria used to select the current contents of collDBSpectrums
lastDBSpectrumsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBSpectrums
lastDBSpectrumTypesCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBSpectrumTypes
lastDBUserDBSpectrumEditsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBUserDBSpectrumEdits
lastDBUserDBSpectrumEditsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBUserDBSpectrumEdits
lastDBUserDBSpectrumMarksCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBUserDBSpectrumMarks
lastDBUserDBSpectrumMarksCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBUserDBSpectrumMarks
lastDBUserDBSpectrumsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The criteria used to select the current contents of collDBUserDBSpectrums
lastDBUserDBSpectrumsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBUserDBSpectrums
lastDBWishlistsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The criteria used to select the current contents of collDBWishlists
lastDBWishlistsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: The criteria used to select the current contents of collDBWishlists
lastDBWishlistsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The criteria used to select the current contents of collDBWishlists
lastIsAuthorsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: The criteria used to select the current contents of collIsAuthors
lastIsAuthorsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The criteria used to select the current contents of collIsAuthors
lastIsEditorsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: The criteria used to select the current contents of collIsEditors
lastIsEditorsCriteria - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The criteria used to select the current contents of collIsEditors
lDistance - Class in org.openscience.nmrshiftdb.util: This class calculate the distance of two String.
lDistance() - Constructor for class org.openscience.nmrshiftdb.util.lDistance
leader - Variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: The value for the leader field
LEADER - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: the column name for the LEADER field
level - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
literature - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the literature field
LITERATURE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the LITERATURE field
literature - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
LITERATURE_AUTHOR - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
LITERATURE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: the column name for the LITERATURE_ID field
LITERATURE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: the column name for the LITERATURE_ID field
LITERATURE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: the column name for the LITERATURE_ID field
LITERATURE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: the column name for the LITERATURE_ID field
LITERATURE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: the column name for the LITERATURE_ID field
LITERATURE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: the column name for the LITERATURE_ID field
LITERATURE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: the column name for the LITERATURE_ID field
LITERATURE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: the column name for the LITERATURE_ID field
LITERATURE_SOUNDEX - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the LITERATURE_SOUNDEX field
LITERATURE_TITLE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
literatureAlreadyExists(Connection) - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Looks if a literature item alreay exists in db.
literaturecomplete - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
literatureForIdentifiers - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
literatureId - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle: The value for the literatureId field
literatureId - Variable in class org.openscience.nmrshiftdb.om.BaseDBBook: The value for the literatureId field
literatureId - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: The value for the literatureId field
literatureId - Variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: The value for the literatureId field
literatureId - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The value for the literatureId field
literatureId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: The value for the literatureId field
literatureId - Variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor: The value for the literatureId field
literatureId - Variable in class org.openscience.nmrshiftdb.om.BaseIsEditor: The value for the literatureId field
literatureOld - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
literaturesNew - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
literatureSoundex - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the literatureSoundex field
LoadBalancerDaemon - Class in org.openscience.nmrshiftdb.daemons: A daemon that looks for the NMRShiftDB server with the lowest load and writes this to DB
LoadBalancerDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.LoadBalancerDaemon
logError(Throwable, String, RunData, boolean) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Logs an error
logToSql(String, RunData) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Logs something to the sql log file
lower - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
lowerPeakLimit - Variable in class org.openscience.nmrshiftdb.util.PeakPicker
LOWEST_LOAD_SERVER - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: the column name for the LOWEST_LOAD_SERVER field
lowestLoadServer - Variable in class org.openscience.nmrshiftdb.om.BaseDBSessions: The value for the lowestLoadServer field

M

machine - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the machine field
MACHINE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the MACHINE field
MACHINE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the column name for the MACHINE_ID field
machineId - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The value for the machineId field
main(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: The main program for the AdminPanel class.
main(String[]) - Static method in class org.openscience.nmrshiftdb.PredictionTool: The main program for the PredictionTool class.
main(String[]) - Static method in class org.openscience.nmrshiftdb.util.G98Shifts: Main method.
makeArff(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel
makeBars(double[], int) - Method in class org.openscience.nmrshiftdb.util.PeakPicker
makeDoubleBondSet(IMolecule, List, boolean[]) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Produces a list of double bonds in a molecule.
makeFingerprint(DBSignal[], boolean) - Static method in class org.openscience.nmrshiftdb.util.SpectrumUtils: Makes a spectrum fingerprint
makeFingerprint(DBSpectrum) - Static method in class org.openscience.nmrshiftdb.util.SpectrumUtils: Makes a fingerprint of a spectrum
makeJpg(String, String, ServletConfig, int, int, boolean) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Makes a jpeg out of a mol file.
makeNewOrGetExisting(int, String, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.DBConditionPeer
makeQA(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel
makeReviewScreen(String, RunData) - Method in class org.openscience.nmrshiftdb.portlets.ReviewPortlet: Puts together the review screen
makeSimpleSpecfile(String, boolean) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Removes atom numbers from a specfile string.
makeZip(String[]) - Method in class org.openscience.nmrshiftdb.util.Export: Makes a zip file out of several files
many(Object) - Method in class org.openscience.nmrshiftdb.util.OneToManyTable
mapContData(Spectrum1D) - Static method in class org.openscience.nmrshiftdb.util.JcampToCMLSpectrumMapper: Maps continuous data
mapJcampToCMLSpectrum(Spectrum, RunData) - Static method in class org.openscience.nmrshiftdb.util.JcampToCMLSpectrumMapper: Main method, responsible for calling the mapping methods and setting general settings
mapNotes(Spectrum, CMLSpectrum, RunData) - Static method in class org.openscience.nmrshiftdb.util.JcampToCMLSpectrumMapper: Map the notes/metadata
mapPeaks(Spectrum1D) - Static method in class org.openscience.nmrshiftdb.util.JcampToCMLSpectrumMapper: Maps the peak list
mapsmap - Static variable in class org.openscience.nmrshiftdb.PredictionTool
mark - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: The value for the mark field
MARK - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: the column name for the MARK field
MARK_DATE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: the column name for the MARK_DATE field
markDate - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: The value for the markDate field
matchPathLists(List, List) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: figure out a string representing the relative path of 'f' with respect to 'r'
max - Variable in class org.openscience.nmrshiftdb.PredictionTool.ValueBean
MAX_HITS_TO_DISPLAY - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils: Maximum number of hits to display
MAX_VALUE - Static variable in class org.openscience.nmrshiftdb.util.SpectrumUtils
MAXDEPTH - Variable in class org.openscience.nmrshiftdb.daemons.AssignRobotDaemon
maxparameters - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
maxsimilarity - Variable in class org.openscience.nmrshiftdb.om.DBMolecule: Description of the Field
mb3d - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
MEASURE_CHANGER - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the column name for the MEASURE_CHANGER field
MEASURE_OPERATOR - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the column name for the MEASURE_OPERATOR field
MEASURE_SELF - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the column name for the MEASURE_SELF field
measureChanger - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The value for the measureChanger field
MEASUREDONLY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
measuredOrCalculated - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
MeasuredOrNotPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet showing the choice of measured or calculated spectra.
MeasuredOrNotPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.MeasuredOrNotPortlet
measurementConditions - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
measureOperator - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The value for the measureOperator field
measureSelf - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The value for the measureSelf field
MESSAGES - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
METADATA - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
MID_CANT_DELETE_CURRENT - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
MID_DELETE_FAILED - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
MID_ENTITY_ALREADY_EXISTS - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
MID_INVALID_ENTITY_NAME - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
MID_MISSING_PARAMETER - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
MID_UPDATE_FAILED - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
min - Variable in class org.openscience.nmrshiftdb.PredictionTool.ValueBean
model - Static variable in class org.openscience.nmrshiftdb.portlets.PredictPortlet
molcoord - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
MOLECULAR_WEIGHT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the MOLECULAR_WEIGHT field
molecularWeight - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the molecularWeight field
molecule - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset: A molecule as it was read from the gaussian file.
molecule - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the MOLECULE_ID field
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: the column name for the MOLECULE_ID field
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: the column name for the MOLECULE_ID field
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: the column name for the MOLECULE_ID field
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: the column name for the MOLECULE_ID field
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: the column name for the MOLECULE_ID field
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the MOLECULE_ID field
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the MOLECULE_ID field
MOLECULE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: the column name for the MOLECULE_ID field
MOLECULE_NR - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the moleculeId field
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark: The value for the moleculeId field
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: The value for the moleculeId field
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: The value for the moleculeId field
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the moleculeId field
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: The value for the moleculeId field
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: The value for the moleculeId field
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the moleculeId field
moleculeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist: The value for the moleculeId field
moleculeKeywords - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
MOLECULEKEYWORDS_FRAGMENT - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
MOLECULEKEYWORDS_TOTAL - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
moleculeLinks - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
MOLECULES_PER_PAGE - Variable in class org.openscience.nmrshiftdb.portlets.ResultPortlet
moleculeWith3d - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
MOLFILE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
MOLFILEH - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
MOLKEY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
MOLLINK - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
molWithH - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
molWithHCount - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
MONOGRAPH - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
multiplicity - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: The value for the multiplicity field
MULTIPLICITY - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: the column name for the MULTIPLICITY field
MULTIPLICITY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
multiplicity - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
multiplicity - Variable in class org.openscience.nmrshiftdb.util.ValueTriple: The multplicity of this signal.
multiplicityString - Variable in class org.openscience.nmrshiftdb.util.ValueTriple
multiplyBy(double, double[]) - Method in class org.openscience.nmrshiftdb.util.PeakPicker: array multiplication by a scalar.
multis - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
myBoolean - Variable in class org.openscience.nmrshiftdb.util.StringAndIntAndBoolean
MyHomePortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling the restore of the backup
MyHomePortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.MyHomePortlet
myInt - Variable in class org.openscience.nmrshiftdb.util.StringAndInt: The int to hold
MYSPECTRA - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
myString - Variable in class org.openscience.nmrshiftdb.util.StringAndInt: The string to hold

N

name - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: The value for the name field
NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: the column name for the NAME field
name - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: The value for the name field
NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: the column name for the NAME field
name - Variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: The value for the name field
NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: the column name for the NAME field
name - Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The value for the name field
NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: the column name for the NAME field
name - Variable in class org.openscience.nmrshiftdb.om.BaseDBPublisher: The value for the name field
NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: the column name for the NAME field
name - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: The value for the name field
NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: the column name for the NAME field
NAME_SOUNDEX - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: the column name for the NAME_SOUNDEX field
NAME_SOUNDEX - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: the column name for the NAME_SOUNDEX field
NAME_TOTAL - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: the column name for the NAME_TOTAL field
NAME_TOTAL_SOUNDEX - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: the column name for the NAME_TOTAL_SOUNDEX field
nameForElements - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
nameSoundex - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: The value for the nameSoundex field
nameSoundex - Variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: The value for the nameSoundex field
namespaceThemAll(Elements) - Method in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
nameTotal - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: The value for the nameTotal field
nameTotalSoundex - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: The value for the nameTotalSoundex field
newAtomNumbersMap - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
nmrAlgorithm - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset
nmrBasisSet - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset: Four fields that describe the way in which the geometry optimization of the molecule and in which the subsequent nmr computation was were performed.
nmrid - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
nmrMethod - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset: Four fields that describe the way in which the geometry optimization of the molecule and in which the subsequent nmr computation was were performed.
nmrprops - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils: Description of the Field
NMRShiftDB - Interface in org.openscience.nmrshiftdb.webservices
NmrshiftdbConstants - Class in org.openscience.nmrshiftdb.util
NmrshiftdbConstants() - Constructor for class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
NmrshiftdbException - Exception in org.openscience.nmrshiftdb.util.exception
NmrshiftdbException(String) - Constructor for exception org.openscience.nmrshiftdb.util.exception.NmrshiftdbException
nmrshiftdbLogger - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
NMRShiftDBServiceBindingImpl - Class in org.openscience.nmrshiftdb.webservices
NMRShiftDBServiceBindingImpl() - Constructor for class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
NMRShiftDBServicesTest - Class in org.openscience.nmrshiftdb.tests
NMRShiftDBServicesTest(String) - Constructor for class org.openscience.nmrshiftdb.tests.NMRShiftDBServicesTest
NmrshiftdbServlet - Class in org.openscience.nmrshiftdb: A servlet handling nmrshiftdb tasks outside of the jetspeed screen.
NmrshiftdbServlet() - Constructor for class org.openscience.nmrshiftdb.NmrshiftdbServlet
NmrshiftdbUser - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
NmrshiftdbUser() - Constructor for class org.openscience.nmrshiftdb.om.NmrshiftdbUser
NmrshiftdbUserPeer - Class in org.openscience.nmrshiftdb.om: You should add additional methods to this class to meet the application requirements.
NmrshiftdbUserPeer() - Constructor for class org.openscience.nmrshiftdb.om.NmrshiftdbUserPeer
nmrStandard - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset
norenumber - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
noreview - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
normalize(IAtomContainer, String) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Exuecutes cdk normalizer with given xml file
normalizerdoc - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
notYetAnyAssignments() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Indicates that no assignemnts were done
nucleus - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
numberOfCalculatedSpectra - Variable in class org.openscience.nmrshiftdb.util.DatabaseStatistics
numberOfMeasuredSpectra - Variable in class org.openscience.nmrshiftdb.util.DatabaseStatistics
numberOfSpectra - Variable in class org.openscience.nmrshiftdb.util.DatabaseStatistics
numberOfStructures - Variable in class org.openscience.nmrshiftdb.util.DatabaseStatistics
numberOfUsers - Variable in class org.openscience.nmrshiftdb.util.DatabaseStatistics
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: number of columns for this peer
numColumns - Static variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: number of columns for this peer

O

oldmol - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
ones() - Method in class org.openscience.nmrshiftdb.util.OneToManyTable
OneToManyTable<S,T> - Class in org.openscience.nmrshiftdb.util
OneToManyTable() - Constructor for class org.openscience.nmrshiftdb.util.OneToManyTable
optBasisSet - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset: Four fields that describe the way in which the geometry optimization of the molecule and in which the subsequent nmr computation was were performed.
options - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
optMethod - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset: Four fields that describe the way in which the geometry optimization of the molecule and in which the subsequent nmr computation was were performed.
ORDER_NUMBER - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: the column name for the ORDER_NUMBER field
OrderAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets: Handles actions for the GuestbookPortlet
OrderAction() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
OrderFullfillAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets: Handles actions for the GuestbookPortlet
OrderFullfillAction() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction
OrderFullfillAction.LocalComparator - Class in org.openscience.nmrshiftdb.modules.actions.portlets
OrderFullfillAction.LocalComparator() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.OrderFullfillAction.LocalComparator
orderNumber - Variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: The value for the orderNumber field
org.openscience.nmrshiftdb - package org.openscience.nmrshiftdb
org.openscience.nmrshiftdb.daemons - package org.openscience.nmrshiftdb.daemons: Daeomons for NMRShiftDB.
org.openscience.nmrshiftdb.modules.actions - package org.openscience.nmrshiftdb.modules.actions: Action handlers for NMRShiftDB.
org.openscience.nmrshiftdb.modules.actions.portlets - package org.openscience.nmrshiftdb.modules.actions.portlets
org.openscience.nmrshiftdb.modules.actions.portlets.security - package org.openscience.nmrshiftdb.modules.actions.portlets.security
org.openscience.nmrshiftdb.om - package org.openscience.nmrshiftdb.om: Torque's OM-Layer for NMRShiftDB.
org.openscience.nmrshiftdb.om.map - package org.openscience.nmrshiftdb.om.map
org.openscience.nmrshiftdb.portlets - package org.openscience.nmrshiftdb.portlets: Classes implementing org.apache.jetspeed.portal.Portlet and registered in local-portlets.xreg.
org.openscience.nmrshiftdb.tests - package org.openscience.nmrshiftdb.tests: Test classes
org.openscience.nmrshiftdb.util - package org.openscience.nmrshiftdb.util: Utility classes for NMRShiftDB
org.openscience.nmrshiftdb.util.exception - package org.openscience.nmrshiftdb.util.exception
org.openscience.nmrshiftdb.webservices - package org.openscience.nmrshiftdb.webservices: Web services.
OTHER_ARTICLE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
OTHER_NUCLEI - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the OTHER_NUCLEI field
OTHER_WISHED_SPECTRUM - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the OTHER_WISHED_SPECTRUM field
otherNuclei - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the otherNuclei field
otherspectrastringsize - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
otherWishedSpectrum - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the otherWishedSpectrum field

P

pageCached - Variable in class org.openscience.nmrshiftdb.portlets.WebPagePortletWithURLFromRequest
PAGES_FROM - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: the column name for the PAGES_FROM field
PAGES_PER_BROWSE_LINE - Variable in class org.openscience.nmrshiftdb.portlets.ResultPortlet
PAGES_TO - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: the column name for the PAGES_TO field
pagesFrom - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle: The value for the pagesFrom field
pagesTo - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle: The value for the pagesTo field
PANEID_GROUP_BROWSER - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_GROUP_UPDATE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_PERMISSION_BROWSER - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_PERMISSION_UPDATE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_ROLE_BROWSER - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_ROLE_UPDATE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_ROLEPERMISSION_UPDATE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_USER_BROWSER - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_USER_UPDATE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PANEID_USERROLE_UPDATE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PARAM_ENTITY_ID - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PARAM_MODE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PARAM_MODE_DELETE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PARAM_MODE_INSERT - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PARAM_MODE_UPDATE - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PARAM_MSG - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PARAM_MSGID - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
PARAM_USERNAME - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
parseJcamp(SubmittingData, String, RunData, String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Parses a jcmap file to a submittingData object.
parselog - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset: A log file containing information about the parsing process For debugging use only.
parseSpectrum(DBSpectrum) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
parseSpectrum(String) - Static method in class org.openscience.nmrshiftdb.util.ParseUtils: Returns an ArrayList of ValueTriples out of an input string like 3,4\n5;6...
parseSpectrumFromSpecFile(String) - Static method in class org.openscience.nmrshiftdb.util.ParseUtils: Returns an ArrayList of ValueTriples out of an input string like 3,4,1|5,6,2|..., as found in the specfile attribute of Spectrum in the database
ParseUtils - Class in org.openscience.nmrshiftdb.util: This class contains utitilies for parsing input strings
ParseUtils() - Constructor for class org.openscience.nmrshiftdb.util.ParseUtils
path - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
PeakPicker - Class in org.openscience.nmrshiftdb.util
PeakPicker(CMLSpectrumData) - Constructor for class org.openscience.nmrshiftdb.util.PeakPicker
pedes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticle: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBond: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBook: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCondition: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournal: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeyword: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachine: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisher: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessions: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBShift: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditor: The Peer class
peer - Static variable in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser: The Peer class
picondes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
pictures - Variable in class org.openscience.nmrshiftdb.util.Export: This are the image files used for making pdf
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalName
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifier
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBShift
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
pks - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist
pks - Variable in class org.openscience.nmrshiftdb.om.BaseIsAuthor
pks - Variable in class org.openscience.nmrshiftdb.om.BaseIsEditor
place - Variable in class org.openscience.nmrshiftdb.om.BaseDBPublisher: The value for the place field
PLACE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: the column name for the PLACE field
place - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's a book: The publishing place
populateObject(Record, int, DBArticle) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBBondDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBBond) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBBookDBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBBookmark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBBook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBCanonicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBCanonicalNameType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBChemicalName) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBConditionType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBCoordinateSet2d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBCoordinateSet3d) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBCoordinateSetType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBCoupling) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBGuestbook) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBIdentifier) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBIsotope) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBJournal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBJournalVolume) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBLabGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBMachine) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBMoleculeDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBMoleculeHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBMolecule) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBPublisher) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBRawFileDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBRawFile) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBReviewGroupDBUser) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBReviewGroup) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSample) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSessions) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBShift) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSignalDBAtom) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSignal) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSpectrumDBCondition) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSpectrumDBKeyword) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSpectrumDBLiterature) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSpectrumHyperlink) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBSpectrumType) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBUserDBSpectrumEdit) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBUserDBSpectrumMark) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBUserDBSpectrum) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, DBWishlist) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, IsAuthor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Populates an object from a resultset row starting from a specified offset.
populateObject(Record, int, IsEditor) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Populates an object from a resultset row starting from a specified offset.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: The returned List will contain objects of the default type or objects that inherit from the default.
populateObjects(List) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer
possibleAtomNumbers - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
POTMULTIPLICITY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
ppichargedes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
predict - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
predict(IMolecule, IAtom) - Method in class org.openscience.nmrshiftdb.PredictionTool: Does a prediction.
predictedvaluesfloat - Static variable in class org.openscience.nmrshiftdb.daemons.ReviewDaemon
PredictionTool - Class in org.openscience.nmrshiftdb: This class offers a stand-alone prediction based on HOSE codes from NMRShiftDB.
PredictionTool() - Constructor for class org.openscience.nmrshiftdb.PredictionTool: Constructor for the PredictionTool object
PredictionTool.ValueBean - Class in org.openscience.nmrshiftdb
PredictionTool.ValueBean(float, float, float) - Constructor for class org.openscience.nmrshiftdb.PredictionTool.ValueBean
predictPage(StringBuffer, RunData, HttpSession) - Method in class org.openscience.nmrshiftdb.portlets.PredictPortlet: Puts together the prediction page
PredictPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling predictions spectra/molecules...
PredictPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.PredictPortlet
predictRange(IMolecule, IAtom, boolean, boolean, int, StringBuffer, boolean, boolean, RunData, Map, int, boolean, StringBuffer, boolean) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: This method predicts the range and the shift of a C atom from the database.
PROBABLE_STRUCTURE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the PROBABLE_STRUCTURE field
probableStructure - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the probableStructure field
process - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the process field
PROCESS - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the PROCESS field
processBrowse(Context, RunData, DBSample) - Static method in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
processChemFile(IChemFile, StringBuffer, RunData, String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Tries to read a chemfile via cdk to a cdk molecule, which is set to the session with attributename as key.
processChemFile(IChemFile) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
processChemModel(IChemModel, StringBuffer, RunData, String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Tries to read a chemmodel via cdk to a cdk molecule, which is set to the session with attributename as key.
processChemModel(IChemModel) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
processData(Map, String[], Properties, NmrshiftdbUser, Properties, Properties) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Inserts a dkfz set into the db
processFileItem(FileItem, StringBuffer, RunData, String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Tries to read a FileItem via cdk to a cdk molecule, which is set to the session with attributename as key.
psigmachargedes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
ptpdes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
PUBLISHED_IN_BOOK - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: the column name for the PUBLISHED_IN_BOOK field
PUBLISHED_IN_JOURNAL - Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: the column name for the PUBLISHED_IN_JOURNAL field
publishedInBook - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle: The value for the publishedInBook field
publishedInJournal - Variable in class org.openscience.nmrshiftdb.om.BaseDBArticle: The value for the publishedInJournal field
publisher - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's a book: The publisher name
PUBLISHER_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: the column name for the PUBLISHER_ID field
PUBLISHER_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: the column name for the PUBLISHER_ID field
publisherId - Variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: The value for the publisherId field
publisherId - Variable in class org.openscience.nmrshiftdb.om.BaseDBPublisher: The value for the publisherId field
put(S, T) - Method in class org.openscience.nmrshiftdb.util.OneToManyTable

R

range - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
RAW_FILE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: the column name for the RAW_FILE_ID field
RAW_FILE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: the column name for the RAW_FILE_ID field
rawfile - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
rawfiledir - Variable in class org.openscience.nmrshiftdb.daemons.AssignRobotDaemon
rawFileId - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile: The value for the rawFileId field
rawFileId - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: The value for the rawFileId field
rdfg3r - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
rdfgdr - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
rdfghr - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
rdfghrtopol - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
rdfgsr - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
read() - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Reads the attributes from db.
readcasfromnci(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Reads cas numbers from nci file
readcoumarines(String[]) - Static method in class org.openscience.nmrshiftdb.AdminPanel: Reads coumarine files
readG9x(File, String[]) - Method in class org.openscience.nmrshiftdb.util.G98Shifts: Description of the Method
readToMol(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
rearangeAtoms(IMolecule) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: Sorts atoms like Cs-other heavy atoms-Hs.
reassignmentperiod - Variable in class org.openscience.nmrshiftdb.portlets.CheckAssignmentsPortlet
reassignmentvalueshow - Variable in class org.openscience.nmrshiftdb.portlets.CheckAssignmentsPortlet
refresh() - Method in class org.openscience.nmrshiftdb.util.UrlTool: Refresh from ApplicationTool interface.
REGEXP - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
REJECTED - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
RememberPassword - Class in org.openscience.nmrshiftdb.modules.actions: This action sets a new password for a user and sends it by email.
RememberPassword() - Constructor for class org.openscience.nmrshiftdb.modules.actions.RememberPassword
remove(S) - Method in class org.openscience.nmrshiftdb.util.OneToManyTable
removeDuplicates(List) - Static method in class org.openscience.nmrshiftdb.util.ParseUtils: Removes duplicate entries from an ArrayList of ValueTriples
removeLastComma(StringBuffer) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Removes the last character from a string buffer if it is a , or ;.
replace(String, String, String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Replaces a string in a string with another string
replaceNumbersByAtoms(boolean) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Replaces numbers in signalstable by atoms (this is needed after using ParseUtils.parseSpectrumFromSpecFile).
required - Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType: The value for the required field
REQUIRED - Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: the column name for the REQUIRED field
resolveNameFromPubchem(String) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Converts any sort of name into an InChI using Pubchem.
RestoreSavedSubmittingDataPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling the restore of failed submits
RestoreSavedSubmittingDataPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.RestoreSavedSubmittingDataPortlet
result - Variable in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
ResultPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling searches
ResultPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.ResultPortlet
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Get the list of objects for a ResultSet.
resultSet2Objects(ResultSet) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Get the list of objects for a ResultSet.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Retrieve a single object by pk
retrieveByPK(int, String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: retrieve object using using pk values.
retrieveByPK(int, String, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Retrieve a single object by pk
retrieveByPK(int, int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: retrieve object using using pk values.
retrieveByPK(int, int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Retrieve a single object by pk
retrieveByPK(int, String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: retrieve object using using pk values.
retrieveByPK(int, String, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Retrieve a single object by pk
retrieveByPK(int, String) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: retrieve object using using pk values.
retrieveByPK(int, String, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: retrieve object using using pk values.
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Retrieve a single object by pk
retrieveByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Retrieve a single object by pk
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Retrieve a single object by pk
retrieveByPK(int, int, int, Date) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: retrieve object using using pk values.
retrieveByPK(int, int, int, Date, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Retrieve a single object by pk
retrieveByPK(int, int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: retrieve object using using pk values.
retrieveByPK(int, int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Retrieve a single object by pk
retrieveByPK(int, int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: retrieve object using using pk values.
retrieveByPK(int, int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: retrieve object using using pk values.
retrieveByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Retrieve a single object by pk
retrieveByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Retrieve a single object by pk
retrieveByPK(int, int) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: retrieve object using using pk values.
retrieveByPK(int, int, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: retrieve object using using pk values.
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Retrieve a multiple objects by pk
retrieveByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Retrieve a multiple objects by pk
retrieveByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Retrieve a multiple objects by pk
retrieveNmrshiftdbUserByPK(int) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: Retrieve a single object by pk
retrieveNmrshiftdbUserByPK(ObjectKey) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: Retrieve a single object by pk
retrieveNmrshiftdbUserByPK(ObjectKey, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: Retrieve a single object by pk
retrieveNmrshiftdbUserByPKs(List) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: Retrieve a multiple objects by pk
retrieveNmrshiftdbUserByPKs(List, Connection) - Static method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUserPeer: Retrieve a multiple objects by pk
review(RunData, String, int) - Method in class org.openscience.nmrshiftdb.portlets.ReviewPortlet: Reviews a spectrum
REVIEW_DATE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: the column name for the REVIEW_DATE field
REVIEW_FLAG - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the REVIEW_FLAG field
REVIEW_KEY - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the REVIEW_KEY field
ReviewDaemon - Class in org.openscience.nmrshiftdb.daemons: A daemon that deletes all spectra which have been rejected and are older than two months.
ReviewDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.ReviewDaemon
reviewDate - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: The value for the reviewDate field
reviewFlag - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the reviewFlag field
reviewFlag - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
REVIEWGROUP_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: the column name for the REVIEWGROUP_ID field
REVIEWGROUP_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: the column name for the REVIEWGROUP_ID field
REVIEWGROUP_NAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: the column name for the REVIEWGROUP_NAME field
reviewgroupId - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: The value for the reviewgroupId field
reviewgroupId - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: The value for the reviewgroupId field
reviewgroupName - Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: The value for the reviewgroupName field
ReviewGroupsBrowserAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets.security: This action sets up the template context for browsing of reviewgroups in the Turbine database.
ReviewGroupsBrowserAction() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsBrowserAction
ReviewGroupsUpdateAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets.security: This action sets up the template context for editing review groups in the Turbine database.
ReviewGroupsUpdateAction() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsUpdateAction
reviewKey - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the reviewKey field
ReviewPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handling reviewing spectra/molecules...
ReviewPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.ReviewPortlet
reviews - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
rewriter - Variable in class org.openscience.nmrshiftdb.portlets.WebPagePortletWithURLFromRequest
ringSet - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
ROBOT - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
role - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBBookPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer: Create a new object of type cls from a resultset row starting from a specified offset.
row2Object(Record, int, Class) - Static method in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer: Create a new object of type cls from a resultset row starting from a specified offset.
rownumber - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
rowstext - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
run() - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon: Does the task
run() - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemonWithoutServletConfig: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemonWithoutServletConfig: Does nothing
run() - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemonWithServletConfig: Does nothig
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemonWithServletConfig: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.AssignRobotDaemon
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.BuildHomeDaemon: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.BuildHoseCodeTableDaemon: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.BuildSdfDaemon: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.BuildSvmDaemon: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.DeleteOldMolfiles: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.LoadBalancerDaemon: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.ReviewDaemon: Does the task
run(ServletConfig) - Method in class org.openscience.nmrshiftdb.daemons.SaveSubmitsDaemon: Does the task
runData - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum: Description of the Field

S

SAMPLE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer: the column name for the SAMPLE_ID field
SAMPLE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the SAMPLE_ID field
sampleId - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile: The value for the sampleId field
sampleId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the sampleId field
sanitize(String) - Static method in class org.openscience.nmrshiftdb.util.JcampToCMLSpectrumMapper: Ensures the output has the pattern "[A-Za-z][A-Za-z0-9_\.\-]*".
sar - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the sar field
SAR - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the SAR field
saturate(IMolecule) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: saturates a molecule with (implicit) protons and bonds.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Stores the object in the database.
save() - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Stores the object in the database.
save(String) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.DBAtom: Saves this object incl.
save() - Method in class org.openscience.nmrshiftdb.om.DBBookmark: Stores the object in the database.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.DBChemicalName: Saves a chemical name, checking that the name does not yet exist.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.DBCondition
save(Connection) - Method in class org.openscience.nmrshiftdb.om.DBIdentifier: Saves this object in case there is not yet one.
save(int, Connection) - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Saves this literature object to the db.
save() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: A save which handles fingerprints via prepared statements, avoiding sql problems.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: A save which handles fingerprints via prepared statements, avoiding sql problems.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.DBMoleculeDBKeyword: Saves this keyword, using values set via the constructor, if any.
save(Connection) - Method in class org.openscience.nmrshiftdb.om.DBMoleculeHyperlink: Saves this to db.
save(ServletConfig) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Saves this data to the database
save(int, String, String, Date, ServletConfig, int, boolean) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Saves this data to the database
saveMolecule(IMolecule, IMolecule, Date, String, int, String, String, String, String, boolean, ServletConfig, int, Connection) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Saves a molecule + bonds + atoms to the database
saveMoleculeOnly(String, RunData, TurbineUser) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Saves a molecule to db (no values need to be set before, but molecule properties may be set).
saveSpectrum(Date, List, int, int, DBSpectrumType, String, List, List, IMolecule, String, String, ServletConfig, DBMolecule, Connection) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Saves a spectrum + signals + the rest to the database
saveSubdataToDisk(SubmittingData, RunData) - Method in class org.openscience.nmrshiftdb.portlets.SubmitPortlet: Saves the submitting data object to disk
SaveSubmitsDaemon - Class in org.openscience.nmrshiftdb.daemons: A daemon that builds a homepage to nmrshiftdbhtml.
SaveSubmitsDaemon() - Constructor for class org.openscience.nmrshiftdb.daemons.SaveSubmitsDaemon
SearchByNamePortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet showing the search by name form and filling it with the data from the previous submit
SearchByNamePortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.SearchByNamePortlet
SearchBySpectrumPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet showing the search by spectrum form and filling it with the data from the previous submit
SearchBySpectrumPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.SearchBySpectrumPortlet
SearchByStructurePortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet showing the search by structure form and filling it with the data from the previous submit
SearchByStructurePortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.SearchByStructurePortlet
SearchByWeightPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet showing the search by weight form and filling it with the data from the previous submit
SearchByWeightPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.SearchByWeightPortlet
SearchConditionAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets: Handles actions for the search by conditions portlet.
SearchConditionAction() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.SearchConditionAction
searchfiles(File, ArrayList<String>, HashMap<String, ZipOutputStream>, HashMap<String, StringBuffer>, File, ServletConfig, int) - Method in class org.openscience.nmrshiftdb.daemons.AssignRobotDaemon
SEARCHHISTORY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
SearchHistoryPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet showing the choice of measured or calculated spectra.
SearchHistoryPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.SearchHistoryPortlet
searchSignalMap - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
SecurityConstants - Class in org.openscience.nmrshiftdb.modules.actions.portlets.security: This class contains all the common constants used between data entry forms and browsers and actions
SecurityConstants() - Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.security.SecurityConstants
sedes - Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
selected - Variable in class org.openscience.nmrshiftdb.util.Export
selectNonHAtoms() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the non-H atoms of the DBMolecule
selectReviewer(TurbineUser) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Selects a reviewer
selectSpectra() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the DBSpectra associated with this DBMolecule (reviewed as true)
selectSpectra(int) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the DBSpectra associated with this DBMolecule (reviewed as true) except one given by editSpectrum.
selectSpectra(long) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the DBSpectra associated with this DBMolecule and matching a fingerprint
selectSpectraByUser(TurbineUser, boolean) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Gets the DBSpectra of a certain user associated with this DBMolecule (reviewed as true, false, rejected)
SELF - Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
sendEmailToEventReceivers(String, String, RunData, int) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils: Sends an email to all admineventreceiver role owners
sendEmailUserId - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
serializeMe() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Serializes itself to a String via JSX
serializeSubdata(SubmittingData, ServletConfig) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
serialVersionUID - Static variable in class org.openscience.nmrshiftdb.om.DBSpectrum
servcon - Variable in class org.openscience.nmrshiftdb.util.UrlTool
server - Variable in class org.openscience.nmrshiftdb.tests.NMRShiftDBServicesTest
server - Variable in class org.openscience.nmrshiftdb.tests.ServletTests
server - Variable in class org.openscience.nmrshiftdb.tests.UserServiceTest
ServletTests - Class in org.openscience.nmrshiftdb.tests: Description of the Class
ServletTests(String) - Constructor for class org.openscience.nmrshiftdb.tests.ServletTests
sessions - Variable in class org.openscience.nmrshiftdb.om.BaseDBSessions: The value for the sessions field
SESSIONS - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: the column name for the SESSIONS field
SESSIONS_ALL - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer: the column name for the SESSIONS_ALL field
sessionsAll - Variable in class org.openscience.nmrshiftdb.om.BaseDBSessions: The value for the sessionsAll field
setAssigned(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Set the value of Assigned
setAssignmentDate(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Set the value of AssignmentDate
setAtomicMass(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of AtomicMass
setAtomicMass(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Set the value of AtomicMass
setAtomId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of AtomId
setAtomId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Set the value of AtomId
setAtomId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Set the value of AtomId
setAtomId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Set the value of AtomId
setAtomId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Set the value of AtomId
setAtomId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Set the value of AtomId
setAtomId1(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Set the value of AtomId1
setAtomId2(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Set the value of AtomId2
setAttachment(byte[]) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of Attachment
setAttachmentName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of AttachmentName
setAuthor(String) - Method in class org.openscience.nmrshiftdb.om.DBLiterature
setAuthorbook(String) - Method in class org.openscience.nmrshiftdb.om.DBLiterature
setAuthorId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Set the value of AuthorId
setAuthorId(int) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Set the value of AuthorId
setAuthorId(int) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Set the value of AuthorId
setAuthorOrder(int) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Set the value of AuthorOrder
setAutonomeName(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the autonomeName attribute of the SubmittingData object
setAxis(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Set the value of Axis
setAxis(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Set the value of Axis
setBondId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Set the value of BondId
setBondId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Set the value of BondId
setCalculated() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the calculated attribute of the SubmittingData object
setCanonicalNameType(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Set the value of CanonicalNameType
setCanonicalNameTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Set the value of CanonicalNameTypeId
setCanonicalNameTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Set the value of CanonicalNameTypeId
setCasNumber(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of CasNumber
setCasNumber(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the casNumber attribute of the SubmittingData object
setChemName(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the chemName attribute of the SubmittingData object
setChoosen(boolean) - Method in class org.openscience.nmrshiftdb.om.DBSpectrumType
setChoosenSpectrumType(DBSpectrumType) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the choosenSpectrumType attribute of the SubmittingData object
setCmlEntryType(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the value of CmlEntryType
setComment(byte[]) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Comment
setComment(byte[]) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of Comment
setComment(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Set the value of Comment
setComment(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the comment attribute of the SubmittingData object
setCommentSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of CommentSoundex
setCompact(boolean) - Method in class org.openscience.nmrshiftdb.util.Export
setConditionId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Set the value of ConditionId
setConditionId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Set the value of ConditionId
setConditionName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the value of ConditionName
setConditions(ArrayList<DBConditionType>) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the conditions attribute of the SubmittingData object, needs to be a ArrayList of DBConditonType objects
setConditionType(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the value of ConditionType
setConditionTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Set the value of ConditionTypeId
setConditionTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the value of ConditionTypeId
setConstant(double) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Set the value of Constant
setContainedFiles(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Set the value of ContainedFiles
setCoordinateSetTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Set the value of CoordinateSetTypeId
setCoordinateSetTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Set the value of CoordinateSetTypeId
setCoordinateSetTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Set the value of CoordinateSetTypeId
setCouplings(ArrayList) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the couplings attribute of the ValuesForVelocityBean object
setCurrentSelectedCondition(DBCondition) - Method in class org.openscience.nmrshiftdb.om.DBConditionType: Sets the currentSelectedCondition attribute of the DBConditionType object
setCurrentSelectedNumber(Integer) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the currentSelectedNumber attribute of the ValuesForVelocityBean object
setCurrentValue(String) - Method in class org.openscience.nmrshiftdb.om.DBConditionType: Sets the currentValue attribute of the DBConditionType object
setDataType(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the value of DataType
setDate(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Set the value of Date
setDate(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Date
setDate(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of Date
setDate(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of Date
setDate(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Set the value of Date
setDBAtom(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Declares an association between this object and a DBAtom object
setDBAtom(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Declares an association between this object and a DBAtom object
setDBAtom(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Declares an association between this object and a DBAtom object
setDBAtom(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Declares an association between this object and a DBAtom object
setDBAtom(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Declares an association between this object and a DBAtom object
setDBAtomKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Provides convenient way to set a relationship based on a ObjectKey.
setDBAtomKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Provides convenient way to set a relationship based on a ObjectKey.
setDBAtomKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Provides convenient way to set a relationship based on a ObjectKey.
setDBAtomKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Provides convenient way to set a relationship based on a ObjectKey.
setDBAtomKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Provides convenient way to set a relationship based on a ObjectKey.
setDBAtomRelatedByAtomId1(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Declares an association between this object and a DBAtom object
setDBAtomRelatedByAtomId1Key(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Provides convenient way to set a relationship based on a ObjectKey.
setDBAtomRelatedByAtomId2(DBAtom) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Declares an association between this object and a DBAtom object
setDBAtomRelatedByAtomId2Key(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Provides convenient way to set a relationship based on a ObjectKey.
setDBAuthor(DBAuthor) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Declares an association between this object and a DBAuthor object
setDBAuthor(DBAuthor) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Declares an association between this object and a DBAuthor object
setDBAuthorKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Provides convenient way to set a relationship based on a ObjectKey.
setDBAuthorKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Provides convenient way to set a relationship based on a ObjectKey.
setDBBond(DBBond) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Declares an association between this object and a DBBond object
setDBBondKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Provides convenient way to set a relationship based on a ObjectKey.
setDBBook(DBBook) - Method in class org.openscience.nmrshiftdb.om.DBArticle: Declares an association between this object and a DBLiterature object
setDBBook(DBBook) - Method in class org.openscience.nmrshiftdb.om.DBBookDBPublisher: Sets a dBBook as the literature attribute of the DBBookDBPublisher object.
setDBCanonicalNameType(DBCanonicalNameType) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Declares an association between this object and a DBCanonicalNameType object
setDBCanonicalNameTypeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Provides convenient way to set a relationship based on a ObjectKey.
setDBCondition(DBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Declares an association between this object and a DBCondition object
setDBCondition(DBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Declares an association between this object and a DBCondition object
setDBCondition(DBCondition) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Declares an association between this object and a DBCondition object
setDBConditionKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Provides convenient way to set a relationship based on a ObjectKey.
setDBConditionKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Provides convenient way to set a relationship based on a ObjectKey.
setDBConditionKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Provides convenient way to set a relationship based on a ObjectKey.
setDBConditionType(DBConditionType) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Declares an association between this object and a DBConditionType object
setDBConditionTypeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Provides convenient way to set a relationship based on a ObjectKey.
setDBCoordinateSetType(DBCoordinateSetType) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Declares an association between this object and a DBCoordinateSetType object
setDBCoordinateSetType(DBCoordinateSetType) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Declares an association between this object and a DBCoordinateSetType object
setDBCoordinateSetTypeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Provides convenient way to set a relationship based on a ObjectKey.
setDBCoordinateSetTypeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Provides convenient way to set a relationship based on a ObjectKey.
setDbe(double) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Dbe
setDBJournal(DBJournal) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Declares an association between this object and a DBJournal object
setDBJournalKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Provides convenient way to set a relationship based on a ObjectKey.
setDBJournalVolume(DBJournalVolume) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Declares an association between this object and a DBJournalVolume object
setDBJournalVolumeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Provides convenient way to set a relationship based on a ObjectKey.
setDBKeyword(DBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Declares an association between this object and a DBKeyword object
setDBKeyword(DBKeyword) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Declares an association between this object and a DBKeyword object
setDBKeywordKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Provides convenient way to set a relationship based on a ObjectKey.
setDBKeywordKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Provides convenient way to set a relationship based on a ObjectKey.
setDBLabGroup(DBLabGroup) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Declares an association between this object and a DBLabGroup object
setDBLabGroupKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Provides convenient way to set a relationship based on a ObjectKey.
setDBLiterature(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Declares an association between this object and a DBLiterature object
setDBLiterature(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Declares an association between this object and a DBLiterature object
setDBLiterature(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Declares an association between this object and a DBLiterature object
setDBLiterature(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Declares an association between this object and a DBLiterature object
setDBLiterature(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Declares an association between this object and a DBLiterature object
setDBLiterature(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Declares an association between this object and a DBLiterature object
setDBLiteratureKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Provides convenient way to set a relationship based on a ObjectKey.
setDBLiteratureKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Provides convenient way to set a relationship based on a ObjectKey.
setDBLiteratureKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Provides convenient way to set a relationship based on a ObjectKey.
setDBLiteratureKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Provides convenient way to set a relationship based on a ObjectKey.
setDBLiteratureKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Provides convenient way to set a relationship based on a ObjectKey.
setDBLiteratureKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Provides convenient way to set a relationship based on a ObjectKey.
setDBLiteratureRelatedByLiteratureId(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Declares an association between this object and a DBLiterature object
setDBLiteratureRelatedByLiteratureIdKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Provides convenient way to set a relationship based on a ObjectKey.
setDBLiteratureRelatedByPublishedInBook(DBLiterature) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Declares an association between this object and a DBLiterature object
setDBLiteratureRelatedByPublishedInBookKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Provides convenient way to set a relationship based on a ObjectKey.
setDBMachine(DBMachine) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Declares an association between this object and a DBMachine object
setDBMachineKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Provides convenient way to set a relationship based on a ObjectKey.
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Declares an association between this object and a DBMolecule object
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Declares an association between this object and a DBMolecule object
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Declares an association between this object and a DBMolecule object
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Declares an association between this object and a DBMolecule object
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Declares an association between this object and a DBMolecule object
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Declares an association between this object and a DBMolecule object
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Declares an association between this object and a DBMolecule object
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Declares an association between this object and a DBMolecule object
setDBMolecule(DBMolecule) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Declares an association between this object and a DBMolecule object
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Provides convenient way to set a relationship based on a ObjectKey.
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Provides convenient way to set a relationship based on a ObjectKey.
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Provides convenient way to set a relationship based on a ObjectKey.
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Provides convenient way to set a relationship based on a ObjectKey.
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Provides convenient way to set a relationship based on a ObjectKey.
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Provides convenient way to set a relationship based on a ObjectKey.
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Provides convenient way to set a relationship based on a ObjectKey.
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Provides convenient way to set a relationship based on a ObjectKey.
setDBMoleculeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Provides convenient way to set a relationship based on a ObjectKey.
setDBPublisher(DBPublisher) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Declares an association between this object and a DBPublisher object
setDBPublisherKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Provides convenient way to set a relationship based on a ObjectKey.
setDBRawFile(DBRawFile) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Declares an association between this object and a DBRawFile object
setDBRawFileKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Provides convenient way to set a relationship based on a ObjectKey.
setDBReviewGroup(DBReviewGroup) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Declares an association between this object and a DBReviewGroup object
setDBReviewGroupKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Provides convenient way to set a relationship based on a ObjectKey.
setDBSample(DBSample) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Declares an association between this object and a DBSample object
setDBSampleKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Provides convenient way to set a relationship based on a ObjectKey.
setDBShiftsArray(DBShift[]) - Method in class org.openscience.nmrshiftdb.om.DBSignal: Sets the dBShiftsArray attribute of the DBSignal object
setDBSignal(DBSignal) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Declares an association between this object and a DBSignal object
setDBSignal(DBSignal) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Declares an association between this object and a DBSignal object
setDBSignalKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Provides convenient way to set a relationship based on a ObjectKey.
setDBSignalKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Declares an association between this object and a DBSpectrum object
setDBSpectrum(DBSpectrum) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Declares an association between this object and a DBSpectrum object
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumType(DBSpectrumType) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Declares an association between this object and a DBSpectrumType object
setDBSpectrumType(DBSpectrumType) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Declares an association between this object and a DBSpectrumType object
setDBSpectrumType(DBSpectrumType) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Declares an association between this object and a DBSpectrumType object
setDBSpectrumTypeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumTypeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Provides convenient way to set a relationship based on a ObjectKey.
setDBSpectrumTypeKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Provides convenient way to set a relationship based on a ObjectKey.
setDefaultMachine(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of DefaultMachine
setDegree(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Set the value of Degree
setDelta(String) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the delta attribute of the ValuesForVelocityBean object
setDescription(byte[]) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Set the value of Description
setDescription(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Set the value of Description
setDescription(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Set the value of Description
setDescriptionSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Set the value of DescriptionSoundex
setDescriptionSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Set the value of DescriptionSoundex
setDictRef(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the value of DictRef
setDimensionality(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Set the value of Dimensionality
setDisplayText(String) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the displayText attribute of the ValuesForVelocityBean object
setDoi(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the value of Doi
setDoubleBondConfiguration(boolean) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the doubleBondConfiguration attribute of the SubmittingData object
setEdit(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Set the value of Edit
setEditorOrder(int) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Set the value of EditorOrder
setEditSpectrum(int) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the editSpectrum attribute of the SubmittingData object
setElementSymbol(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Set the value of ElementSymbol
setEtAl(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the value of EtAl
setExistingMoleculeId(int) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: If you set this and the smilesNonChiralProv, smilesChiralProv, isChiralProv before save, we do not look for an esisting moleucle, but use this
setFieldStrength(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of FieldStrength
setFingerprint(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of Fingerprint
setFingerprint() - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Sets the fingerprint values of the DBMolecule object, taking the molecule from db.
setFingerprint(IMolecule) - Method in class org.openscience.nmrshiftdb.om.DBMolecule: Sets the fingerprint values of the DBMolecule object.
setFinished(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of Finished
setFormalCharge(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of FormalCharge
setFp0(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp0
setFp1(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp1
setFp10(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp10
setFp11(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp11
setFp12(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp12
setFp13(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp13
setFp14(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp14
setFp15(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp15
setFp2(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp2
setFp3(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp3
setFp4(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp4
setFp5(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp5
setFp6(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp6
setFp7(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp7
setFp8(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp8
setFp9(long) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Fp9
setGuestbookId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Set the value of GuestbookId
setHetero(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of Hetero
setHoseCode(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of HoseCode
setHoseCodeWithRings(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of HoseCodeWithRings
setHyperlink(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Set the value of Hyperlink
setHyperlink(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Set the value of Hyperlink
setid - Variable in class org.openscience.nmrshiftdb.om.DBMolecule
setIdentifier(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Set the value of Identifier
setIdentifier(String) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the identifier attribute of the ValuesForVelocityBean object
setIdentifiers(Map) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the identifiers attribute of the SubmittingData object
setIntensity(float) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Set the value of Intensity
setIntensity(String) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the intensity attribute of the ValuesForVelocityBean object
setIsAromatic(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of IsAromatic
setIsAromatic(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Set the value of IsAromatic
setIsChoosen(boolean) - Method in class org.openscience.nmrshiftdb.om.DBKeyword: Sets the isChoosen attribute of the DBKeyword object
setIsConfigurationSpecified(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Set the value of IsConfigurationSpecified
setIsDoubleBondSpecified(boolean[]) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the isDoubleBondSpecified attribute of the SubmittingData object
setIsInRange(boolean) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the isInRange attribute of the ValuesForVelocityBean object
setIssueNumber(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Set the value of IssueNumber
setIsVisible(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of IsVisible
setIta(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Set the value of Ita
setJetspeedprops(Properties) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
setJournalId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Set the value of JournalId
setJournalId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Set the value of JournalId
setJournalVolumeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Set the value of JournalVolumeId
setKeepAssignmentEntries(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the keepAssignmentEntries attribute of the SubmittingData object
setKeyword(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Set the value of Keyword
setKeywordId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Set the value of KeywordId
setKeywordId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Set the value of KeywordId
setKeywordId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Set the value of KeywordId
setKeywordSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Set the value of KeywordSoundex
setLabgroupId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Set the value of LabgroupId
setLabgroupId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of LabgroupId
setLabgroupName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Set the value of LabgroupName
setLeader(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Set the value of Leader
setLevel(int) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the level attribute of the SubmittingData object
setLiterature(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of Literature
setLiterature(List) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the literature attribute of the SubmittingData object
setLiteratureId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Set the value of LiteratureId
setLiteratureId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Set the value of LiteratureId
setLiteratureId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Set the value of LiteratureId
setLiteratureId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Set the value of LiteratureId
setLiteratureId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the value of LiteratureId
setLiteratureId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Set the value of LiteratureId
setLiteratureId(int) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Set the value of LiteratureId
setLiteratureId(int) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Set the value of LiteratureId
setLiteratureSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of LiteratureSoundex
setLower(float) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the lower attribute of the ValuesForVelocityBean object
setLowestLoadServer(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Set the value of LowestLoadServer
setMachine(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of Machine
setMachineId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of MachineId
setMark(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Set the value of Mark
setMarkDate(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Set the value of MarkDate
setMeasureChanger(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of MeasureChanger
setMeasured() - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the measured attribute of the SubmittingData object
setMeasureOperator(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of MeasureOperator
setMeasureSelf(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of MeasureSelf
setMol(String, IMolecule, boolean, boolean, boolean) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets all molecule related attributes, taking the hydrogens from input.
setMol(String, boolean, boolean, boolean) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets all molecule related attributes, generating hydrogens.
setMolecularWeight(double) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of MolecularWeight
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of MoleculeId
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Set the value of MoleculeId
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Set the value of MoleculeId
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Set the value of MoleculeId
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of MoleculeId
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Set the value of MoleculeId
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Set the value of MoleculeId
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of MoleculeId
setMoleculeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Set the value of MoleculeId
setMoleculeKeywords(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the moleculeKeywords attribute of the SubmittingData object
setMoleculeLinks(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the moleculeLink attribute of the SubmittingData object
setMolWithH(IMolecule) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the molWithH and the molWithHCount attribute of the SubmittingData object
setMultiplicity(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Set the value of Multiplicity
setMultiplicity(String) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the multiplicity attribute of the ValuesForVelocityBean object
setName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Set the value of Name
setName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Set the value of Name
setName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Set the value of Name
setName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of Name
setName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Set the value of Name
setName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Set the value of Name
setNameForElements(String) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the nameForElements attribute of the ValuesForVelocityBean object
setNameSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Set the value of NameSoundex
setNameSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Set the value of NameSoundex
setNameTotal(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Set the value of NameTotal
setNameTotalSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Set the value of NameTotalSoundex
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUser(NmrshiftdbUser) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Declares an association between this object and a NmrshiftdbUser object
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Provides convenient way to set a relationship based on a ObjectKey.
setNmrshiftdbUserKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Provides convenient way to set a relationship based on a ObjectKey.
setOrderNumber(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Set the value of OrderNumber
setOtherNuclei(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of OtherNuclei
setOtherWishedSpectrum(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of OtherWishedSpectrum
setPagesFrom(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Set the value of PagesFrom
setPagesTo(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Set the value of PagesTo
setPlace(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Set the value of Place
setPossibleAtomNumbers(ArrayList) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the possibleAtomNumbers attribute of the ValuesForVelocityBean object
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBook: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, String) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Set the PrimaryKey using ObjectKey.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int, int, Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int, int) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor: Set the PrimaryKey using a String.
setPrimaryKey(ObjectKey) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Set the PrimaryKey with an ObjectKey
setPrimaryKey(int, int) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Set the PrimaryKey using SimpleKeys.
setPrimaryKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseIsEditor: Set the PrimaryKey using a String.
setProbableStructure(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of ProbableStructure
setProcess(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of Process
setPublishedInBook(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Set the value of PublishedInBook
setPublishedInJournal(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBArticle: Set the value of PublishedInJournal
setPublisherId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Set the value of PublisherId
setPublisherId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher: Set the value of PublisherId
setRange(String) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the range attribute of the ValuesForVelocityBean object
setRawFileId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Set the value of RawFileId
setRawFileId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Set the value of RawFileId
setRequired(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the value of Required
setResult(int) - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
setReviewDate(Date) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Set the value of ReviewDate
setReviewFlag(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of ReviewFlag
setReviewFlagInBackup(DBSpectrum, ServletConfig) - Method in class org.openscience.nmrshiftdb.portlets.ReviewPortlet: Writes an spectrum to disk as an submittingData object.
setReviewgroupId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Set the value of ReviewgroupId
setReviewgroupId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Set the value of ReviewgroupId
setReviewgroupName(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup: Set the value of ReviewgroupName
setReviewKey(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of ReviewKey
setSampleId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Set the value of SampleId
setSampleId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of SampleId
setSar(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Sar
setServcon(ServletConfig) - Method in class org.openscience.nmrshiftdb.util.UrlTool: Sets the servlet configuration value (this is only needed for getServerOverview).
setSessions(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Set the value of Sessions
setSessionsAll(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSessions: Set the value of SessionsAll
setShowpeakpicker(boolean) - Method in class org.openscience.nmrshiftdb.util.SubmittingData
setSignalId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Set the value of SignalId
setSignalId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Set the value of SignalId
setSignalId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: Set the value of SignalId
setSignalstable(ArrayList) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the signalstable attribute of the SubmittingData object
setSimpleSpecfile(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of SimpleSpecfile
setSmilesString(byte[]) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of SmilesString
setSmilesStringChiral(byte[]) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of SmilesStringChiral
setSolvent(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of Solvent
setSpecfile(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of Specfile
setSpecialCare(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of SpecialCare
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSignal: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Set the value of SpectrumId
setSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Set the value of SpectrumId
setSpectrumIdNew(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Set the value of SpectrumIdNew
setSpectrumIdOld(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Set the value of SpectrumIdOld
setSpectrumKeywords(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the spectrumKeywords attribute of the SubmittingData object
setSpectrumLinks(String) - Method in class org.openscience.nmrshiftdb.util.SubmittingData: Sets the spectrumLink attribute of the SubmittingData object
setSpectrumTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope: Set the value of SpectrumTypeId
setSpectrumTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of SpectrumTypeId
setSpectrumTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Set the value of SpectrumTypeId
setSpectrumTypeId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Set the value of SpectrumTypeId
setSssr(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of Sssr
setStatus(int) - Method in class org.openscience.nmrshiftdb.daemons.AbstractDaemon: Set the status for this Daemon
setStereo(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBond: Set the value of Stereo
setSubtitle(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Set the value of Subtitle
setSubtitle(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the value of Subtitle
setSubtitle(String) - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Set the value of Title
setSubtitleBook(String) - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Set the value of Title
setSurname(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor: Set the value of Surname
setSymbol(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBAtom: Set the value of Symbol
setText(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Set the value of Text
setThisAtomAsLinked(IAtom, IMolecule, int) - Static method in class org.openscience.nmrshiftdb.util.AtomUtils: This method is called from checkIfOnlyOneStructure and counts the number of atoms which can be reached from atom.
setTitle(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournal: Set the value of Title
setTitle(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the value of Title
setTitle(String) - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Set the value of Title
setTitleBook(String) - Method in class org.openscience.nmrshiftdb.om.DBLiterature: Set the value of Title
setTitleTotal(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the value of TitleTotal
setTitleTotalSoundex(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the value of TitleTotalSoundex
setUnits(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType: Set the value of Units
setUpper(float) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the upper attribute of the ValuesForVelocityBean object
setUrl(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature: Set the value of Url
setUrl(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile: Set the value of Url
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: Set the value of UserId
setUserId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist: Set the value of UserId
setUsersId(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of UsersId
setUsersIdComment(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of UsersIdComment
setUserSpectrumId(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: Set the value of UserSpectrumId
setValid(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook: Set the value of Valid
setValid(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBMachine: Set the value of Valid
setValue(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBCondition: Set the value of Value
setValue(float) - Method in class org.openscience.nmrshiftdb.om.BaseDBShift: Set the value of Value
setValue(Float) - Method in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Sets the value attribute of the ValuesForVelocityBean object
setVolume(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Set the value of Volume
setWishedSpectrum(String) - Method in class org.openscience.nmrshiftdb.om.BaseDBSample: Set the value of WishedSpectrum
setXCoordinate(double) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Set the value of XCoordinate
setXCoordinate(double) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Set the value of XCoordinate
setYCoordinate(double) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d: Set the value of YCoordinate
setYCoordinate(double) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Set the value of YCoordinate
setYear(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher: Set the value of Year
setYear(int) - Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume: Set the value of Year
setZCoordinate(double) - Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d: Set the value of ZCoordinate
shiftArray - Variable in class org.openscience.nmrshiftdb.om.DBSignal: This is used temporarily in the similarity calculation
shiftlist - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
showpeakpicker - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
sigComp - Static variable in class org.openscience.nmrshiftdb.util.SpectrumUtils
SIGNAL_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer: the column name for the SIGNAL_ID field
SIGNAL_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer: the column name for the SIGNAL_ID field
SIGNAL_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: the column name for the SIGNAL_ID field
SignalComparator - Class in org.openscience.nmrshiftdb.util: This is implememtation of Comparator used for sorting ValueTriples accoring to the first column, i.
SignalComparator() - Constructor for class org.openscience.nmrshiftdb.util.SignalComparator
signalId - Variable in class org.openscience.nmrshiftdb.om.BaseDBShift: The value for the signalId field
signalId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: The value for the signalId field
signalId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom: The value for the signalId field
signalstable - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
similarity - Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
similarity(ArrayList, ArrayList, boolean) - Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
SIMPLE_SPECFILE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the SIMPLE_SPECFILE field
simpleSpecfile - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the simpleSpecfile field
smallestOf(int, int, int) - Static method in class org.openscience.nmrshiftdb.util.lDistance: Min of three int
SMILES_STRING - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the SMILES_STRING field
SMILES_STRING_CHIRAL - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the SMILES_STRING_CHIRAL field
smilesChiralProv - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
smilesNonChiralProv - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
smilesString - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the smilesString field
smilesStringChiral - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the smilesStringChiral field
software - Variable in class org.openscience.nmrshiftdb.util.AbInitioDataset
solvent - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the solvent field
SOLVENT - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the SOLVENT field
solvent - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
sortPosition - Variable in class org.openscience.nmrshiftdb.util.ValueTriple: This gives the value of the
Soundex - Class in org.openscience.nmrshiftdb.util: Find the Soundex of a string.
Soundex() - Constructor for class org.openscience.nmrshiftdb.util.Soundex
soundex(String, String, StringAndInt) - Static method in class org.openscience.nmrshiftdb.util.Soundex: Get the SoundEx value of a string.
soundexMapping - Static variable in class org.openscience.nmrshiftdb.util.Soundex
specfile - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the specfile field
SPECFILE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the SPECFILE field
SPECIAL_CARE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer: the column name for the SPECIAL_CARE field
specialCare - Variable in class org.openscience.nmrshiftdb.om.BaseDBSample: The value for the specialCare field
SPECKEY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
SPECLINK - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
spectramap - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
spectrum - Variable in class org.openscience.nmrshiftdb.util.Export
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer: the column name for the SPECTRUM_ID field
SPECTRUM_ID_NEW - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: the column name for the SPECTRUM_ID_NEW field
SPECTRUM_ID_OLD - Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer: the column name for the SPECTRUM_ID_OLD field
SPECTRUM_NR - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
SPECTRUM_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer: the column name for the SPECTRUM_TYPE_ID field
SPECTRUM_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer: the column name for the SPECTRUM_TYPE_ID field
SPECTRUM_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer: the column name for the SPECTRUM_TYPE_ID field
SPECTRUM_TYPE_ID - Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer: the column name for the SPECTRUM_TYPE_ID field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBCoupling: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSignal: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum: The value for the spectrumId field
spectrumId - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark: The value for the spectrumId field
spectrumID - Static variable in class org.openscience.nmrshiftdb.util.GenerateId
spectrumid - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
spectrumIdNew - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: The value for the spectrumIdNew field
spectrumIdOld - Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit: The value for the spectrumIdOld field
spectrumKeywords - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
SPECTRUMKEYWORDS_FRAGMENT - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
SPECTRUMKEYWORDS_TOTAL - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
spectrumLinks - Variable in class org.openscience.nmrshiftdb.util.SubmittingData
spectrumTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBIsotope: The value for the spectrumTypeId field
spectrumTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum: The value for the spectrumTypeId field
spectrumTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType: The value for the spectrumTypeId field
spectrumTypeId - Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist: The value for the spectrumTypeId field
SpectrumUtils - Class in org.openscience.nmrshiftdb.util: Contains some utils for spectra
SpectrumUtils() - Constructor for class org.openscience.nmrshiftdb.util.SpectrumUtils
sqlLogger - Static variable in class org.openscience.nmrshiftdb.util.GeneralUtils
sssr - Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule: The value for the sssr field
SSSR - Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer: the column name for the SSSR field
SSSR - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
statistics - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Description of the Field
statistics2 - Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean: Description of the Field
status - Variable in class org.openscience.nmrshiftdb.daemons.AbstractDaemon
stereo - Variable in class org.openscience.nmrshiftdb.om.BaseDBBond: The value for the stereo field
STEREO - Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer: the column name for the STEREO field
string1 - Variable in class org.openscience.nmrshiftdb.util.StringAndStringAndBoolean
string2 - Variable in class org.openscience.nmrshiftdb.util.StringAndStringAndBoolean
StringAndInt - Class in org.openscience.nmrshiftdb.util: This is a class containing a String and an int
StringAndInt() - Constructor for class org.openscience.nmrshiftdb.util.StringAndInt: Constructor for the StringAndInt object
StringAndInt(String, int) - Constructor for class org.openscience.nmrshiftdb.util.StringAndInt: Constructor for the StringAndInt object
StringAndIntAndBoolean - Class in org.openscience.nmrshiftdb.util: This is a class containing a String, an int an a boolean
StringAndIntAndBoolean() - Constructor for class org.openscience.nmrshiftdb.util.StringAndIntAndBoolean
StringAndIntComparator - Class in org.openscience.nmrshiftdb.util: This is implememtation of Comparator used for sorting StringAndInts accoring to the int
StringAndIntComparator() - Constructor for class org.openscience.nmrshiftdb.util.StringAndIntComparator
StringAndStringAndBoolean - Class in org.openscience.nmrshiftdb.util: This is a class containing two Strings and a boolean.
StringAndStringAndBoolean() - Constructor for class org.openscience.nmrshiftdb.util.StringAndStringAndBoolean
STRUCTURESHISTORY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
STRUCTURESHISTORY_SMILES - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
submitPage(String, SubmittingData, RunData, HttpSession) - Method in class org.openscience.nmrshiftdb.portlets.SubmitPortlet: Puts together the submit page
SubmitPortlet - Class in org.openscience.nmrshiftdb.portlets: This is the portlet handlang submitting spectra/molecules...
SubmitPortlet() - Constructor for class org.openscience.nmrshiftdb.portlets.SubmitPortlet
SubmittingData - Class in org.openscience.nmrshiftdb.util: This class is used for holding the data of a molecule and an assigned spectrum in the session while the user is doing the sumbmit
SubmittingData(String) - Constructor for class org.openscience.nmrshiftdb.util.SubmittingData: Constructor for the SubmittingData object
SUBSPECTRUM - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
SUBSTANCE - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
SUBSTRUCTURE_EXACT - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
SUBSTRUCTURE_SIMILARITY - Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
subtitle - Variable in class org.openscience.nmrshiftdb.om.BaseDBJournal: The value for the subtitle field
SUBTITLE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer: the column name for the SUBTITLE field
subtitle - Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature: The value for the subtitle field
SUBTITLE - Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer: the column name for the SUBTITLE field
subtitlebook - Variable in class org.openscience.nmrshiftdb.om.DBLiterature: In case it's an article in a book: The subtitle
surname - Variable in class org.openscience.nmrshiftdb.om.BaseDBAuthor: The value for the surname field
SURNAME - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer: the column name for the SURNAME field
symbol - Variable in class org.openscience.nmrshiftdb.om.BaseDBAtom: The value for the symbol field
SYMBOL - Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer: the column name for the SYMBOL field




T

table - 
Variable in class org.openscience.nmrshiftdb.util.OneToManyTable
 
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBArticlePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBAtomPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBAuthorPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtomPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBBondPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNamePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameTypePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBChemicalNamePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetTypePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCouplingPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBIdentifierPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBIsotopePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBKeywordPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBLabGroupPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeywordPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlinkPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBPublisherPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrumPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSessionsPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtomPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSignalPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBConditionPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeywordPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiteraturePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlinkPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseIsAuthorPeer
the table name for this class
TABLE_NAME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseIsEditorPeer
the table name for this class
TEMP_PERMISSION - 
Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.security.ReviewGroupsUpdateAction
 
temperature - 
Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
 
testAssignCml() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
testDoAssignment() - 
Method in class org.openscience.nmrshiftdb.tests.NMRShiftDBServicesTest
 
testDoAssignmentServlet() - 
Method in class org.openscience.nmrshiftdb.tests.NMRShiftDBServicesTest
 
testDoPrediction() - 
Method in class org.openscience.nmrshiftdb.tests.NMRShiftDBServicesTest
 
testExportinchi() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
testExportLastInputs() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
testExprtBoth() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
testExprtmdl() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
testExprtMol() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
testExprtSpec() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
testGetSpectrumTypes() - 
Method in class org.openscience.nmrshiftdb.tests.NMRShiftDBServicesTest
 
testRss() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
testRss() - 
Method in class org.openscience.nmrshiftdb.tests.UserServiceTest
 
testTest() - 
Method in class org.openscience.nmrshiftdb.tests.ServletTests
 
text - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook
The value for the text field
TEXT - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer
the column name for the TEXT field
thisDate - 
Variable in class org.openscience.nmrshiftdb.util.SubmittingData
 
thisURL - 
Variable in class org.openscience.nmrshiftdb.util.SubmittingData
 
thisUserId - 
Variable in class org.openscience.nmrshiftdb.util.SubmittingData
 
timeformatted - 
Variable in class org.openscience.nmrshiftdb.util.SubmittingData
 
title - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBJournal
The value for the title field
TITLE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalPeer
the column name for the TITLE field
title - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature
The value for the title field
TITLE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
the column name for the TITLE field
TITLE_TOTAL - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
the column name for the TITLE_TOTAL field
TITLE_TOTAL_SOUNDEX - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
the column name for the TITLE_TOTAL_SOUNDEX field
titlebook - 
Variable in class org.openscience.nmrshiftdb.om.DBLiterature
In case it's an article in a book: The title
titleTotal - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature
The value for the titleTotal field
titleTotalSoundex - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature
The value for the titleTotalSoundex field
to - 
Variable in class org.openscience.nmrshiftdb.om.DBLiterature
In case it's an article the page it end at
toInputSpectrum(ArrayList) - 
Static method in class org.openscience.nmrshiftdb.util.ParseUtils
Returns an array of ValueTriple in the format of the input String
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBArticle
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBAtom
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBAuthor
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBBond
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBBondDBAtom
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBBook
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBBookmark
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalName
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBCanonicalNameType
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBChemicalName
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBCondition
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBConditionType
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSetType
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBCoupling
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBGuestbook
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBIdentifier
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBIsotope
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBJournal
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBKeyword
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBLabGroup
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBLiterature
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBMachine
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBMolecule
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeDBKeyword
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBMoleculeHyperlink
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBPublisher
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBRawFile
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBRawFileDBSpectrum
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroup
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSample
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSessions
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBShift
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSignal
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSignalDBAtom
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrum
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBCondition
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBKeyword
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumDBLiterature
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumHyperlink
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseDBWishlist
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseIsAuthor
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseIsEditor
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.BaseNmrshiftdbUser
 
toString() - 
Method in class org.openscience.nmrshiftdb.om.DBLiterature
Gives a nicly formatted string.
toString() - 
Method in class org.openscience.nmrshiftdb.util.AbInitioDataset
 
toString() - 
Method in class org.openscience.nmrshiftdb.util.ValueTriple
Returns a string representation of the valueTriple
TOTALSPECTRUM - 
Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
 
TOTALSTRUCTURE - 
Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
 
toupper(char) - 
Static method in class org.openscience.nmrshiftdb.util.lDistance
Turns a char to upper case
trimSpectrumBelow(double[], double) - 
Method in class org.openscience.nmrshiftdb.util.PeakPicker
 
TRUE - 
Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
 
tuser - 
Static variable in class org.openscience.nmrshiftdb.util.UrlTool
 
type - 
Variable in class org.openscience.nmrshiftdb.om.DBLiterature
Type of literature as in NmrshiftdbConstants
TYPE_SEPARATOR - 
Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
 



U

units - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBConditionType
The value for the units field
UNITS - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionTypePeer
the column name for the UNITS field
UNKNOWN - 
Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
 
UNREPORTED - 
Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
 
unusedtext - 
Variable in class org.openscience.nmrshiftdb.om.DBSpectrum
 
UPLOAD_JCAMP_SEARCH - 
Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
 
upper - 
Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
 
url - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBLiterature
The value for the url field
URL - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBLiteraturePeer
the column name for the URL field
url - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBRawFile
The value for the url field
URL - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBRawFilePeer
the column name for the URL field
UrlTool - Class in org.openscience.nmrshiftdb.util
This is class building the http(s) url from request url.
UrlTool() - 
Constructor for class org.openscience.nmrshiftdb.util.UrlTool
 
US_ENGLISH_MAPPING - 
Static variable in class org.openscience.nmrshiftdb.util.Soundex
 
useCSS - 
Variable in class org.openscience.nmrshiftdb.util.Export
 
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookmarkPeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBMoleculePeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUserPeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumPeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumTypePeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEditPeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMarkPeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer
the column name for the USER_ID field
USER_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBWishlistPeer
the column name for the USER_ID field
USER_SPECTRUM_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumPeer
the column name for the USER_SPECTRUM_ID field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBBookmark
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBMolecule
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBReviewGroupDBUser
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBSample
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrum
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBSpectrumType
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumEdit
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrumMark
The value for the userId field
userId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBWishlist
The value for the userId field
username - 
Variable in class org.openscience.nmrshiftdb.util.VectorWithSessionBinding
 
UserReviewgroupUpdateAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets.security
This action sets up the template context for editing review groups roles in the Turbine database
 for a given user.
UserReviewgroupUpdateAction() - 
Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.security.UserReviewgroupUpdateAction
 
users - 
Static variable in class org.openscience.nmrshiftdb.util.UrlTool
 
USERS_ID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
the column name for the USERS_ID field
USERS_ID_COMMENT - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
the column name for the USERS_ID_COMMENT field
UserServiceTest - Class in org.openscience.nmrshiftdb.tests
 
UserServiceTest(String) - 
Constructor for class org.openscience.nmrshiftdb.tests.UserServiceTest
 
usersId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBSample
The value for the usersId field
usersIdComment - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBSample
The value for the usersIdComment field
userSpectrumId - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBUserDBSpectrum
The value for the userSpectrumId field



V

valid - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbook
The value for the valid field
VALID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBGuestbookPeer
the column name for the VALID field
valid - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBMachine
The value for the valid field
VALID - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBMachinePeer
the column name for the VALID field
value - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBCondition
The value for the value field
VALUE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBConditionPeer
the column name for the VALUE field
value - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBShift
The value for the value field
VALUE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBShiftPeer
the column name for the VALUE field
value - 
Variable in class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
 
value1 - 
Variable in class org.openscience.nmrshiftdb.util.ValueTriple
Shift
value2 - 
Variable in class org.openscience.nmrshiftdb.util.ValueTriple
Intensity, 0=not defined
valueBound(HttpSessionBindingEvent) - 
Method in class org.openscience.nmrshiftdb.util.VectorWithSessionBinding
Takes care of session tracking
ValuesForVelocityBean - Class in org.openscience.nmrshiftdb.util
This is a java bean needed for putting data into the velocity context
ValuesForVelocityBean() - 
Constructor for class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
Constructor for the ValuesForVelocityBean object
ValuesForVelocityBean(String, String, String) - 
Constructor for class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
Constructor for the ValuesForVelocityBean object
ValuesForVelocityBean(Float, String, double, double, String, String) - 
Constructor for class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
Constructor for the ValuesForVelocityBean object
ValuesForVelocityBean(Float, String, double, double, String, String, IAtom) - 
Constructor for class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
Constructor for the ValuesForVelocityBean object
ValuesForVelocityBean(Float, String, double, double, String, String, String) - 
Constructor for class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
Constructor for the ValuesForVelocityBean object
ValuesForVelocityBean(Float, String, double, double, String, String, boolean) - 
Constructor for class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
Constructor for the ValuesForVelocityBean object
ValuesForVelocityBean(Float, String, double, double, String, String, String, String) - 
Constructor for class org.openscience.nmrshiftdb.util.ValuesForVelocityBean
Constructor for the ValuesForVelocityBean object
ValueTriple - Class in org.openscience.nmrshiftdb.util
This is a class containing two double and an array of integer values, altogether representing a signal
ValueTriple(float) - 
Constructor for class org.openscience.nmrshiftdb.util.ValueTriple
Constructor for the ValueTriple object
ValueTriple(float, float) - 
Constructor for class org.openscience.nmrshiftdb.util.ValueTriple
Constructor for the ValueTriple object
ValueTriple() - 
Constructor for class org.openscience.nmrshiftdb.util.ValueTriple
Constructor for the ValueTriple object
ValueTripleComparator - Class in org.openscience.nmrshiftdb.util
This is implememtation of Comparator used for sorting ValueTriples accoring to the distance to a value given in ValueTriple as ComparatorValue
ValueTripleComparator() - 
Constructor for class org.openscience.nmrshiftdb.util.ValueTripleComparator
Constructor for the ValueTripleComparator object
ValueTripleComparator(boolean) - 
Constructor for class org.openscience.nmrshiftdb.util.ValueTripleComparator
Constructor for the ValueTripleComparator object
ValueTripleComparator2 - Class in org.openscience.nmrshiftdb.util
This is implememtation of Comparator used for sorting ValueTriples accoring to the distance to a value given in ValueTriple as ComparatorValue
ValueTripleComparator2() - 
Constructor for class org.openscience.nmrshiftdb.util.ValueTripleComparator2
Constructor for the ValueTripleComparator object
valueUnbound(HttpSessionBindingEvent) - 
Method in class org.openscience.nmrshiftdb.util.VectorWithSessionBinding
This writes this object serialized with jsx to a field in the TURBINE_USER table which has the name under which this object is bound to the session
vdwrdes - 
Static variable in class org.openscience.nmrshiftdb.util.AtomUtils
 
VectorWithSessionBinding - Class in org.openscience.nmrshiftdb.util
This is a vector which writes itself to the db when unbound from session
VectorWithSessionBinding(String) - 
Constructor for class org.openscience.nmrshiftdb.util.VectorWithSessionBinding
Constructor for the VectorWithSessionBinding object
VfvbComparator - Class in org.openscience.nmrshiftdb.util
This is implememtation of Comparator used for sorting ValueTriples accoring to the distance to a value given in ValueTriple as ComparatorValue
VfvbComparator() - 
Constructor for class org.openscience.nmrshiftdb.util.VfvbComparator
Constructor for the ValueTripleComparator object
volume - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume
The value for the volume field
VOLUME - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer
the column name for the VOLUME field
volume - 
Variable in class org.openscience.nmrshiftdb.om.DBLiterature
In case it's a journal article: The volume



W

warn(String, BufferedReader) - 
Static method in class org.openscience.nmrshiftdb.AdminPanel
Prints a warning and asks if to continue
webinfdir - 
Static variable in class org.openscience.nmrshiftdb.webservices.NMRShiftDBServiceBindingImpl
 
WebPagePortletWithURLFromRequest - Class in org.openscience.nmrshiftdb.portlets
A class that loads a web page and filters it to have certain features
 deleted.
WebPagePortletWithURLFromRequest() - 
Constructor for class org.openscience.nmrshiftdb.portlets.WebPagePortletWithURLFromRequest
 
WEIGHT - 
Static variable in class org.openscience.nmrshiftdb.util.NmrshiftdbConstants
 
WISHED_SPECTRUM - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBSamplePeer
the column name for the WISHED_SPECTRUM field
wishedSpectrum - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBSample
The value for the wishedSpectrum field
WishlistPortletAction - Class in org.openscience.nmrshiftdb.modules.actions.portlets
Handles actions for the wishlist portlet.
WishlistPortletAction() - 
Constructor for class org.openscience.nmrshiftdb.modules.actions.portlets.WishlistPortletAction
 
WORKER - 
Static variable in class org.openscience.nmrshiftdb.modules.actions.portlets.OrderAction
 
writeRSS(HttpServletResponse, String, int, HttpServletRequest) - 
Method in class org.openscience.nmrshiftdb.NmrshiftdbServlet
Writes a rss cml feed to res.



X

X_COORDINATE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer
the column name for the X_COORDINATE field
X_COORDINATE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer
the column name for the X_COORDINATE field
xAxisLabel - 
Variable in class org.openscience.nmrshiftdb.util.PeakPicker
 
xCoordinate - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
The value for the xCoordinate field
xCoordinate - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
The value for the xCoordinate field
xValArray - 
Variable in class org.openscience.nmrshiftdb.util.PeakPicker
 



Y

Y_COORDINATE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2dPeer
the column name for the Y_COORDINATE field
Y_COORDINATE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer
the column name for the Y_COORDINATE field
yAxisLabel - 
Variable in class org.openscience.nmrshiftdb.util.PeakPicker
 
yCoordinate - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet2d
The value for the yCoordinate field
yCoordinate - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
The value for the yCoordinate field
year - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisher
The value for the year field
YEAR - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBBookDBPublisherPeer
the column name for the YEAR field
year - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolume
The value for the year field
YEAR - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBJournalVolumePeer
the column name for the YEAR field
year - 
Variable in class org.openscience.nmrshiftdb.om.DBLiterature
In case it's a journal article: The year
yValArray - 
Variable in class org.openscience.nmrshiftdb.util.PeakPicker
 



Z

Z_COORDINATE - 
Static variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3dPeer
the column name for the Z_COORDINATE field
zCoordinate - 
Variable in class org.openscience.nmrshiftdb.om.BaseDBCoordinateSet3d
The value for the zCoordinate field
zipDir(File, ZipOutputStream, File) - 
Static method in class org.openscience.nmrshiftdb.util.GeneralUtils
Recursivly zips a directory in an zipoutputstream


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