org.openscience.nmrshiftdb.om
Class BaseDBMolecule

java.lang.Object
  org.apache.torque.om.BaseObject
      org.openscience.nmrshiftdb.om.BaseDBMolecule

All Implemented Interfaces:

java.io.Serializable, org.apache.torque.om.Persistent

Direct Known Subclasses:

DBMolecule

public abstract class BaseDBMolecule
extends org.apache.torque.om.BaseObject

This class was autogenerated by Torque on: [Fri Nov 28 18:04:08 GMT 2008] You should not use this class directly. It should not even be extended all references should be to DBMolecule

See Also:

Serialized Form

Field Summary

private boolean	alreadyInSave flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
private NmrshiftdbUser	aNmrshiftdbUser
private java.lang.String	casNumber The value for the casNumber field
protected java.util.List	collDBAtoms Collection to store aggregation of collDBAtoms
protected java.util.List	collDBBookmarks Collection to store aggregation of collDBBookmarks
protected java.util.List	collDBCanonicalNames Collection to store aggregation of collDBCanonicalNames
protected java.util.List	collDBChemicalNames Collection to store aggregation of collDBChemicalNames
protected java.util.List	collDBMoleculeDBKeywords Collection to store aggregation of collDBMoleculeDBKeywords
protected java.util.List	collDBMoleculeHyperlinks Collection to store aggregation of collDBMoleculeHyperlinks
protected java.util.List	collDBSamples Collection to store aggregation of collDBSamples
protected java.util.List	collDBSpectrums Collection to store aggregation of collDBSpectrums
protected java.util.List	collDBWishlists Collection to store aggregation of collDBWishlists
private byte[]	comment The value for the comment field
private java.util.Date	date The value for the date field
private double	dbe The value for the dbe field
private static java.util.List	fieldNames
private long	fp0 The value for the fp0 field
private long	fp1 The value for the fp1 field
private long	fp10 The value for the fp10 field
private long	fp11 The value for the fp11 field
private long	fp12 The value for the fp12 field
private long	fp13 The value for the fp13 field
private long	fp14 The value for the fp14 field
private long	fp15 The value for the fp15 field
private long	fp2 The value for the fp2 field
private long	fp3 The value for the fp3 field
private long	fp4 The value for the fp4 field
private long	fp5 The value for the fp5 field
private long	fp6 The value for the fp6 field
private long	fp7 The value for the fp7 field
private long	fp8 The value for the fp8 field
private long	fp9 The value for the fp9 field
private org.apache.torque.util.Criteria	lastDBAtomsCriteria The criteria used to select the current contents of collDBAtoms
private org.apache.torque.util.Criteria	lastDBBookmarksCriteria The criteria used to select the current contents of collDBBookmarks
private org.apache.torque.util.Criteria	lastDBCanonicalNamesCriteria The criteria used to select the current contents of collDBCanonicalNames
private org.apache.torque.util.Criteria	lastDBChemicalNamesCriteria The criteria used to select the current contents of collDBChemicalNames
private org.apache.torque.util.Criteria	lastDBMoleculeDBKeywordsCriteria The criteria used to select the current contents of collDBMoleculeDBKeywords
private org.apache.torque.util.Criteria	lastDBMoleculeHyperlinksCriteria The criteria used to select the current contents of collDBMoleculeHyperlinks
private org.apache.torque.util.Criteria	lastDBSamplesCriteria The criteria used to select the current contents of collDBSamples
private org.apache.torque.util.Criteria	lastDBSpectrumsCriteria The criteria used to select the current contents of collDBSpectrums
private org.apache.torque.util.Criteria	lastDBWishlistsCriteria The criteria used to select the current contents of collDBWishlists
private double	molecularWeight The value for the molecularWeight field
private int	moleculeId The value for the moleculeId field
private static DBMoleculePeer	peer The Peer class
private int	sar The value for the sar field
private byte[]	smilesString The value for the smilesString field
private byte[]	smilesStringChiral The value for the smilesStringChiral field
private int	sssr The value for the sssr field
private int	userId The value for the userId field

Fields inherited from class org.apache.torque.om.BaseObject

NEW_ID

Constructor Summary

BaseDBMolecule()

Method Summary

void	addDBAtom(DBAtom l) Method called to associate a DBAtom object to this object through the DBAtom foreign key attribute
void	addDBBookmark(DBBookmark l) Method called to associate a DBBookmark object to this object through the DBBookmark foreign key attribute
void	addDBCanonicalName(DBCanonicalName l) Method called to associate a DBCanonicalName object to this object through the DBCanonicalName foreign key attribute
void	addDBChemicalName(DBChemicalName l) Method called to associate a DBChemicalName object to this object through the DBChemicalName foreign key attribute
void	addDBMoleculeDBKeyword(DBMoleculeDBKeyword l) Method called to associate a DBMoleculeDBKeyword object to this object through the DBMoleculeDBKeyword foreign key attribute
void	addDBMoleculeHyperlink(DBMoleculeHyperlink l) Method called to associate a DBMoleculeHyperlink object to this object through the DBMoleculeHyperlink foreign key attribute
void	addDBSample(DBSample l) Method called to associate a DBSample object to this object through the DBSample foreign key attribute
void	addDBSpectrum(DBSpectrum l) Method called to associate a DBSpectrum object to this object through the DBSpectrum foreign key attribute
void	addDBWishlist(DBWishlist l) Method called to associate a DBWishlist object to this object through the DBWishlist foreign key attribute
DBMolecule	copy() Makes a copy of this object.
protected DBMolecule	copyInto(DBMolecule copyObj)
java.lang.Object	getByName(java.lang.String name) Retrieves a field from the object by name passed in as a String.
java.lang.Object	getByPeerName(java.lang.String name) Retrieves a field from the object by name passed in as a String.
java.lang.Object	getByPosition(int pos) Retrieves a field from the object by Position as specified in the xml schema.
java.lang.String	getCasNumber() Get the CasNumber
byte[]	getComment() Get the Comment
java.util.Date	getDate() Get the Date
java.util.List	getDBAtoms() If this collection has already been initialized, returns the collection.
java.util.List	getDBAtoms(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBAtoms(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBAtoms(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBAtomsJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBBookmarks() If this collection has already been initialized, returns the collection.
java.util.List	getDBBookmarks(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBBookmarks(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBBookmarks(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBBookmarksJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBBookmarksJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBCanonicalNames() If this collection has already been initialized, returns the collection.
java.util.List	getDBCanonicalNames(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBCanonicalNames(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBCanonicalNames(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBCanonicalNamesJoinDBCanonicalNameType(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBCanonicalNamesJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBChemicalNames() If this collection has already been initialized, returns the collection.
java.util.List	getDBChemicalNames(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBChemicalNames(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBChemicalNames(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBChemicalNamesJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
double	getDbe() Get the Dbe
java.util.List	getDBMoleculeDBKeywords() If this collection has already been initialized, returns the collection.
java.util.List	getDBMoleculeDBKeywords(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBMoleculeDBKeywords(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBMoleculeDBKeywords(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBMoleculeDBKeywordsJoinDBKeyword(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBMoleculeDBKeywordsJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBMoleculeHyperlinks() If this collection has already been initialized, returns the collection.
java.util.List	getDBMoleculeHyperlinks(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBMoleculeHyperlinks(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBMoleculeHyperlinks(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBMoleculeHyperlinksJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSamples() If this collection has already been initialized, returns the collection.
java.util.List	getDBSamples(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBSamples(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSamples(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSamplesJoinDBCondition(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSamplesJoinDBMachine(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSamplesJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSamplesJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrums() If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrums(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrums(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrums(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumsJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumsJoinDBSpectrumType(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumsJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBWishlists() If this collection has already been initialized, returns the collection.
java.util.List	getDBWishlists(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBWishlists(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBWishlists(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBWishlistsJoinDBMolecule(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBWishlistsJoinDBSpectrumType(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBWishlistsJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
static java.util.List	getFieldNames() Generate a list of field names.
long	getFp0() Get the Fp0
long	getFp1() Get the Fp1
long	getFp10() Get the Fp10
long	getFp11() Get the Fp11
long	getFp12() Get the Fp12
long	getFp13() Get the Fp13
long	getFp14() Get the Fp14
long	getFp15() Get the Fp15
long	getFp2() Get the Fp2
long	getFp3() Get the Fp3
long	getFp4() Get the Fp4
long	getFp5() Get the Fp5
long	getFp6() Get the Fp6
long	getFp7() Get the Fp7
long	getFp8() Get the Fp8
long	getFp9() Get the Fp9
double	getMolecularWeight() Get the MolecularWeight
int	getMoleculeId() Get the MoleculeId
NmrshiftdbUser	getNmrshiftdbUser() Get the associated NmrshiftdbUser object
DBMoleculePeer	getPeer() returns a peer instance associated with this om.
org.apache.torque.om.ObjectKey	getPrimaryKey() returns an id that differentiates this object from others of its class.
int	getSar() Get the Sar
byte[]	getSmilesString() Get the SmilesString
byte[]	getSmilesStringChiral() Get the SmilesStringChiral
int	getSssr() Get the Sssr
int	getUserId() Get the UserId
protected void	initDBAtoms() Temporary storage of collDBAtoms to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBBookmarks() Temporary storage of collDBBookmarks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBCanonicalNames() Temporary storage of collDBCanonicalNames to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBChemicalNames() Temporary storage of collDBChemicalNames to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBMoleculeDBKeywords() Temporary storage of collDBMoleculeDBKeywords to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBMoleculeHyperlinks() Temporary storage of collDBMoleculeHyperlinks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBSamples() Temporary storage of collDBSamples to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBSpectrums() Temporary storage of collDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBWishlists() Temporary storage of collDBWishlists to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
void	save() Stores the object in the database.
void	save(java.sql.Connection con) Stores the object in the database.
void	save(java.lang.String dbName) Stores the object in the database.
void	setCasNumber(java.lang.String v) Set the value of CasNumber
void	setComment(byte[] v) Set the value of Comment
void	setDate(java.util.Date v) Set the value of Date
void	setDbe(double v) Set the value of Dbe
void	setFp0(long v) Set the value of Fp0
void	setFp1(long v) Set the value of Fp1
void	setFp10(long v) Set the value of Fp10
void	setFp11(long v) Set the value of Fp11
void	setFp12(long v) Set the value of Fp12
void	setFp13(long v) Set the value of Fp13
void	setFp14(long v) Set the value of Fp14
void	setFp15(long v) Set the value of Fp15
void	setFp2(long v) Set the value of Fp2
void	setFp3(long v) Set the value of Fp3
void	setFp4(long v) Set the value of Fp4
void	setFp5(long v) Set the value of Fp5
void	setFp6(long v) Set the value of Fp6
void	setFp7(long v) Set the value of Fp7
void	setFp8(long v) Set the value of Fp8
void	setFp9(long v) Set the value of Fp9
void	setMolecularWeight(double v) Set the value of MolecularWeight
void	setMoleculeId(int v) Set the value of MoleculeId
void	setNmrshiftdbUser(NmrshiftdbUser v) Declares an association between this object and a NmrshiftdbUser object
void	setNmrshiftdbUserKey(org.apache.torque.om.ObjectKey key) Provides convenient way to set a relationship based on a ObjectKey.
void	setPrimaryKey(org.apache.torque.om.ObjectKey key) Set the PrimaryKey using ObjectKey.
void	setPrimaryKey(java.lang.String key) Set the PrimaryKey using a String.
void	setSar(int v) Set the value of Sar
void	setSmilesString(byte[] v) Set the value of SmilesString
void	setSmilesStringChiral(byte[] v) Set the value of SmilesStringChiral
void	setSssr(int v) Set the value of Sssr
void	setUserId(int v) Set the value of UserId
java.lang.String	toString()

Methods inherited from class org.apache.torque.om.BaseObject

equals, equals, getLog, hashCode, isModified, isNew, log, resetModified, setModified, setNew, setPrimaryKey

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

peer

private static final DBMoleculePeer peer

The Peer class

moleculeId

private int moleculeId

The value for the moleculeId field

date

private java.util.Date date

The value for the date field

casNumber

private java.lang.String casNumber

The value for the casNumber field

molecularWeight

private double molecularWeight

The value for the molecularWeight field

smilesString

private byte[] smilesString

The value for the smilesString field

smilesStringChiral

private byte[] smilesStringChiral

The value for the smilesStringChiral field

userId

private int userId

The value for the userId field

fp0

private long fp0

The value for the fp0 field

fp1

private long fp1

The value for the fp1 field

fp2

private long fp2

The value for the fp2 field

fp3

private long fp3

The value for the fp3 field

fp4

private long fp4

The value for the fp4 field

fp5

private long fp5

The value for the fp5 field

fp6

private long fp6

The value for the fp6 field

fp7

private long fp7

The value for the fp7 field

fp8

private long fp8

The value for the fp8 field

fp9

private long fp9

The value for the fp9 field

fp10

private long fp10

The value for the fp10 field

fp11

private long fp11

The value for the fp11 field

fp12

private long fp12

The value for the fp12 field

fp13

private long fp13

The value for the fp13 field

fp14

private long fp14

The value for the fp14 field

fp15

private long fp15

The value for the fp15 field

dbe

private double dbe

The value for the dbe field

sssr

private int sssr

The value for the sssr field

sar

private int sar

The value for the sar field

comment

private byte[] comment

The value for the comment field

aNmrshiftdbUser

private NmrshiftdbUser aNmrshiftdbUser

collDBBookmarks

protected java.util.List collDBBookmarks

Collection to store aggregation of collDBBookmarks

lastDBBookmarksCriteria

private org.apache.torque.util.Criteria lastDBBookmarksCriteria

The criteria used to select the current contents of collDBBookmarks

collDBCanonicalNames

protected java.util.List collDBCanonicalNames

Collection to store aggregation of collDBCanonicalNames

lastDBCanonicalNamesCriteria

private org.apache.torque.util.Criteria lastDBCanonicalNamesCriteria

The criteria used to select the current contents of collDBCanonicalNames

collDBWishlists

protected java.util.List collDBWishlists

Collection to store aggregation of collDBWishlists

lastDBWishlistsCriteria

private org.apache.torque.util.Criteria lastDBWishlistsCriteria

The criteria used to select the current contents of collDBWishlists

collDBSpectrums

protected java.util.List collDBSpectrums

Collection to store aggregation of collDBSpectrums

lastDBSpectrumsCriteria

private org.apache.torque.util.Criteria lastDBSpectrumsCriteria

The criteria used to select the current contents of collDBSpectrums

collDBAtoms

protected java.util.List collDBAtoms

Collection to store aggregation of collDBAtoms

lastDBAtomsCriteria

private org.apache.torque.util.Criteria lastDBAtomsCriteria

The criteria used to select the current contents of collDBAtoms

collDBChemicalNames

protected java.util.List collDBChemicalNames

Collection to store aggregation of collDBChemicalNames

lastDBChemicalNamesCriteria

private org.apache.torque.util.Criteria lastDBChemicalNamesCriteria

The criteria used to select the current contents of collDBChemicalNames

collDBMoleculeHyperlinks

protected java.util.List collDBMoleculeHyperlinks

Collection to store aggregation of collDBMoleculeHyperlinks

lastDBMoleculeHyperlinksCriteria

private org.apache.torque.util.Criteria lastDBMoleculeHyperlinksCriteria

The criteria used to select the current contents of collDBMoleculeHyperlinks

collDBMoleculeDBKeywords

protected java.util.List collDBMoleculeDBKeywords

Collection to store aggregation of collDBMoleculeDBKeywords

lastDBMoleculeDBKeywordsCriteria

private org.apache.torque.util.Criteria lastDBMoleculeDBKeywordsCriteria

The criteria used to select the current contents of collDBMoleculeDBKeywords

collDBSamples

protected java.util.List collDBSamples

Collection to store aggregation of collDBSamples

lastDBSamplesCriteria

private org.apache.torque.util.Criteria lastDBSamplesCriteria

The criteria used to select the current contents of collDBSamples

fieldNames

private static java.util.List fieldNames

alreadyInSave

private boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Constructor Detail

BaseDBMolecule

public BaseDBMolecule()

Method Detail

getMoleculeId

public int getMoleculeId()

Get the MoleculeId

Returns:

int

setMoleculeId

public void setMoleculeId(int v)
                   throws org.apache.torque.TorqueException

Set the value of MoleculeId

Parameters:

v - new value

Throws:

org.apache.torque.TorqueException

getDate

public java.util.Date getDate()

Get the Date

Returns:

Date

setDate

public void setDate(java.util.Date v)

Set the value of Date

Parameters:

v - new value

getCasNumber

public java.lang.String getCasNumber()

Get the CasNumber

Returns:

String

setCasNumber

public void setCasNumber(java.lang.String v)

Set the value of CasNumber

Parameters:

v - new value

getMolecularWeight

public double getMolecularWeight()

Get the MolecularWeight

Returns:

double

setMolecularWeight

public void setMolecularWeight(double v)

Set the value of MolecularWeight

Parameters:

v - new value

getSmilesString

public byte[] getSmilesString()

Get the SmilesString

Returns:

byte[]

setSmilesString

public void setSmilesString(byte[] v)

Set the value of SmilesString

Parameters:

v - new value

getSmilesStringChiral

public byte[] getSmilesStringChiral()

Get the SmilesStringChiral

Returns:

byte[]

setSmilesStringChiral

public void setSmilesStringChiral(byte[] v)

Set the value of SmilesStringChiral

Parameters:

v - new value

getUserId

public int getUserId()

Get the UserId

Returns:

int

setUserId

public void setUserId(int v)
               throws org.apache.torque.TorqueException

Set the value of UserId

Parameters:

v - new value

Throws:

org.apache.torque.TorqueException

getFp0

public long getFp0()

Get the Fp0

Returns:

long

setFp0

public void setFp0(long v)

Set the value of Fp0

Parameters:

v - new value

getFp1

public long getFp1()

Get the Fp1

Returns:

long

setFp1

public void setFp1(long v)

Set the value of Fp1

Parameters:

v - new value

getFp2

public long getFp2()

Get the Fp2

Returns:

long

setFp2

public void setFp2(long v)

Set the value of Fp2

Parameters:

v - new value

getFp3

public long getFp3()

Get the Fp3

Returns:

long

setFp3

public void setFp3(long v)

Set the value of Fp3

Parameters:

v - new value

getFp4

public long getFp4()

Get the Fp4

Returns:

long

setFp4

public void setFp4(long v)

Set the value of Fp4

Parameters:

v - new value

getFp5

public long getFp5()

Get the Fp5

Returns:

long

setFp5

public void setFp5(long v)

Set the value of Fp5

Parameters:

v - new value

getFp6

public long getFp6()

Get the Fp6

Returns:

long

setFp6

public void setFp6(long v)

Set the value of Fp6

Parameters:

v - new value

getFp7

public long getFp7()

Get the Fp7

Returns:

long

setFp7

public void setFp7(long v)

Set the value of Fp7

Parameters:

v - new value

getFp8

public long getFp8()

Get the Fp8

Returns:

long

setFp8

public void setFp8(long v)

Set the value of Fp8

Parameters:

v - new value

getFp9

public long getFp9()

Get the Fp9

Returns:

long

setFp9

public void setFp9(long v)

Set the value of Fp9

Parameters:

v - new value

getFp10

public long getFp10()

Get the Fp10

Returns:

long

setFp10

public void setFp10(long v)

Set the value of Fp10

Parameters:

v - new value

getFp11

public long getFp11()

Get the Fp11

Returns:

long

setFp11

public void setFp11(long v)

Set the value of Fp11

Parameters:

v - new value

getFp12

public long getFp12()

Get the Fp12

Returns:

long

setFp12

public void setFp12(long v)

Set the value of Fp12

Parameters:

v - new value

getFp13

public long getFp13()

Get the Fp13

Returns:

long

setFp13

public void setFp13(long v)

Set the value of Fp13

Parameters:

v - new value

getFp14

public long getFp14()

Get the Fp14

Returns:

long

setFp14

public void setFp14(long v)

Set the value of Fp14

Parameters:

v - new value

getFp15

public long getFp15()

Get the Fp15

Returns:

long

setFp15

public void setFp15(long v)

Set the value of Fp15

Parameters:

v - new value

getDbe

public double getDbe()

Get the Dbe

Returns:

double

setDbe

public void setDbe(double v)

Set the value of Dbe

Parameters:

v - new value

getSssr

public int getSssr()

Get the Sssr

Returns:

int

setSssr

public void setSssr(int v)

Set the value of Sssr

Parameters:

v - new value

getSar

public int getSar()

Get the Sar

Returns:

int

setSar

public void setSar(int v)

Set the value of Sar

Parameters:

v - new value

getComment

public byte[] getComment()

Get the Comment

Returns:

byte[]

setComment

public void setComment(byte[] v)

Set the value of Comment

Parameters:

v - new value

setNmrshiftdbUser

public void setNmrshiftdbUser(NmrshiftdbUser v)
                       throws org.apache.torque.TorqueException

Declares an association between this object and a NmrshiftdbUser object

Parameters:

v - NmrshiftdbUser

Throws:

org.apache.torque.TorqueException

getNmrshiftdbUser

public NmrshiftdbUser getNmrshiftdbUser()
                                 throws org.apache.torque.TorqueException

Get the associated NmrshiftdbUser object

Returns:

the associated NmrshiftdbUser object

Throws:

org.apache.torque.TorqueException

setNmrshiftdbUserKey

public void setNmrshiftdbUserKey(org.apache.torque.om.ObjectKey key)
                          throws org.apache.torque.TorqueException

Provides convenient way to set a relationship based on a ObjectKey. e.g. bar.setFooKey(foo.getPrimaryKey())

Throws:

org.apache.torque.TorqueException

initDBBookmarks

protected void initDBBookmarks()

Temporary storage of collDBBookmarks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBBookmark

public void addDBBookmark(DBBookmark l)
                   throws org.apache.torque.TorqueException

Method called to associate a DBBookmark object to this object through the DBBookmark foreign key attribute

Parameters:

l - DBBookmark

Throws:

org.apache.torque.TorqueException

getDBBookmarks

public java.util.List getDBBookmarks()
                              throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBBookmarks(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBBookmarks

public java.util.List getDBBookmarks(org.apache.torque.util.Criteria criteria)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBBookmarks from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBBookmarks

public java.util.List getDBBookmarks(java.sql.Connection con)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBBookmarks(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBBookmarks

public java.util.List getDBBookmarks(org.apache.torque.util.Criteria criteria,
                                     java.sql.Connection con)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBBookmarks from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBBookmarksJoinDBMolecule

protected java.util.List getDBBookmarksJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                               throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBBookmarks from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBBookmarksJoinNmrshiftdbUser

protected java.util.List getDBBookmarksJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria)
                                                   throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBBookmarks from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

initDBCanonicalNames

protected void initDBCanonicalNames()

Temporary storage of collDBCanonicalNames to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBCanonicalName

public void addDBCanonicalName(DBCanonicalName l)
                        throws org.apache.torque.TorqueException

Method called to associate a DBCanonicalName object to this object through the DBCanonicalName foreign key attribute

Parameters:

l - DBCanonicalName

Throws:

org.apache.torque.TorqueException

getDBCanonicalNames

public java.util.List getDBCanonicalNames()
                                   throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBCanonicalNames(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBCanonicalNames

public java.util.List getDBCanonicalNames(org.apache.torque.util.Criteria criteria)
                                   throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBCanonicalNames from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBCanonicalNames

public java.util.List getDBCanonicalNames(java.sql.Connection con)
                                   throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBCanonicalNames(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBCanonicalNames

public java.util.List getDBCanonicalNames(org.apache.torque.util.Criteria criteria,
                                          java.sql.Connection con)
                                   throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBCanonicalNames from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBCanonicalNamesJoinDBMolecule

protected java.util.List getDBCanonicalNamesJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                                    throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBCanonicalNames from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBCanonicalNamesJoinDBCanonicalNameType

protected java.util.List getDBCanonicalNamesJoinDBCanonicalNameType(org.apache.torque.util.Criteria criteria)
                                                             throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBCanonicalNames from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

initDBWishlists

protected void initDBWishlists()

Temporary storage of collDBWishlists to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBWishlist

public void addDBWishlist(DBWishlist l)
                   throws org.apache.torque.TorqueException

Method called to associate a DBWishlist object to this object through the DBWishlist foreign key attribute

Parameters:

l - DBWishlist

Throws:

org.apache.torque.TorqueException

getDBWishlists

public java.util.List getDBWishlists()
                              throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBWishlists(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBWishlists

public java.util.List getDBWishlists(org.apache.torque.util.Criteria criteria)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBWishlists from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBWishlists

public java.util.List getDBWishlists(java.sql.Connection con)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBWishlists(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBWishlists

public java.util.List getDBWishlists(org.apache.torque.util.Criteria criteria,
                                     java.sql.Connection con)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBWishlists from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBWishlistsJoinDBSpectrumType

protected java.util.List getDBWishlistsJoinDBSpectrumType(org.apache.torque.util.Criteria criteria)
                                                   throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBWishlists from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBWishlistsJoinNmrshiftdbUser

protected java.util.List getDBWishlistsJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria)
                                                   throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBWishlists from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBWishlistsJoinDBMolecule

protected java.util.List getDBWishlistsJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                               throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBWishlists from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

initDBSpectrums

protected void initDBSpectrums()

Temporary storage of collDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBSpectrum

public void addDBSpectrum(DBSpectrum l)
                   throws org.apache.torque.TorqueException

Method called to associate a DBSpectrum object to this object through the DBSpectrum foreign key attribute

Parameters:

l - DBSpectrum

Throws:

org.apache.torque.TorqueException

getDBSpectrums

public java.util.List getDBSpectrums()
                              throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrums(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBSpectrums

public java.util.List getDBSpectrums(org.apache.torque.util.Criteria criteria)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBSpectrums from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBSpectrums

public java.util.List getDBSpectrums(java.sql.Connection con)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrums(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrums

public java.util.List getDBSpectrums(org.apache.torque.util.Criteria criteria,
                                     java.sql.Connection con)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBSpectrums from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumsJoinNmrshiftdbUser

protected java.util.List getDBSpectrumsJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria)
                                                   throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBSpectrums from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBSpectrumsJoinDBSpectrumType

protected java.util.List getDBSpectrumsJoinDBSpectrumType(org.apache.torque.util.Criteria criteria)
                                                   throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBSpectrums from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBSpectrumsJoinDBMolecule

protected java.util.List getDBSpectrumsJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                               throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBSpectrums from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

initDBAtoms

protected void initDBAtoms()

Temporary storage of collDBAtoms to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBAtom

public void addDBAtom(DBAtom l)
               throws org.apache.torque.TorqueException

Method called to associate a DBAtom object to this object through the DBAtom foreign key attribute

Parameters:

l - DBAtom

Throws:

org.apache.torque.TorqueException

getDBAtoms

public java.util.List getDBAtoms()
                          throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBAtoms(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBAtoms

public java.util.List getDBAtoms(org.apache.torque.util.Criteria criteria)
                          throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBAtoms from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBAtoms

public java.util.List getDBAtoms(java.sql.Connection con)
                          throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBAtoms(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBAtoms

public java.util.List getDBAtoms(org.apache.torque.util.Criteria criteria,
                                 java.sql.Connection con)
                          throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBAtoms from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBAtomsJoinDBMolecule

protected java.util.List getDBAtomsJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                           throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBAtoms from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

initDBChemicalNames

protected void initDBChemicalNames()

Temporary storage of collDBChemicalNames to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBChemicalName

public void addDBChemicalName(DBChemicalName l)
                       throws org.apache.torque.TorqueException

Method called to associate a DBChemicalName object to this object through the DBChemicalName foreign key attribute

Parameters:

l - DBChemicalName

Throws:

org.apache.torque.TorqueException

getDBChemicalNames

public java.util.List getDBChemicalNames()
                                  throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBChemicalNames(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBChemicalNames

public java.util.List getDBChemicalNames(org.apache.torque.util.Criteria criteria)
                                  throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBChemicalNames from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBChemicalNames

public java.util.List getDBChemicalNames(java.sql.Connection con)
                                  throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBChemicalNames(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBChemicalNames

public java.util.List getDBChemicalNames(org.apache.torque.util.Criteria criteria,
                                         java.sql.Connection con)
                                  throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBChemicalNames from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBChemicalNamesJoinDBMolecule

protected java.util.List getDBChemicalNamesJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                                   throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBChemicalNames from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

initDBMoleculeHyperlinks

protected void initDBMoleculeHyperlinks()

Temporary storage of collDBMoleculeHyperlinks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBMoleculeHyperlink

public void addDBMoleculeHyperlink(DBMoleculeHyperlink l)
                            throws org.apache.torque.TorqueException

Method called to associate a DBMoleculeHyperlink object to this object through the DBMoleculeHyperlink foreign key attribute

Parameters:

l - DBMoleculeHyperlink

Throws:

org.apache.torque.TorqueException

getDBMoleculeHyperlinks

public java.util.List getDBMoleculeHyperlinks()
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBMoleculeHyperlinks(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBMoleculeHyperlinks

public java.util.List getDBMoleculeHyperlinks(org.apache.torque.util.Criteria criteria)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBMoleculeHyperlinks from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBMoleculeHyperlinks

public java.util.List getDBMoleculeHyperlinks(java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBMoleculeHyperlinks(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBMoleculeHyperlinks

public java.util.List getDBMoleculeHyperlinks(org.apache.torque.util.Criteria criteria,
                                              java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBMoleculeHyperlinks from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBMoleculeHyperlinksJoinDBMolecule

protected java.util.List getDBMoleculeHyperlinksJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBMoleculeHyperlinks from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

initDBMoleculeDBKeywords

protected void initDBMoleculeDBKeywords()

Temporary storage of collDBMoleculeDBKeywords to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBMoleculeDBKeyword

public void addDBMoleculeDBKeyword(DBMoleculeDBKeyword l)
                            throws org.apache.torque.TorqueException

Method called to associate a DBMoleculeDBKeyword object to this object through the DBMoleculeDBKeyword foreign key attribute

Parameters:

l - DBMoleculeDBKeyword

Throws:

org.apache.torque.TorqueException

getDBMoleculeDBKeywords

public java.util.List getDBMoleculeDBKeywords()
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBMoleculeDBKeywords(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBMoleculeDBKeywords

public java.util.List getDBMoleculeDBKeywords(org.apache.torque.util.Criteria criteria)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBMoleculeDBKeywords from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBMoleculeDBKeywords

public java.util.List getDBMoleculeDBKeywords(java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBMoleculeDBKeywords(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBMoleculeDBKeywords

public java.util.List getDBMoleculeDBKeywords(org.apache.torque.util.Criteria criteria,
                                              java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBMoleculeDBKeywords from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBMoleculeDBKeywordsJoinDBMolecule

protected java.util.List getDBMoleculeDBKeywordsJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBMoleculeDBKeywords from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBMoleculeDBKeywordsJoinDBKeyword

protected java.util.List getDBMoleculeDBKeywordsJoinDBKeyword(org.apache.torque.util.Criteria criteria)
                                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBMoleculeDBKeywords from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

initDBSamples

protected void initDBSamples()

Temporary storage of collDBSamples to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBSample

public void addDBSample(DBSample l)
                 throws org.apache.torque.TorqueException

Method called to associate a DBSample object to this object through the DBSample foreign key attribute

Parameters:

l - DBSample

Throws:

org.apache.torque.TorqueException

getDBSamples

public java.util.List getDBSamples()
                            throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSamples(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBSamples

public java.util.List getDBSamples(org.apache.torque.util.Criteria criteria)
                            throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBSamples from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBSamples

public java.util.List getDBSamples(java.sql.Connection con)
                            throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSamples(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSamples

public java.util.List getDBSamples(org.apache.torque.util.Criteria criteria,
                                   java.sql.Connection con)
                            throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule has previously been saved, it will retrieve related DBSamples from storage. If this DBMolecule is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSamplesJoinNmrshiftdbUser

protected java.util.List getDBSamplesJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria)
                                                 throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBSamples from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBSamplesJoinDBCondition

protected java.util.List getDBSamplesJoinDBCondition(org.apache.torque.util.Criteria criteria)
                                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBSamples from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBSamplesJoinDBMachine

protected java.util.List getDBSamplesJoinDBMachine(org.apache.torque.util.Criteria criteria)
                                            throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBSamples from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getDBSamplesJoinDBMolecule

protected java.util.List getDBSamplesJoinDBMolecule(org.apache.torque.util.Criteria criteria)
                                             throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBMolecule is new, it will return an empty collection; or if this DBMolecule has previously been saved, it will retrieve related DBSamples from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBMolecule.

Throws:

org.apache.torque.TorqueException

getFieldNames

public static java.util.List getFieldNames()

Generate a list of field names.

Returns:

a list of field names

getByName

public java.lang.Object getByName(java.lang.String name)

Retrieves a field from the object by name passed in as a String.

Overrides:

getByName in class org.apache.torque.om.BaseObject

Parameters:

name - field name

Returns:

value

getByPeerName

public java.lang.Object getByPeerName(java.lang.String name)

Retrieves a field from the object by name passed in as a String. The String must be one of the static Strings defined in this Class' Peer.

Overrides:

getByPeerName in class org.apache.torque.om.BaseObject

Parameters:

name - peer name

Returns:

value

getByPosition

public java.lang.Object getByPosition(int pos)

Retrieves a field from the object by Position as specified in the xml schema. Zero-based.

Overrides:

getByPosition in class org.apache.torque.om.BaseObject

Parameters:

pos - position in xml schema

Returns:

value

save

public void save()
          throws java.lang.Exception

Stores the object in the database. If the object is new, it inserts it; otherwise an update is performed.

Specified by:

save in interface org.apache.torque.om.Persistent

Specified by:

save in class org.apache.torque.om.BaseObject

Throws:

java.lang.Exception

save

public void save(java.lang.String dbName)
          throws org.apache.torque.TorqueException

Stores the object in the database. If the object is new, it inserts it; otherwise an update is performed. Note: this code is here because the method body is auto-generated conditionally and therefore needs to be in this file instead of in the super class, BaseObject.

Specified by:

save in interface org.apache.torque.om.Persistent

Specified by:

save in class org.apache.torque.om.BaseObject

Parameters:

dbName -

Throws:

org.apache.torque.TorqueException

save

public void save(java.sql.Connection con)
          throws org.apache.torque.TorqueException

Stores the object in the database. If the object is new, it inserts it; otherwise an update is performed. This method is meant to be used as part of a transaction, otherwise use the save() method and the connection details will be handled internally

Specified by:

save in interface org.apache.torque.om.Persistent

Specified by:

save in class org.apache.torque.om.BaseObject

Parameters:

con -

Throws:

org.apache.torque.TorqueException

setPrimaryKey

public void setPrimaryKey(org.apache.torque.om.ObjectKey key)
                   throws org.apache.torque.TorqueException

Set the PrimaryKey using ObjectKey.

Specified by:

setPrimaryKey in interface org.apache.torque.om.Persistent

Overrides:

setPrimaryKey in class org.apache.torque.om.BaseObject

Parameters:

moleculeId - ObjectKey

Throws:

org.apache.torque.TorqueException

setPrimaryKey

public void setPrimaryKey(java.lang.String key)
                   throws org.apache.torque.TorqueException

Set the PrimaryKey using a String.

Specified by:

setPrimaryKey in interface org.apache.torque.om.Persistent

Overrides:

setPrimaryKey in class org.apache.torque.om.BaseObject

Parameters:

key -

Throws:

org.apache.torque.TorqueException

getPrimaryKey

public org.apache.torque.om.ObjectKey getPrimaryKey()

returns an id that differentiates this object from others of its class.

Specified by:

getPrimaryKey in interface org.apache.torque.om.Persistent

Overrides:

getPrimaryKey in class org.apache.torque.om.BaseObject

copy

public DBMolecule copy()
                throws org.apache.torque.TorqueException

Makes a copy of this object. It creates a new object filling in the simple attributes. It then fills all the association collections and sets the related objects to isNew=true.

Throws:

org.apache.torque.TorqueException

copyInto

protected DBMolecule copyInto(DBMolecule copyObj)
                       throws org.apache.torque.TorqueException

Throws:

org.apache.torque.TorqueException

getPeer

public DBMoleculePeer getPeer()

returns a peer instance associated with this om. Since Peer classes are not to have any instance attributes, this method returns the same instance for all member of this class. The method could therefore be static, but this would prevent one from overriding the behavior.

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object