org.openscience.nmrshiftdb.om
Class BaseDBSpectrum

java.lang.Object
  org.apache.torque.om.BaseObject
      org.openscience.nmrshiftdb.om.BaseDBSpectrum

All Implemented Interfaces:

java.io.Serializable, org.apache.torque.om.Persistent

Direct Known Subclasses:

DBSpectrum

public abstract class BaseDBSpectrum
extends org.apache.torque.om.BaseObject

This class was autogenerated by Torque on: [Mon Dec 01 12:28:17 GMT 2008] You should not use this class directly. It should not even be extended all references should be to DBSpectrum

See Also:

Serialized Form

Field Summary

private DBMolecule	aDBMolecule
private DBSpectrumType	aDBSpectrumType
private boolean	alreadyInSave flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
private NmrshiftdbUser	aNmrshiftdbUser
protected java.util.List	collDBCouplings Collection to store aggregation of collDBCouplings
protected java.util.List	collDBRawFileDBSpectrums Collection to store aggregation of collDBRawFileDBSpectrums
protected java.util.List	collDBSignals Collection to store aggregation of collDBSignals
protected java.util.List	collDBSpectrumDBConditions Collection to store aggregation of collDBSpectrumDBConditions
protected java.util.List	collDBSpectrumDBKeywords Collection to store aggregation of collDBSpectrumDBKeywords
protected java.util.List	collDBSpectrumDBLiteratures Collection to store aggregation of collDBSpectrumDBLiteratures
protected java.util.List	collDBSpectrumHyperlinks Collection to store aggregation of collDBSpectrumHyperlinks
protected java.util.List	collDBUserDBSpectrumEdits Collection to store aggregation of collDBUserDBSpectrumEdits
protected java.util.List	collDBUserDBSpectrumMarks Collection to store aggregation of collDBUserDBSpectrumMarks
protected java.util.List	collDBUserDBSpectrums Collection to store aggregation of collDBUserDBSpectrums
private byte[]	comment The value for the comment field
private java.lang.String	commentSoundex The value for the commentSoundex field
private java.util.Date	date The value for the date field
private static java.util.List	fieldNames
private long	fingerprint The value for the fingerprint field
private org.apache.torque.util.Criteria	lastDBCouplingsCriteria The criteria used to select the current contents of collDBCouplings
private org.apache.torque.util.Criteria	lastDBRawFileDBSpectrumsCriteria The criteria used to select the current contents of collDBRawFileDBSpectrums
private org.apache.torque.util.Criteria	lastDBSignalsCriteria The criteria used to select the current contents of collDBSignals
private org.apache.torque.util.Criteria	lastDBSpectrumDBConditionsCriteria The criteria used to select the current contents of collDBSpectrumDBConditions
private org.apache.torque.util.Criteria	lastDBSpectrumDBKeywordsCriteria The criteria used to select the current contents of collDBSpectrumDBKeywords
private org.apache.torque.util.Criteria	lastDBSpectrumDBLiteraturesCriteria The criteria used to select the current contents of collDBSpectrumDBLiteratures
private org.apache.torque.util.Criteria	lastDBSpectrumHyperlinksCriteria The criteria used to select the current contents of collDBSpectrumHyperlinks
private org.apache.torque.util.Criteria	lastDBUserDBSpectrumEditsCriteria The criteria used to select the current contents of collDBUserDBSpectrumEdits
private org.apache.torque.util.Criteria	lastDBUserDBSpectrumMarksCriteria The criteria used to select the current contents of collDBUserDBSpectrumMarks
private org.apache.torque.util.Criteria	lastDBUserDBSpectrumsCriteria The criteria used to select the current contents of collDBUserDBSpectrums
private java.lang.String	literature The value for the literature field
private java.lang.String	literatureSoundex The value for the literatureSoundex field
private int	moleculeId The value for the moleculeId field
private static DBSpectrumPeer	peer The Peer class
private java.lang.String	reviewFlag The value for the reviewFlag field
private java.lang.String	reviewKey The value for the reviewKey field
private java.lang.String	simpleSpecfile The value for the simpleSpecfile field
private java.lang.String	specfile The value for the specfile field
private int	spectrumId The value for the spectrumId field
private int	spectrumTypeId The value for the spectrumTypeId field
private int	userId The value for the userId field

Fields inherited from class org.apache.torque.om.BaseObject

NEW_ID

Constructor Summary

BaseDBSpectrum()

Method Summary

void	addDBCoupling(DBCoupling l) Method called to associate a DBCoupling object to this object through the DBCoupling foreign key attribute
void	addDBRawFileDBSpectrum(DBRawFileDBSpectrum l) Method called to associate a DBRawFileDBSpectrum object to this object through the DBRawFileDBSpectrum foreign key attribute
void	addDBSignal(DBSignal l) Method called to associate a DBSignal object to this object through the DBSignal foreign key attribute
void	addDBSpectrumDBCondition(DBSpectrumDBCondition l) Method called to associate a DBSpectrumDBCondition object to this object through the DBSpectrumDBCondition foreign key attribute
void	addDBSpectrumDBKeyword(DBSpectrumDBKeyword l) Method called to associate a DBSpectrumDBKeyword object to this object through the DBSpectrumDBKeyword foreign key attribute
void	addDBSpectrumDBLiterature(DBSpectrumDBLiterature l) Method called to associate a DBSpectrumDBLiterature object to this object through the DBSpectrumDBLiterature foreign key attribute
void	addDBSpectrumHyperlink(DBSpectrumHyperlink l) Method called to associate a DBSpectrumHyperlink object to this object through the DBSpectrumHyperlink foreign key attribute
void	addDBUserDBSpectrum(DBUserDBSpectrum l) Method called to associate a DBUserDBSpectrum object to this object through the DBUserDBSpectrum foreign key attribute
void	addDBUserDBSpectrumEdit(DBUserDBSpectrumEdit l) Method called to associate a DBUserDBSpectrumEdit object to this object through the DBUserDBSpectrumEdit foreign key attribute
void	addDBUserDBSpectrumMark(DBUserDBSpectrumMark l) Method called to associate a DBUserDBSpectrumMark object to this object through the DBUserDBSpectrumMark foreign key attribute
DBSpectrum	copy() Makes a copy of this object.
protected DBSpectrum	copyInto(DBSpectrum copyObj)
java.lang.Object	getByName(java.lang.String name) Retrieves a field from the object by name passed in as a String.
java.lang.Object	getByPeerName(java.lang.String name) Retrieves a field from the object by name passed in as a String.
java.lang.Object	getByPosition(int pos) Retrieves a field from the object by Position as specified in the xml schema.
byte[]	getComment() Get the Comment
java.lang.String	getCommentSoundex() Get the CommentSoundex
java.util.Date	getDate() Get the Date
java.util.List	getDBCouplings() If this collection has already been initialized, returns the collection.
java.util.List	getDBCouplings(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBCouplings(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBCouplings(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBCouplingsJoinDBAtomRelatedByAtomId1(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBCouplingsJoinDBAtomRelatedByAtomId2(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBCouplingsJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
DBMolecule	getDBMolecule() Get the associated DBMolecule object
java.util.List	getDBRawFileDBSpectrums() If this collection has already been initialized, returns the collection.
java.util.List	getDBRawFileDBSpectrums(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBRawFileDBSpectrums(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBRawFileDBSpectrums(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBRawFileDBSpectrumsJoinDBRawFile(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBRawFileDBSpectrumsJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSignals() If this collection has already been initialized, returns the collection.
java.util.List	getDBSignals(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBSignals(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSignals(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSignalsJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrumDBConditions() If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrumDBConditions(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrumDBConditions(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrumDBConditions(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumDBConditionsJoinDBCondition(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumDBConditionsJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrumDBKeywords() If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrumDBKeywords(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrumDBKeywords(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrumDBKeywords(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumDBKeywordsJoinDBKeyword(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumDBKeywordsJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrumDBLiteratures() If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrumDBLiteratures(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrumDBLiteratures(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrumDBLiteratures(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumDBLiteraturesJoinDBLiterature(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumDBLiteraturesJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrumHyperlinks() If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrumHyperlinks(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBSpectrumHyperlinks(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBSpectrumHyperlinks(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBSpectrumHyperlinksJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
DBSpectrumType	getDBSpectrumType() Get the associated DBSpectrumType object
java.util.List	getDBUserDBSpectrumEdits() If this collection has already been initialized, returns the collection.
java.util.List	getDBUserDBSpectrumEdits(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBUserDBSpectrumEdits(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBUserDBSpectrumEdits(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBUserDBSpectrumEditsJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBUserDBSpectrumEditsJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBUserDBSpectrumMarks() If this collection has already been initialized, returns the collection.
java.util.List	getDBUserDBSpectrumMarks(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBUserDBSpectrumMarks(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBUserDBSpectrumMarks(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBUserDBSpectrumMarksJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBUserDBSpectrumMarksJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBUserDBSpectrums() If this collection has already been initialized, returns the collection.
java.util.List	getDBUserDBSpectrums(java.sql.Connection con) If this collection has already been initialized, returns the collection.
java.util.List	getDBUserDBSpectrums(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
java.util.List	getDBUserDBSpectrums(org.apache.torque.util.Criteria criteria, java.sql.Connection con) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBUserDBSpectrumsJoinDBSpectrum(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
protected java.util.List	getDBUserDBSpectrumsJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria) If this collection has already been initialized with an identical criteria, it returns the collection.
static java.util.List	getFieldNames() Generate a list of field names.
long	getFingerprint() Get the Fingerprint
java.lang.String	getLiterature() Get the Literature
java.lang.String	getLiteratureSoundex() Get the LiteratureSoundex
int	getMoleculeId() Get the MoleculeId
NmrshiftdbUser	getNmrshiftdbUser() Get the associated NmrshiftdbUser object
DBSpectrumPeer	getPeer() returns a peer instance associated with this om.
org.apache.torque.om.ObjectKey	getPrimaryKey() returns an id that differentiates this object from others of its class.
java.lang.String	getReviewFlag() Get the ReviewFlag
java.lang.String	getReviewKey() Get the ReviewKey
java.lang.String	getSimpleSpecfile() Get the SimpleSpecfile
java.lang.String	getSpecfile() Get the Specfile
int	getSpectrumId() Get the SpectrumId
int	getSpectrumTypeId() Get the SpectrumTypeId
int	getUserId() Get the UserId
protected void	initDBCouplings() Temporary storage of collDBCouplings to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBRawFileDBSpectrums() Temporary storage of collDBRawFileDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBSignals() Temporary storage of collDBSignals to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBSpectrumDBConditions() Temporary storage of collDBSpectrumDBConditions to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBSpectrumDBKeywords() Temporary storage of collDBSpectrumDBKeywords to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBSpectrumDBLiteratures() Temporary storage of collDBSpectrumDBLiteratures to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBSpectrumHyperlinks() Temporary storage of collDBSpectrumHyperlinks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBUserDBSpectrumEdits() Temporary storage of collDBUserDBSpectrumEdits to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBUserDBSpectrumMarks() Temporary storage of collDBUserDBSpectrumMarks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
protected void	initDBUserDBSpectrums() Temporary storage of collDBUserDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.
void	save() Stores the object in the database.
void	save(java.sql.Connection con) Stores the object in the database.
void	save(java.lang.String dbName) Stores the object in the database.
void	setComment(byte[] v) Set the value of Comment
void	setCommentSoundex(java.lang.String v) Set the value of CommentSoundex
void	setDate(java.util.Date v) Set the value of Date
void	setDBMolecule(DBMolecule v) Declares an association between this object and a DBMolecule object
void	setDBMoleculeKey(org.apache.torque.om.ObjectKey key) Provides convenient way to set a relationship based on a ObjectKey.
void	setDBSpectrumType(DBSpectrumType v) Declares an association between this object and a DBSpectrumType object
void	setDBSpectrumTypeKey(org.apache.torque.om.ObjectKey key) Provides convenient way to set a relationship based on a ObjectKey.
void	setFingerprint(long v) Set the value of Fingerprint
void	setLiterature(java.lang.String v) Set the value of Literature
void	setLiteratureSoundex(java.lang.String v) Set the value of LiteratureSoundex
void	setMoleculeId(int v) Set the value of MoleculeId
void	setNmrshiftdbUser(NmrshiftdbUser v) Declares an association between this object and a NmrshiftdbUser object
void	setNmrshiftdbUserKey(org.apache.torque.om.ObjectKey key) Provides convenient way to set a relationship based on a ObjectKey.
void	setPrimaryKey(org.apache.torque.om.ObjectKey key) Set the PrimaryKey using ObjectKey.
void	setPrimaryKey(java.lang.String key) Set the PrimaryKey using a String.
void	setReviewFlag(java.lang.String v) Set the value of ReviewFlag
void	setReviewKey(java.lang.String v) Set the value of ReviewKey
void	setSimpleSpecfile(java.lang.String v) Set the value of SimpleSpecfile
void	setSpecfile(java.lang.String v) Set the value of Specfile
void	setSpectrumId(int v) Set the value of SpectrumId
void	setSpectrumTypeId(int v) Set the value of SpectrumTypeId
void	setUserId(int v) Set the value of UserId
java.lang.String	toString()

Methods inherited from class org.apache.torque.om.BaseObject

equals, equals, getLog, hashCode, isModified, isNew, log, resetModified, setModified, setNew, setPrimaryKey

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

peer

private static final DBSpectrumPeer peer

The Peer class

spectrumId

private int spectrumId

The value for the spectrumId field

date

private java.util.Date date

The value for the date field

specfile

private java.lang.String specfile

The value for the specfile field

simpleSpecfile

private java.lang.String simpleSpecfile

The value for the simpleSpecfile field

literature

private java.lang.String literature

The value for the literature field

literatureSoundex

private java.lang.String literatureSoundex

The value for the literatureSoundex field

reviewFlag

private java.lang.String reviewFlag

The value for the reviewFlag field

reviewKey

private java.lang.String reviewKey

The value for the reviewKey field

fingerprint

private long fingerprint

The value for the fingerprint field

userId

private int userId

The value for the userId field

spectrumTypeId

private int spectrumTypeId

The value for the spectrumTypeId field

comment

private byte[] comment

The value for the comment field

commentSoundex

private java.lang.String commentSoundex

The value for the commentSoundex field

moleculeId

private int moleculeId

The value for the moleculeId field

aNmrshiftdbUser

private NmrshiftdbUser aNmrshiftdbUser

aDBSpectrumType

private DBSpectrumType aDBSpectrumType

aDBMolecule

private DBMolecule aDBMolecule

collDBSpectrumDBConditions

protected java.util.List collDBSpectrumDBConditions

Collection to store aggregation of collDBSpectrumDBConditions

lastDBSpectrumDBConditionsCriteria

private org.apache.torque.util.Criteria lastDBSpectrumDBConditionsCriteria

The criteria used to select the current contents of collDBSpectrumDBConditions

collDBCouplings

protected java.util.List collDBCouplings

Collection to store aggregation of collDBCouplings

lastDBCouplingsCriteria

private org.apache.torque.util.Criteria lastDBCouplingsCriteria

The criteria used to select the current contents of collDBCouplings

collDBSignals

protected java.util.List collDBSignals

Collection to store aggregation of collDBSignals

lastDBSignalsCriteria

private org.apache.torque.util.Criteria lastDBSignalsCriteria

The criteria used to select the current contents of collDBSignals

collDBUserDBSpectrums

protected java.util.List collDBUserDBSpectrums

Collection to store aggregation of collDBUserDBSpectrums

lastDBUserDBSpectrumsCriteria

private org.apache.torque.util.Criteria lastDBUserDBSpectrumsCriteria

The criteria used to select the current contents of collDBUserDBSpectrums

collDBUserDBSpectrumEdits

protected java.util.List collDBUserDBSpectrumEdits

Collection to store aggregation of collDBUserDBSpectrumEdits

lastDBUserDBSpectrumEditsCriteria

private org.apache.torque.util.Criteria lastDBUserDBSpectrumEditsCriteria

The criteria used to select the current contents of collDBUserDBSpectrumEdits

collDBUserDBSpectrumMarks

protected java.util.List collDBUserDBSpectrumMarks

Collection to store aggregation of collDBUserDBSpectrumMarks

lastDBUserDBSpectrumMarksCriteria

private org.apache.torque.util.Criteria lastDBUserDBSpectrumMarksCriteria

The criteria used to select the current contents of collDBUserDBSpectrumMarks

collDBSpectrumHyperlinks

protected java.util.List collDBSpectrumHyperlinks

Collection to store aggregation of collDBSpectrumHyperlinks

lastDBSpectrumHyperlinksCriteria

private org.apache.torque.util.Criteria lastDBSpectrumHyperlinksCriteria

The criteria used to select the current contents of collDBSpectrumHyperlinks

collDBSpectrumDBKeywords

protected java.util.List collDBSpectrumDBKeywords

Collection to store aggregation of collDBSpectrumDBKeywords

lastDBSpectrumDBKeywordsCriteria

private org.apache.torque.util.Criteria lastDBSpectrumDBKeywordsCriteria

The criteria used to select the current contents of collDBSpectrumDBKeywords

collDBSpectrumDBLiteratures

protected java.util.List collDBSpectrumDBLiteratures

Collection to store aggregation of collDBSpectrumDBLiteratures

lastDBSpectrumDBLiteraturesCriteria

private org.apache.torque.util.Criteria lastDBSpectrumDBLiteraturesCriteria

The criteria used to select the current contents of collDBSpectrumDBLiteratures

collDBRawFileDBSpectrums

protected java.util.List collDBRawFileDBSpectrums

Collection to store aggregation of collDBRawFileDBSpectrums

lastDBRawFileDBSpectrumsCriteria

private org.apache.torque.util.Criteria lastDBRawFileDBSpectrumsCriteria

The criteria used to select the current contents of collDBRawFileDBSpectrums

fieldNames

private static java.util.List fieldNames

alreadyInSave

private boolean alreadyInSave

flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.

Constructor Detail

BaseDBSpectrum

public BaseDBSpectrum()

Method Detail

getSpectrumId

public int getSpectrumId()

Get the SpectrumId

Returns:

int

setSpectrumId

public void setSpectrumId(int v)
                   throws org.apache.torque.TorqueException

Set the value of SpectrumId

Parameters:

v - new value

Throws:

org.apache.torque.TorqueException

getDate

public java.util.Date getDate()

Get the Date

Returns:

Date

setDate

public void setDate(java.util.Date v)

Set the value of Date

Parameters:

v - new value

getSpecfile

public java.lang.String getSpecfile()

Get the Specfile

Returns:

String

setSpecfile

public void setSpecfile(java.lang.String v)

Set the value of Specfile

Parameters:

v - new value

getSimpleSpecfile

public java.lang.String getSimpleSpecfile()

Get the SimpleSpecfile

Returns:

String

setSimpleSpecfile

public void setSimpleSpecfile(java.lang.String v)

Set the value of SimpleSpecfile

Parameters:

v - new value

getLiterature

public java.lang.String getLiterature()

Get the Literature

Returns:

String

setLiterature

public void setLiterature(java.lang.String v)

Set the value of Literature

Parameters:

v - new value

getLiteratureSoundex

public java.lang.String getLiteratureSoundex()

Get the LiteratureSoundex

Returns:

String

setLiteratureSoundex

public void setLiteratureSoundex(java.lang.String v)

Set the value of LiteratureSoundex

Parameters:

v - new value

getReviewFlag

public java.lang.String getReviewFlag()

Get the ReviewFlag

Returns:

String

setReviewFlag

public void setReviewFlag(java.lang.String v)

Set the value of ReviewFlag

Parameters:

v - new value

getReviewKey

public java.lang.String getReviewKey()

Get the ReviewKey

Returns:

String

setReviewKey

public void setReviewKey(java.lang.String v)

Set the value of ReviewKey

Parameters:

v - new value

getFingerprint

public long getFingerprint()

Get the Fingerprint

Returns:

long

setFingerprint

public void setFingerprint(long v)

Set the value of Fingerprint

Parameters:

v - new value

getUserId

public int getUserId()

Get the UserId

Returns:

int

setUserId

public void setUserId(int v)
               throws org.apache.torque.TorqueException

Set the value of UserId

Parameters:

v - new value

Throws:

org.apache.torque.TorqueException

getSpectrumTypeId

public int getSpectrumTypeId()

Get the SpectrumTypeId

Returns:

int

setSpectrumTypeId

public void setSpectrumTypeId(int v)
                       throws org.apache.torque.TorqueException

Set the value of SpectrumTypeId

Parameters:

v - new value

Throws:

org.apache.torque.TorqueException

getComment

public byte[] getComment()

Get the Comment

Returns:

byte[]

setComment

public void setComment(byte[] v)

Set the value of Comment

Parameters:

v - new value

getCommentSoundex

public java.lang.String getCommentSoundex()

Get the CommentSoundex

Returns:

String

setCommentSoundex

public void setCommentSoundex(java.lang.String v)

Set the value of CommentSoundex

Parameters:

v - new value

getMoleculeId

public int getMoleculeId()

Get the MoleculeId

Returns:

int

setMoleculeId

public void setMoleculeId(int v)
                   throws org.apache.torque.TorqueException

Set the value of MoleculeId

Parameters:

v - new value

Throws:

org.apache.torque.TorqueException

setNmrshiftdbUser

public void setNmrshiftdbUser(NmrshiftdbUser v)
                       throws org.apache.torque.TorqueException

Declares an association between this object and a NmrshiftdbUser object

Parameters:

v - NmrshiftdbUser

Throws:

org.apache.torque.TorqueException

getNmrshiftdbUser

public NmrshiftdbUser getNmrshiftdbUser()
                                 throws org.apache.torque.TorqueException

Get the associated NmrshiftdbUser object

Returns:

the associated NmrshiftdbUser object

Throws:

org.apache.torque.TorqueException

setNmrshiftdbUserKey

public void setNmrshiftdbUserKey(org.apache.torque.om.ObjectKey key)
                          throws org.apache.torque.TorqueException

Provides convenient way to set a relationship based on a ObjectKey. e.g. bar.setFooKey(foo.getPrimaryKey())

Throws:

org.apache.torque.TorqueException

setDBSpectrumType

public void setDBSpectrumType(DBSpectrumType v)
                       throws org.apache.torque.TorqueException

Declares an association between this object and a DBSpectrumType object

Parameters:

v - DBSpectrumType

Throws:

org.apache.torque.TorqueException

getDBSpectrumType

public DBSpectrumType getDBSpectrumType()
                                 throws org.apache.torque.TorqueException

Get the associated DBSpectrumType object

Returns:

the associated DBSpectrumType object

Throws:

org.apache.torque.TorqueException

setDBSpectrumTypeKey

public void setDBSpectrumTypeKey(org.apache.torque.om.ObjectKey key)
                          throws org.apache.torque.TorqueException

Provides convenient way to set a relationship based on a ObjectKey. e.g. bar.setFooKey(foo.getPrimaryKey())

Throws:

org.apache.torque.TorqueException

setDBMolecule

public void setDBMolecule(DBMolecule v)
                   throws org.apache.torque.TorqueException

Declares an association between this object and a DBMolecule object

Parameters:

v - DBMolecule

Throws:

org.apache.torque.TorqueException

getDBMolecule

public DBMolecule getDBMolecule()
                         throws org.apache.torque.TorqueException

Get the associated DBMolecule object

Returns:

the associated DBMolecule object

Throws:

org.apache.torque.TorqueException

setDBMoleculeKey

public void setDBMoleculeKey(org.apache.torque.om.ObjectKey key)
                      throws org.apache.torque.TorqueException

Provides convenient way to set a relationship based on a ObjectKey. e.g. bar.setFooKey(foo.getPrimaryKey())

Throws:

org.apache.torque.TorqueException

initDBSpectrumDBConditions

protected void initDBSpectrumDBConditions()

Temporary storage of collDBSpectrumDBConditions to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBSpectrumDBCondition

public void addDBSpectrumDBCondition(DBSpectrumDBCondition l)
                              throws org.apache.torque.TorqueException

Method called to associate a DBSpectrumDBCondition object to this object through the DBSpectrumDBCondition foreign key attribute

Parameters:

l - DBSpectrumDBCondition

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBConditions

public java.util.List getDBSpectrumDBConditions()
                                         throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrumDBConditions(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBConditions

public java.util.List getDBSpectrumDBConditions(org.apache.torque.util.Criteria criteria)
                                         throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBConditions from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBConditions

public java.util.List getDBSpectrumDBConditions(java.sql.Connection con)
                                         throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrumDBConditions(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBConditions

public java.util.List getDBSpectrumDBConditions(org.apache.torque.util.Criteria criteria,
                                                java.sql.Connection con)
                                         throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBConditions from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBConditionsJoinDBSpectrum

protected java.util.List getDBSpectrumDBConditionsJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                                          throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBConditions from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBConditionsJoinDBCondition

protected java.util.List getDBSpectrumDBConditionsJoinDBCondition(org.apache.torque.util.Criteria criteria)
                                                           throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBConditions from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBCouplings

protected void initDBCouplings()

Temporary storage of collDBCouplings to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBCoupling

public void addDBCoupling(DBCoupling l)
                   throws org.apache.torque.TorqueException

Method called to associate a DBCoupling object to this object through the DBCoupling foreign key attribute

Parameters:

l - DBCoupling

Throws:

org.apache.torque.TorqueException

getDBCouplings

public java.util.List getDBCouplings()
                              throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBCouplings(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBCouplings

public java.util.List getDBCouplings(org.apache.torque.util.Criteria criteria)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBCouplings from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBCouplings

public java.util.List getDBCouplings(java.sql.Connection con)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBCouplings(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBCouplings

public java.util.List getDBCouplings(org.apache.torque.util.Criteria criteria,
                                     java.sql.Connection con)
                              throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBCouplings from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBCouplingsJoinDBAtomRelatedByAtomId1

protected java.util.List getDBCouplingsJoinDBAtomRelatedByAtomId1(org.apache.torque.util.Criteria criteria)
                                                           throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBCouplings from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBCouplingsJoinDBAtomRelatedByAtomId2

protected java.util.List getDBCouplingsJoinDBAtomRelatedByAtomId2(org.apache.torque.util.Criteria criteria)
                                                           throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBCouplings from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBCouplingsJoinDBSpectrum

protected java.util.List getDBCouplingsJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                               throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBCouplings from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBSignals

protected void initDBSignals()

Temporary storage of collDBSignals to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBSignal

public void addDBSignal(DBSignal l)
                 throws org.apache.torque.TorqueException

Method called to associate a DBSignal object to this object through the DBSignal foreign key attribute

Parameters:

l - DBSignal

Throws:

org.apache.torque.TorqueException

getDBSignals

public java.util.List getDBSignals()
                            throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSignals(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBSignals

public java.util.List getDBSignals(org.apache.torque.util.Criteria criteria)
                            throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSignals from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBSignals

public java.util.List getDBSignals(java.sql.Connection con)
                            throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSignals(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSignals

public java.util.List getDBSignals(org.apache.torque.util.Criteria criteria,
                                   java.sql.Connection con)
                            throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSignals from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSignalsJoinDBSpectrum

protected java.util.List getDBSignalsJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                             throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBSignals from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBUserDBSpectrums

protected void initDBUserDBSpectrums()

Temporary storage of collDBUserDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBUserDBSpectrum

public void addDBUserDBSpectrum(DBUserDBSpectrum l)
                         throws org.apache.torque.TorqueException

Method called to associate a DBUserDBSpectrum object to this object through the DBUserDBSpectrum foreign key attribute

Parameters:

l - DBUserDBSpectrum

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrums

public java.util.List getDBUserDBSpectrums()
                                    throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBUserDBSpectrums(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrums

public java.util.List getDBUserDBSpectrums(org.apache.torque.util.Criteria criteria)
                                    throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrums from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrums

public java.util.List getDBUserDBSpectrums(java.sql.Connection con)
                                    throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBUserDBSpectrums(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrums

public java.util.List getDBUserDBSpectrums(org.apache.torque.util.Criteria criteria,
                                           java.sql.Connection con)
                                    throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrums from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumsJoinNmrshiftdbUser

protected java.util.List getDBUserDBSpectrumsJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria)
                                                         throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrums from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumsJoinDBSpectrum

protected java.util.List getDBUserDBSpectrumsJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                                     throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrums from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBUserDBSpectrumEdits

protected void initDBUserDBSpectrumEdits()

Temporary storage of collDBUserDBSpectrumEdits to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBUserDBSpectrumEdit

public void addDBUserDBSpectrumEdit(DBUserDBSpectrumEdit l)
                             throws org.apache.torque.TorqueException

Method called to associate a DBUserDBSpectrumEdit object to this object through the DBUserDBSpectrumEdit foreign key attribute

Parameters:

l - DBUserDBSpectrumEdit

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumEdits

public java.util.List getDBUserDBSpectrumEdits()
                                        throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBUserDBSpectrumEdits(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumEdits

public java.util.List getDBUserDBSpectrumEdits(org.apache.torque.util.Criteria criteria)
                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrumEdits from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumEdits

public java.util.List getDBUserDBSpectrumEdits(java.sql.Connection con)
                                        throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBUserDBSpectrumEdits(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumEdits

public java.util.List getDBUserDBSpectrumEdits(org.apache.torque.util.Criteria criteria,
                                               java.sql.Connection con)
                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrumEdits from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumEditsJoinNmrshiftdbUser

protected java.util.List getDBUserDBSpectrumEditsJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria)
                                                             throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrumEdits from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumEditsJoinDBSpectrum

protected java.util.List getDBUserDBSpectrumEditsJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                                         throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrumEdits from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBUserDBSpectrumMarks

protected void initDBUserDBSpectrumMarks()

Temporary storage of collDBUserDBSpectrumMarks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBUserDBSpectrumMark

public void addDBUserDBSpectrumMark(DBUserDBSpectrumMark l)
                             throws org.apache.torque.TorqueException

Method called to associate a DBUserDBSpectrumMark object to this object through the DBUserDBSpectrumMark foreign key attribute

Parameters:

l - DBUserDBSpectrumMark

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumMarks

public java.util.List getDBUserDBSpectrumMarks()
                                        throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBUserDBSpectrumMarks(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumMarks

public java.util.List getDBUserDBSpectrumMarks(org.apache.torque.util.Criteria criteria)
                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrumMarks from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumMarks

public java.util.List getDBUserDBSpectrumMarks(java.sql.Connection con)
                                        throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBUserDBSpectrumMarks(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumMarks

public java.util.List getDBUserDBSpectrumMarks(org.apache.torque.util.Criteria criteria,
                                               java.sql.Connection con)
                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrumMarks from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumMarksJoinNmrshiftdbUser

protected java.util.List getDBUserDBSpectrumMarksJoinNmrshiftdbUser(org.apache.torque.util.Criteria criteria)
                                                             throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrumMarks from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBUserDBSpectrumMarksJoinDBSpectrum

protected java.util.List getDBUserDBSpectrumMarksJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                                         throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBUserDBSpectrumMarks from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBSpectrumHyperlinks

protected void initDBSpectrumHyperlinks()

Temporary storage of collDBSpectrumHyperlinks to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBSpectrumHyperlink

public void addDBSpectrumHyperlink(DBSpectrumHyperlink l)
                            throws org.apache.torque.TorqueException

Method called to associate a DBSpectrumHyperlink object to this object through the DBSpectrumHyperlink foreign key attribute

Parameters:

l - DBSpectrumHyperlink

Throws:

org.apache.torque.TorqueException

getDBSpectrumHyperlinks

public java.util.List getDBSpectrumHyperlinks()
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrumHyperlinks(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBSpectrumHyperlinks

public java.util.List getDBSpectrumHyperlinks(org.apache.torque.util.Criteria criteria)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumHyperlinks from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBSpectrumHyperlinks

public java.util.List getDBSpectrumHyperlinks(java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrumHyperlinks(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumHyperlinks

public java.util.List getDBSpectrumHyperlinks(org.apache.torque.util.Criteria criteria,
                                              java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumHyperlinks from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumHyperlinksJoinDBSpectrum

protected java.util.List getDBSpectrumHyperlinksJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumHyperlinks from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBSpectrumDBKeywords

protected void initDBSpectrumDBKeywords()

Temporary storage of collDBSpectrumDBKeywords to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBSpectrumDBKeyword

public void addDBSpectrumDBKeyword(DBSpectrumDBKeyword l)
                            throws org.apache.torque.TorqueException

Method called to associate a DBSpectrumDBKeyword object to this object through the DBSpectrumDBKeyword foreign key attribute

Parameters:

l - DBSpectrumDBKeyword

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBKeywords

public java.util.List getDBSpectrumDBKeywords()
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrumDBKeywords(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBKeywords

public java.util.List getDBSpectrumDBKeywords(org.apache.torque.util.Criteria criteria)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBKeywords from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBKeywords

public java.util.List getDBSpectrumDBKeywords(java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrumDBKeywords(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBKeywords

public java.util.List getDBSpectrumDBKeywords(org.apache.torque.util.Criteria criteria,
                                              java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBKeywords from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBKeywordsJoinDBSpectrum

protected java.util.List getDBSpectrumDBKeywordsJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBKeywords from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBKeywordsJoinDBKeyword

protected java.util.List getDBSpectrumDBKeywordsJoinDBKeyword(org.apache.torque.util.Criteria criteria)
                                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBKeywords from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBSpectrumDBLiteratures

protected void initDBSpectrumDBLiteratures()

Temporary storage of collDBSpectrumDBLiteratures to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBSpectrumDBLiterature

public void addDBSpectrumDBLiterature(DBSpectrumDBLiterature l)
                               throws org.apache.torque.TorqueException

Method called to associate a DBSpectrumDBLiterature object to this object through the DBSpectrumDBLiterature foreign key attribute

Parameters:

l - DBSpectrumDBLiterature

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBLiteratures

public java.util.List getDBSpectrumDBLiteratures()
                                          throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrumDBLiteratures(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBLiteratures

public java.util.List getDBSpectrumDBLiteratures(org.apache.torque.util.Criteria criteria)
                                          throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBLiteratures from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBLiteratures

public java.util.List getDBSpectrumDBLiteratures(java.sql.Connection con)
                                          throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBSpectrumDBLiteratures(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBLiteratures

public java.util.List getDBSpectrumDBLiteratures(org.apache.torque.util.Criteria criteria,
                                                 java.sql.Connection con)
                                          throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBLiteratures from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBLiteraturesJoinDBSpectrum

protected java.util.List getDBSpectrumDBLiteraturesJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                                           throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBLiteratures from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBSpectrumDBLiteraturesJoinDBLiterature

protected java.util.List getDBSpectrumDBLiteraturesJoinDBLiterature(org.apache.torque.util.Criteria criteria)
                                                             throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBSpectrumDBLiteratures from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

initDBRawFileDBSpectrums

protected void initDBRawFileDBSpectrums()

Temporary storage of collDBRawFileDBSpectrums to save a possible db hit in the event objects are add to the collection, but the complete collection is never requested.

addDBRawFileDBSpectrum

public void addDBRawFileDBSpectrum(DBRawFileDBSpectrum l)
                            throws org.apache.torque.TorqueException

Method called to associate a DBRawFileDBSpectrum object to this object through the DBRawFileDBSpectrum foreign key attribute

Parameters:

l - DBRawFileDBSpectrum

Throws:

org.apache.torque.TorqueException

getDBRawFileDBSpectrums

public java.util.List getDBRawFileDBSpectrums()
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBRawFileDBSpectrums(new Criteria())

Throws:

org.apache.torque.TorqueException

getDBRawFileDBSpectrums

public java.util.List getDBRawFileDBSpectrums(org.apache.torque.util.Criteria criteria)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBRawFileDBSpectrums from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object.

Throws:

org.apache.torque.TorqueException

getDBRawFileDBSpectrums

public java.util.List getDBRawFileDBSpectrums(java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized, returns the collection. Otherwise returns the results of getDBRawFileDBSpectrums(new Criteria(),Connection) This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBRawFileDBSpectrums

public java.util.List getDBRawFileDBSpectrums(org.apache.torque.util.Criteria criteria,
                                              java.sql.Connection con)
                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum has previously been saved, it will retrieve related DBRawFileDBSpectrums from storage. If this DBSpectrum is new, it will return an empty collection or the current collection, the criteria is ignored on a new object. This method takes in the Connection also as input so that referenced objects can also be obtained using a Connection that is taken as input

Throws:

org.apache.torque.TorqueException

getDBRawFileDBSpectrumsJoinDBRawFile

protected java.util.List getDBRawFileDBSpectrumsJoinDBRawFile(org.apache.torque.util.Criteria criteria)
                                                       throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBRawFileDBSpectrums from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getDBRawFileDBSpectrumsJoinDBSpectrum

protected java.util.List getDBRawFileDBSpectrumsJoinDBSpectrum(org.apache.torque.util.Criteria criteria)
                                                        throws org.apache.torque.TorqueException

If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this DBSpectrum is new, it will return an empty collection; or if this DBSpectrum has previously been saved, it will retrieve related DBRawFileDBSpectrums from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in DBSpectrum.

Throws:

org.apache.torque.TorqueException

getFieldNames

public static java.util.List getFieldNames()

Generate a list of field names.

Returns:

a list of field names

getByName

public java.lang.Object getByName(java.lang.String name)

Retrieves a field from the object by name passed in as a String.

Overrides:

getByName in class org.apache.torque.om.BaseObject

Parameters:

name - field name

Returns:

value

getByPeerName

public java.lang.Object getByPeerName(java.lang.String name)

Retrieves a field from the object by name passed in as a String. The String must be one of the static Strings defined in this Class' Peer.

Overrides:

getByPeerName in class org.apache.torque.om.BaseObject

Parameters:

name - peer name

Returns:

value

getByPosition

public java.lang.Object getByPosition(int pos)

Retrieves a field from the object by Position as specified in the xml schema. Zero-based.

Overrides:

getByPosition in class org.apache.torque.om.BaseObject

Parameters:

pos - position in xml schema

Returns:

value

save

public void save()
          throws java.lang.Exception

Stores the object in the database. If the object is new, it inserts it; otherwise an update is performed.

Specified by:

save in interface org.apache.torque.om.Persistent

Specified by:

save in class org.apache.torque.om.BaseObject

Throws:

java.lang.Exception

save

public void save(java.lang.String dbName)
          throws org.apache.torque.TorqueException

Stores the object in the database. If the object is new, it inserts it; otherwise an update is performed. Note: this code is here because the method body is auto-generated conditionally and therefore needs to be in this file instead of in the super class, BaseObject.

Specified by:

save in interface org.apache.torque.om.Persistent

Specified by:

save in class org.apache.torque.om.BaseObject

Parameters:

dbName -

Throws:

org.apache.torque.TorqueException

save

public void save(java.sql.Connection con)
          throws org.apache.torque.TorqueException

Stores the object in the database. If the object is new, it inserts it; otherwise an update is performed. This method is meant to be used as part of a transaction, otherwise use the save() method and the connection details will be handled internally

Specified by:

save in interface org.apache.torque.om.Persistent

Specified by:

save in class org.apache.torque.om.BaseObject

Parameters:

con -

Throws:

org.apache.torque.TorqueException

setPrimaryKey

public void setPrimaryKey(org.apache.torque.om.ObjectKey key)
                   throws org.apache.torque.TorqueException

Set the PrimaryKey using ObjectKey.

Specified by:

setPrimaryKey in interface org.apache.torque.om.Persistent

Overrides:

setPrimaryKey in class org.apache.torque.om.BaseObject

Parameters:

spectrumId - ObjectKey

Throws:

org.apache.torque.TorqueException

setPrimaryKey

public void setPrimaryKey(java.lang.String key)
                   throws org.apache.torque.TorqueException

Set the PrimaryKey using a String.

Specified by:

setPrimaryKey in interface org.apache.torque.om.Persistent

Overrides:

setPrimaryKey in class org.apache.torque.om.BaseObject

Parameters:

key -

Throws:

org.apache.torque.TorqueException

getPrimaryKey

public org.apache.torque.om.ObjectKey getPrimaryKey()

returns an id that differentiates this object from others of its class.

Specified by:

getPrimaryKey in interface org.apache.torque.om.Persistent

Overrides:

getPrimaryKey in class org.apache.torque.om.BaseObject

copy

public DBSpectrum copy()
                throws org.apache.torque.TorqueException

Makes a copy of this object. It creates a new object filling in the simple attributes. It then fills all the association collections and sets the related objects to isNew=true.

Throws:

org.apache.torque.TorqueException

copyInto

protected DBSpectrum copyInto(DBSpectrum copyObj)
                       throws org.apache.torque.TorqueException

Throws:

org.apache.torque.TorqueException

getPeer

public DBSpectrumPeer getPeer()

returns a peer instance associated with this om. Since Peer classes are not to have any instance attributes, this method returns the same instance for all member of this class. The method could therefore be static, but this would prevent one from overriding the behavior.

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object